RNA–Protein interactions for RNA: ENST00000524203.1

PCM1-221, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 401 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-221ENST00000524203 PAPPAQ13219 1627 aa9.74□□□□□ -0.85
PCM1-221ENST00000524203 PIK3C2GO75747 1445 aa9.73□□□□□ -0.85
PCM1-221ENST00000524203 COL5A2P05997 1499 aaPredicted RBP9.73□□□□□ -0.85
PCM1-221ENST00000524203 POLD1P28340 1107 aa9.73□□□□□ -0.85
PCM1-221ENST00000524203 POGKQ9P215 609 aa9.73□□□□□ -0.85
PCM1-221ENST00000524203 CRB1P82279 1406 aa9.73□□□□□ -0.85
PCM1-221ENST00000524203 MINK1Q8N4C8 1332 aaPredicted RBP9.72□□□□□ -0.85
PCM1-221ENST00000524203 AKAP12Q02952 1782 aa9.72□□□□□ -0.85
PCM1-221ENST00000524203 AATKQ6ZMQ8 1374 aa9.72□□□□□ -0.85
PCM1-221ENST00000524203 ZBTB7CA1YPR0 619 aa9.71□□□□□ -0.86
PCM1-221ENST00000524203 CFAP70Q5T0N1 1121 aa9.71□□□□□ -0.86
PCM1-221ENST00000524203 TULP4Q9NRJ4 1543 aa9.71□□□□□ -0.86
PCM1-221ENST00000524203 COL24A1Q17RW2 1714 aa9.7□□□□□ -0.86
PCM1-221ENST00000524203 LRRC4BQ9NT99 713 aa9.7□□□□□ -0.86
PCM1-221ENST00000524203 CPDO75976 1380 aa9.7□□□□□ -0.86
PCM1-221ENST00000524203 ANKRD30BQ9BXX2 1392 aa9.7□□□□□ -0.86
PCM1-221ENST00000524203 BCL9O00512 1426 aa9.7□□□□□ -0.86
PCM1-221ENST00000524203 WDR90Q96KV7 1748 aa9.7□□□□□ -0.86
PCM1-221ENST00000524203 PNPLA7Q6ZV29 1317 aa9.69□□□□□ -0.86
PCM1-221ENST00000524203 JMYQ8N9B5 988 aa9.69□□□□□ -0.86
PCM1-221ENST00000524203 KLRG1Q96E93 195 aa9.69□□□□□ -0.86
PCM1-221ENST00000524203 ACSBG1Q96GR2 724 aa9.69□□□□□ -0.86
PCM1-221ENST00000524203 C14orf93Q9H972 538 aaKnown RBP9.69□□□□□ -0.86
PCM1-221ENST00000524203 WWC3Q9ULE0 1092 aa9.69□□□□□ -0.86
PCM1-221ENST00000524203 WNK3Q9BYP7 1800 aa9.68□□□□□ -0.86
PCM1-221ENST00000524203 SPATA31E1Q6ZUB1 1445 aa9.68□□□□□ -0.86
PCM1-221ENST00000524203 TOM1L2Q6ZVM7 507 aa9.68□□□□□ -0.86
PCM1-221ENST00000524203 SLC16A10Q8TF71 515 aa9.68□□□□□ -0.86
PCM1-221ENST00000524203 AKT1S1Q96B36 256 aa9.68□□□□□ -0.86
PCM1-221ENST00000524203 PCNTO95613 3336 aa9.68□□□□□ -0.86
PCM1-221ENST00000524203 WASLO00401 505 aaPredicted RBP9.67□□□□□ -0.86
PCM1-221ENST00000524203 GCP02774 474 aa9.67□□□□□ -0.86
PCM1-221ENST00000524203 ABTB2Q8N961 1025 aa9.67□□□□□ -0.86
PCM1-221ENST00000524203 PCDH10Q9P2E7 1040 aa9.67□□□□□ -0.86
PCM1-221ENST00000524203 EIF3AQ14152 1382 aaKnown RBP9.66□□□□□ -0.86
PCM1-221ENST00000524203 TUBGCP6Q96RT7 1819 aa9.66□□□□□ -0.86
PCM1-221ENST00000524203 USP19O94966 1318 aa9.66□□□□□ -0.86
PCM1-221ENST00000524203 TOMM70O94826 608 aa9.66□□□□□ -0.86
PCM1-221ENST00000524203 SLC4A1APQ9BWU0 796 aaKnown RBP9.66□□□□□ -0.86
PCM1-221ENST00000524203 TRAK1Q9UPV9 953 aa9.66□□□□□ -0.86
PCM1-221ENST00000524203 NHSQ6T4R5 1651 aa9.66□□□□□ -0.86
PCM1-221ENST00000524203 KCNQ4P56696 695 aa9.65□□□□□ -0.86
PCM1-221ENST00000524203 QSER1Q2KHR3 1735 aa9.65□□□□□ -0.87
PCM1-221ENST00000524203 ACEP12821 1306 aa9.64□□□□□ -0.87
PCM1-221ENST00000524203 BTAF1O14981 1849 aa9.64□□□□□ -0.87
PCM1-221ENST00000524203 EXOC5O00471 708 aa9.64□□□□□ -0.87
PCM1-221ENST00000524203 MSL1Q68DK7 614 aa9.64□□□□□ -0.87
PCM1-221ENST00000524203 NUDT16Q96DE0 195 aaKnown RBP9.64□□□□□ -0.87
PCM1-221ENST00000524203 TFCP2L1Q9NZI6 479 aa9.64□□□□□ -0.87
PCM1-221ENST00000524203 AXIN2Q9Y2T1 843 aa9.64□□□□□ -0.87
PCM1-221ENST00000524203 ARHGEF28Q8N1W1 1705 aaKnown RBP9.64□□□□□ -0.87
PCM1-221ENST00000524203 ITSN1Q15811 1721 aa9.63□□□□□ -0.87
PCM1-221ENST00000524203 USP6P35125 1406 aa9.63□□□□□ -0.87
PCM1-221ENST00000524203 BRD4O60885 1362 aaPredicted RBP9.63□□□□□ -0.87
PCM1-221ENST00000524203 WDR17Q8IZU2 1322 aa9.62□□□□□ -0.87
PCM1-221ENST00000524203 MSH5O43196 834 aa9.62□□□□□ -0.87
PCM1-221ENST00000524203 HSPA1AP0DMV8 641 aaKnown RBP9.62□□□□□ -0.87
PCM1-221ENST00000524203 HSPA1BP0DMV9 641 aaKnown RBP9.62□□□□□ -0.87
PCM1-221ENST00000524203 CDCA7Q9BWT1 371 aaPredicted RBP9.62□□□□□ -0.87
PCM1-221ENST00000524203 NMRK2Q9NPI5 230 aa9.62□□□□□ -0.87
PCM1-221ENST00000524203 NLRP13Q86W25 1043 aa9.61□□□□□ -0.87
PCM1-221ENST00000524203 POLR3AO14802 1390 aaPredicted RBP9.61□□□□□ -0.87
PCM1-221ENST00000524203 COL18A1P39060 1754 aa9.6□□□□□ -0.87
PCM1-221ENST00000524203 TNS2Q63HR2 1409 aa9.6□□□□□ -0.87
PCM1-221ENST00000524203 ADGRB1O14514 1584 aa9.59□□□□□ -0.87
PCM1-221ENST00000524203 COL23A1Q86Y22 540 aaPredicted RBP9.59□□□□□ -0.87
PCM1-221ENST00000524203 CARD10Q9BWT7 1032 aa9.59□□□□□ -0.87
PCM1-221ENST00000524203 CD2APQ9Y5K6 639 aa9.59□□□□□ -0.87
PCM1-221ENST00000524203 IGSF1Q8N6C5 1336 aa9.58□□□□□ -0.88
PCM1-221ENST00000524203 RGPD5Q99666 1765 aa9.58□□□□□ -0.88
PCM1-221ENST00000524203 CSB-PGBD3P0DP91 1061 aa9.58□□□□□ -0.88
PCM1-221ENST00000524203 SLC27A3Q5K4L6 730 aa9.58□□□□□ -0.88
PCM1-221ENST00000524203 RBM46Q8TBY0 533 aaKnown RBP9.58□□□□□ -0.88
PCM1-221ENST00000524203 FAM161AQ3B820 660 aa9.57□□□□□ -0.88
PCM1-221ENST00000524203 CDK19Q9BWU1 502 aa9.57□□□□□ -0.88
PCM1-221ENST00000524203 ABCC6O95255 1503 aa9.56□□□□□ -0.88
PCM1-221ENST00000524203 PLEKHG3A1L390 1219 aa9.56□□□□□ -0.88
PCM1-221ENST00000524203 NLRP6P59044 892 aa9.56□□□□□ -0.88
PCM1-221ENST00000524203 C16orf71Q8IYS4 520 aaPredicted RBP9.56□□□□□ -0.88
PCM1-221ENST00000524203 TRPM1Q7Z4N2 1603 aa9.56□□□□□ -0.88
PCM1-221ENST00000524203 SLIT3O75094 1523 aa9.56□□□□□ -0.88
PCM1-221ENST00000524203 PPIP5K1Q6PFW1 1433 aa9.56□□□□□ -0.88
PCM1-221ENST00000524203 KAT6BQ8WYB5 2073 aa9.55□□□□□ -0.88
PCM1-221ENST00000524203 CPSF1Q10570 1443 aaKnown RBP9.55□□□□□ -0.88
PCM1-221ENST00000524203 SOX12O15370 315 aa9.54□□□□□ -0.88
PCM1-221ENST00000524203 FSTL1Q12841 308 aa9.54□□□□□ -0.88
PCM1-221ENST00000524203 CCDC61Q9Y6R9 512 aa9.54□□□□□ -0.88
PCM1-221ENST00000524203 CICQ96RK0 1608 aaPredicted RBP9.53□□□□□ -0.88
PCM1-221ENST00000524203 CCDC7Q96M83 1385 aa9.53□□□□□ -0.88
PCM1-221ENST00000524203 ARHGEF25Q86VW2 580 aa9.53□□□□□ -0.88
PCM1-221ENST00000524203 PPARGC1BQ86YN6 1023 aaKnown RBP9.53□□□□□ -0.88
PCM1-221ENST00000524203 PIK3C2AO00443 1686 aa9.52□□□□□ -0.89
PCM1-221ENST00000524203 SYTL4Q96C24 671 aaPredicted RBP9.52□□□□□ -0.89
PCM1-221ENST00000524203 CCNL1Q9UK58 526 aaPredicted RBP9.51□□□□□ -0.89
PCM1-221ENST00000524203 LY75O60449 1722 aa9.51□□□□□ -0.89
PCM1-221ENST00000524203 IL2RBP14784 551 aa9.5□□□□□ -0.89
PCM1-221ENST00000524203 PRIM1P49642 420 aaKnown RBP9.5□□□□□ -0.89
PCM1-221ENST00000524203 SMIM5Q71RC9 77 aa9.5□□□□□ -0.89
PCM1-221ENST00000524203 DDX54Q8TDD1 881 aaKnown RBP9.5□□□□□ -0.89
PCM1-221ENST00000524203 RRAGCQ9HB90 399 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms