RNA–Protein interactions for RNA: ENST00000524115.2

NKX6-3-202, Transcript of NK6 homeobox 3, humanhuman

TSL 2 BASIC

Gene NKX6-3, Length 1,683 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-3-202ENST00000524115 TNS3Q68CZ2 1445 aa29.08■■■□□ 2.25
NKX6-3-202ENST00000524115 LMOD2Q6P5Q4 547 aa29.08■■■□□ 2.25
NKX6-3-202ENST00000524115 FNBP4Q8N3X1 1017 aaPredicted RBP29.07■■■□□ 2.24
NKX6-3-202ENST00000524115 CABP2Q9NPB3 220 aa29.05■■■□□ 2.24
NKX6-3-202ENST00000524115 USP21Q9UK80 565 aa29.05■■■□□ 2.24
NKX6-3-202ENST00000524115 CCDC61Q9Y6R9 512 aa29.05■■■□□ 2.24
NKX6-3-202ENST00000524115 ATP7BP35670 1465 aa29.04■■■□□ 2.24
NKX6-3-202ENST00000524115 SPINK5Q9NQ38 1064 aaPredicted RBP29.04■■■□□ 2.24
NKX6-3-202ENST00000524115 SRPK2P78362 688 aaKnown RBP29.03■■■□□ 2.24
NKX6-3-202ENST00000524115 TCP11L2Q8N4U5 519 aa29.03■■■□□ 2.24
NKX6-3-202ENST00000524115 CABLES1Q8TDN4 633 aa29.03■■■□□ 2.24
NKX6-3-202ENST00000524115 ARHGEF10O15013 1369 aa29.03■■■□□ 2.24
NKX6-3-202ENST00000524115 PLEKHG5O94827 1062 aa29.02■■■□□ 2.24
NKX6-3-202ENST00000524115 ANKRD26Q9UPS8 1709 aa29.01■■■□□ 2.24
NKX6-3-202ENST00000524115 A0A1W2PP64 1363 aa29.01■■■□□ 2.23
NKX6-3-202ENST00000524115 HAP1P54257 671 aaPredicted RBP29■■■□□ 2.23
NKX6-3-202ENST00000524115 HDGFL2Q7Z4V5 671 aaPredicted RBP29■■■□□ 2.23
NKX6-3-202ENST00000524115 MYH16Q9H6N6 1097 aa29■■■□□ 2.23
NKX6-3-202ENST00000524115 TNNT2P45379 298 aaPredicted RBP28.99■■■□□ 2.23
NKX6-3-202ENST00000524115 RBM6P78332 1123 aaKnown RBP28.99■■■□□ 2.23
NKX6-3-202ENST00000524115 PLEKHG3A1L390 1219 aa28.99■■■□□ 2.23
NKX6-3-202ENST00000524115 CT47B1P0C2W7 299 aaPredicted RBP28.99■■■□□ 2.23
NKX6-3-202ENST00000524115 PNNQ9H307 717 aaKnown RBP28.99■■■□□ 2.23
NKX6-3-202ENST00000524115 DDRGK1Q96HY6 314 aa28.98■■■□□ 2.23
NKX6-3-202ENST00000524115 PAK3O75914 559 aaPredicted RBP28.97■■■□□ 2.23
NKX6-3-202ENST00000524115 TRPC5Q9UL62 973 aaPredicted RBP28.97■■■□□ 2.23
NKX6-3-202ENST00000524115 ACEP12821 1306 aa28.96■■■□□ 2.23
NKX6-3-202ENST00000524115 BCAR3O75815 825 aa28.95■■■□□ 2.22
NKX6-3-202ENST00000524115 CANXP27824 592 aaKnown RBP28.95■■■□□ 2.22
NKX6-3-202ENST00000524115 U2AF1L5P0DN76 240 aaPredicted RBP28.93■■■□□ 2.22
NKX6-3-202ENST00000524115 U2AF1Q01081 240 aaKnown RBP eCLIP28.93■■■□□ 2.22
NKX6-3-202ENST00000524115 BCL9LQ86UU0 1499 aa28.93■■■□□ 2.22
NKX6-3-202ENST00000524115 CDK12Q9NYV4 1490 aaPredicted RBP28.92■■■□□ 2.22
NKX6-3-202ENST00000524115 ATRNO75882 1429 aa28.9■■■□□ 2.22
NKX6-3-202ENST00000524115 FAM161AQ3B820 660 aa28.89■■■□□ 2.22
NKX6-3-202ENST00000524115 UNC5CLQ8IV45 518 aa28.89■■■□□ 2.22
NKX6-3-202ENST00000524115 RARSP54136 660 aaKnown RBP28.89■■■□□ 2.21
NKX6-3-202ENST00000524115 CABP1Q9NZU7 370 aa28.89■■■□□ 2.21
NKX6-3-202ENST00000524115 CD163L1Q9NR16 1453 aa28.89■■■□□ 2.21
NKX6-3-202ENST00000524115 TRPM3Q9HCF6 1732 aaPredicted RBP28.89■■■□□ 2.21
NKX6-3-202ENST00000524115 PPIP5K1Q6PFW1 1433 aa28.88■■■□□ 2.21
NKX6-3-202ENST00000524115 COL3A1P02461 1466 aaPredicted RBP28.88■■■□□ 2.21
NKX6-3-202ENST00000524115 SLIT2O94813 1529 aa28.87■■■□□ 2.21
NKX6-3-202ENST00000524115 IL16Q14005 1332 aa28.87■■■□□ 2.21
NKX6-3-202ENST00000524115 FAM83GA6ND36 823 aa28.86■■■□□ 2.21
NKX6-3-202ENST00000524115 FYB1O15117 783 aa28.86■■■□□ 2.21
NKX6-3-202ENST00000524115 NEUROD2Q15784 382 aa28.86■■■□□ 2.21
NKX6-3-202ENST00000524115 CLUAP1Q96AJ1 413 aa28.86■■■□□ 2.21
NKX6-3-202ENST00000524115 ITSN1Q15811 1721 aa28.85■■■□□ 2.21
NKX6-3-202ENST00000524115 MAPK8IP3Q9UPT6 1336 aa28.84■■■□□ 2.21
NKX6-3-202ENST00000524115 RGS12O14924 1447 aa28.84■■■□□ 2.21
NKX6-3-202ENST00000524115 GJD4Q96KN9 370 aaPredicted RBP28.84■■■□□ 2.21
NKX6-3-202ENST00000524115 RRP7AQ9Y3A4 280 aaKnown RBP28.84■■■□□ 2.21
NKX6-3-202ENST00000524115 NPM2Q86SE8 214 aaKnown RBP28.83■■■□□ 2.21
NKX6-3-202ENST00000524115 KIF20BQ96Q89 1820 aa28.83■■■□□ 2.21
NKX6-3-202ENST00000524115 TOPAZ1Q8N9V7 1692 aa28.83■■■□□ 2.21
NKX6-3-202ENST00000524115 NUTM2GQ5VZR2 741 aa28.83■■■□□ 2.21
NKX6-3-202ENST00000524115 ALS2Q96Q42 1657 aa28.82■■■□□ 2.2
NKX6-3-202ENST00000524115 GGNBP2Q9H3C7 697 aa28.82■■■□□ 2.2
NKX6-3-202ENST00000524115 ABTB2Q8N961 1025 aa28.8■■■□□ 2.2
NKX6-3-202ENST00000524115 PLEKHF1Q96S99 279 aa28.8■■■□□ 2.2
NKX6-3-202ENST00000524115 MARF1Q9Y4F3 1742 aaKnown RBP28.8■■■□□ 2.2
NKX6-3-202ENST00000524115 DIAPH1O60610 1272 aaKnown RBP28.8■■■□□ 2.2
NKX6-3-202ENST00000524115 TMPOP42166 694 aaKnown RBP28.77■■■□□ 2.2
NKX6-3-202ENST00000524115 UPF1Q92900 1129 aaKnown RBP eCLIP28.77■■■□□ 2.2
NKX6-3-202ENST00000524115 U2SURPO15042 1029 aaKnown RBP28.77■■■□□ 2.2
NKX6-3-202ENST00000524115 VPS72Q15906 364 aa28.77■■■□□ 2.2
NKX6-3-202ENST00000524115 BTG4Q9NY30 223 aa28.76■■■□□ 2.19
NKX6-3-202ENST00000524115 FRAT1Q92837 279 aaPredicted RBP28.75■■■□□ 2.19
NKX6-3-202ENST00000524115 FCHSD2O94868 740 aa28.74■■■□□ 2.19
NKX6-3-202ENST00000524115 PRDM11Q9NQV5 511 aa28.74■■■□□ 2.19
NKX6-3-202ENST00000524115 COG6Q9Y2V7 657 aa28.74■■■□□ 2.19
NKX6-3-202ENST00000524115 ABCA3Q99758 1704 aa28.74■■■□□ 2.19
NKX6-3-202ENST00000524115 PPM1GO15355 546 aaPredicted RBP28.74■■■□□ 2.19
NKX6-3-202ENST00000524115 NEFMP07197 916 aa28.74■■■□□ 2.19
NKX6-3-202ENST00000524115 PANK1Q8TE04 598 aa28.74■■■□□ 2.19
NKX6-3-202ENST00000524115 USP6P35125 1406 aa28.73■■■□□ 2.19
NKX6-3-202ENST00000524115 RTL5Q5HYW3 569 aaPredicted RBP28.73■■■□□ 2.19
NKX6-3-202ENST00000524115 EDC4Q6P2E9 1401 aaKnown RBP28.72■■■□□ 2.19
NKX6-3-202ENST00000524115 ZC3H6P61129 1189 aaKnown RBP28.72■■■□□ 2.19
NKX6-3-202ENST00000524115 ZKSCAN2Q63HK3 967 aa28.72■■■□□ 2.19
NKX6-3-202ENST00000524115 ZNF692Q9BU19 519 aaPredicted RBP28.72■■■□□ 2.19
NKX6-3-202ENST00000524115 CCDC9Q9Y3X0 531 aaKnown RBP28.72■■■□□ 2.19
NKX6-3-202ENST00000524115 C8orf34Q49A92 452 aa28.71■■■□□ 2.19
NKX6-3-202ENST00000524115 KIAA0232Q92628 1395 aa28.71■■■□□ 2.19
NKX6-3-202ENST00000524115 RWDD1Q9H446 243 aaPredicted RBP28.7■■■□□ 2.18
NKX6-3-202ENST00000524115 USP35Q9P2H5 1018 aa28.7■■■□□ 2.18
NKX6-3-202ENST00000524115 USP19O94966 1318 aa28.69■■■□□ 2.18
NKX6-3-202ENST00000524115 CHRNA2Q15822 529 aa28.69■■■□□ 2.18
NKX6-3-202ENST00000524115 IGHDP01880 384 aa28.68■■■□□ 2.18
NKX6-3-202ENST00000524115 CPSF1Q10570 1443 aaKnown RBP28.68■■■□□ 2.18
NKX6-3-202ENST00000524115 SSH2Q76I76 1423 aa28.68■■■□□ 2.18
NKX6-3-202ENST00000524115 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.68■■■□□ 2.18
NKX6-3-202ENST00000524115 ZNF428Q96B54 188 aa28.67■■■□□ 2.18
NKX6-3-202ENST00000524115 RGS3P49796 1198 aa28.67■■■□□ 2.18
NKX6-3-202ENST00000524115 NLRP6P59044 892 aa28.67■■■□□ 2.18
NKX6-3-202ENST00000524115 CALD1Q05682 793 aaKnown RBP28.67■■■□□ 2.18
NKX6-3-202ENST00000524115 TRIM35Q9UPQ4 493 aa28.67■■■□□ 2.18
NKX6-3-202ENST00000524115 GCP02774 474 aa28.66■■■□□ 2.18
NKX6-3-202ENST00000524115 MVPQ14764 893 aaKnown RBP28.66■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms