RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-223ENST00000523636 TRIM66O15016 1216 aa8.4□□□□□ -1.06
PABPC1-223ENST00000523636 BCL2L12Q9HB09 334 aa8.4□□□□□ -1.06
PABPC1-223ENST00000523636 ARHGAP35Q9NRY4 1499 aa8.39□□□□□ -1.07
PABPC1-223ENST00000523636 DHX29Q7Z478 1369 aaKnown RBP8.39□□□□□ -1.07
PABPC1-223ENST00000523636 FECHP22830 423 aa8.39□□□□□ -1.07
PABPC1-223ENST00000523636 CCDC102AQ96A19 550 aa8.39□□□□□ -1.07
PABPC1-223ENST00000523636 PODXL2Q9NZ53 605 aa8.39□□□□□ -1.07
PABPC1-223ENST00000523636 PIK3C2BO00750 1634 aa8.39□□□□□ -1.07
PABPC1-223ENST00000523636 TMEM2Q9UHN6 1383 aa8.38□□□□□ -1.07
PABPC1-223ENST00000523636 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.38□□□□□ -1.07
PABPC1-223ENST00000523636 TNS1Q9HBL0 1735 aaKnown RBP8.38□□□□□ -1.07
PABPC1-223ENST00000523636 WASHC2CQ9Y4E1 1318 aa8.38□□□□□ -1.07
PABPC1-223ENST00000523636 NEUROD2Q15784 382 aa8.38□□□□□ -1.07
PABPC1-223ENST00000523636 MARF1Q9Y4F3 1742 aaKnown RBP8.37□□□□□ -1.07
PABPC1-223ENST00000523636 NINLQ9Y2I6 1382 aa8.37□□□□□ -1.07
PABPC1-223ENST00000523636 GJD4Q96KN9 370 aaPredicted RBP8.37□□□□□ -1.07
PABPC1-223ENST00000523636 RALGAPBQ86X10 1494 aa8.37□□□□□ -1.07
PABPC1-223ENST00000523636 KIF3BO15066 747 aa8.36□□□□□ -1.07
PABPC1-223ENST00000523636 PTPREP23469 700 aa8.36□□□□□ -1.07
PABPC1-223ENST00000523636 PDE4DQ08499 809 aa8.36□□□□□ -1.07
PABPC1-223ENST00000523636 AMHR2Q16671 573 aa8.36□□□□□ -1.07
PABPC1-223ENST00000523636 TMEM132AQ24JP5 1023 aa8.36□□□□□ -1.07
PABPC1-223ENST00000523636 TTC13Q8NBP0 860 aa8.36□□□□□ -1.07
PABPC1-223ENST00000523636 SHANK3Q9BYB0 1731 aa8.36□□□□□ -1.07
PABPC1-223ENST00000523636 CLIP1P30622 1438 aa8.36□□□□□ -1.07
PABPC1-223ENST00000523636 KIAA1107Q9UPP5 1409 aa8.36□□□□□ -1.07
PABPC1-223ENST00000523636 NCOA3Q9Y6Q9 1424 aa8.36□□□□□ -1.07
PABPC1-223ENST00000523636 LRRC59Q96AG4 307 aaKnown RBP8.35□□□□□ -1.07
PABPC1-223ENST00000523636 CEP152O94986 1710 aa8.34□□□□□ -1.07
PABPC1-223ENST00000523636 LAMC1P11047 1609 aa8.34□□□□□ -1.07
PABPC1-223ENST00000523636 COL22A1Q8NFW1 1626 aaPredicted RBP8.34□□□□□ -1.07
PABPC1-223ENST00000523636 PPP1R3GB7ZBB8 358 aa8.34□□□□□ -1.07
PABPC1-223ENST00000523636 PRSS12P56730 875 aa8.34□□□□□ -1.07
PABPC1-223ENST00000523636 COL13A1Q5TAT6 717 aaPredicted RBP8.34□□□□□ -1.07
PABPC1-223ENST00000523636 ZNF777Q9ULD5 760 aaPredicted RBP8.34□□□□□ -1.07
PABPC1-223ENST00000523636 MST1RQ04912 1400 aa8.34□□□□□ -1.07
PABPC1-223ENST00000523636 PTCH1Q13635 1447 aa8.34□□□□□ -1.07
PABPC1-223ENST00000523636 RGPD1P0DJD0 1748 aa8.34□□□□□ -1.07
PABPC1-223ENST00000523636 OATP04181 439 aa8.33□□□□□ -1.08
PABPC1-223ENST00000523636 PRELPP51888 382 aa8.33□□□□□ -1.08
PABPC1-223ENST00000523636 SF3B2Q13435 895 aaKnown RBP8.33□□□□□ -1.08
PABPC1-223ENST00000523636 PADI6Q6TGC4 694 aa8.33□□□□□ -1.08
PABPC1-223ENST00000523636 EID1Q9Y6B2 187 aa8.33□□□□□ -1.08
PABPC1-223ENST00000523636 RREB1Q92766 1687 aa8.33□□□□□ -1.08
PABPC1-223ENST00000523636 MBD5Q9P267 1494 aa8.32□□□□□ -1.08
PABPC1-223ENST00000523636 NUP188Q5SRE5 1749 aa8.32□□□□□ -1.08
PABPC1-223ENST00000523636 DISP2A7MBM2 1401 aa8.32□□□□□ -1.08
PABPC1-223ENST00000523636 GIGYF1O75420 1035 aaPredicted RBP8.32□□□□□ -1.08
PABPC1-223ENST00000523636 BAG6P46379 1132 aa8.32□□□□□ -1.08
PABPC1-223ENST00000523636 CDCA7LQ96GN5 454 aa8.32□□□□□ -1.08
PABPC1-223ENST00000523636 C19orf44Q9H6X5 657 aa8.32□□□□□ -1.08
PABPC1-223ENST00000523636 CDK11AQ9UQ88 783 aaPredicted RBP8.32□□□□□ -1.08
PABPC1-223ENST00000523636 MYOM2P54296 1465 aa8.32□□□□□ -1.08
PABPC1-223ENST00000523636 ERBB3P21860 1342 aa8.31□□□□□ -1.08
PABPC1-223ENST00000523636 ONECUT3O60422 494 aaPredicted RBP8.31□□□□□ -1.08
PABPC1-223ENST00000523636 COL9A1P20849 921 aa8.31□□□□□ -1.08
PABPC1-223ENST00000523636 EZH2Q15910 746 aaKnown RBP8.31□□□□□ -1.08
PABPC1-223ENST00000523636 CDAN1Q8IWY9 1227 aa8.3□□□□□ -1.08
PABPC1-223ENST00000523636 SEPT12Q8IYM1 358 aa8.3□□□□□ -1.08
PABPC1-223ENST00000523636 MARVELD3Q96A59 401 aa8.3□□□□□ -1.08
PABPC1-223ENST00000523636 KDM4CQ9H3R0 1056 aa8.3□□□□□ -1.08
PABPC1-223ENST00000523636 ADGRG1Q9Y653 693 aa8.3□□□□□ -1.08
PABPC1-223ENST00000523636 NRKQ7Z2Y5 1582 aa8.3□□□□□ -1.08
PABPC1-223ENST00000523636 MYOM1P52179 1685 aa8.3□□□□□ -1.08
PABPC1-223ENST00000523636 EFCAB6Q5THR3 1501 aa8.29□□□□□ -1.08
PABPC1-223ENST00000523636 ATF3P18847 181 aa8.29□□□□□ -1.08
PABPC1-223ENST00000523636 EMP3P54852 163 aa8.29□□□□□ -1.08
PABPC1-223ENST00000523636 VARS2Q5ST30 1063 aaKnown RBP8.29□□□□□ -1.08
PABPC1-223ENST00000523636 ATP1B4Q9UN42 357 aaPredicted RBP8.29□□□□□ -1.08
PABPC1-223ENST00000523636 SLIT2O94813 1529 aa8.29□□□□□ -1.08
PABPC1-223ENST00000523636 PBX2P40425 430 aa8.28□□□□□ -1.08
PABPC1-223ENST00000523636 METTL3Q86U44 580 aaKnown RBP8.28□□□□□ -1.08
PABPC1-223ENST00000523636 PARP9Q8IXQ6 854 aa8.28□□□□□ -1.08
PABPC1-223ENST00000523636 PXYLP1Q8TE99 480 aa8.28□□□□□ -1.08
PABPC1-223ENST00000523636 CAMKK2Q96RR4 588 aa8.28□□□□□ -1.08
PABPC1-223ENST00000523636 KCNK17Q96T54 332 aa8.28□□□□□ -1.08
PABPC1-223ENST00000523636 GPBP1L1Q9HC44 474 aaPredicted RBP8.28□□□□□ -1.08
PABPC1-223ENST00000523636 ZNF644Q9H582 1327 aaPredicted RBP8.28□□□□□ -1.08
PABPC1-223ENST00000523636 PLEKHH2Q8IVE3 1493 aa8.27□□□□□ -1.09
PABPC1-223ENST00000523636 POTEB3A0JP26 581 aa8.27□□□□□ -1.09
PABPC1-223ENST00000523636 TRIM6-TRIM34B2RNG4 842 aa8.27□□□□□ -1.09
PABPC1-223ENST00000523636 CLCN1P35523 988 aa8.27□□□□□ -1.09
PABPC1-223ENST00000523636 POTEBQ6S5H4 581 aa8.27□□□□□ -1.09
PABPC1-223ENST00000523636 RBM46Q8TBY0 533 aaKnown RBP8.27□□□□□ -1.09
PABPC1-223ENST00000523636 TMUB1Q9BVT8 246 aa8.27□□□□□ -1.09
PABPC1-223ENST00000523636 SLC4A5Q9BY07 1137 aa8.27□□□□□ -1.09
PABPC1-223ENST00000523636 CASZ1Q86V15 1759 aa8.27□□□□□ -1.09
PABPC1-223ENST00000523636 DCCP43146 1447 aa8.27□□□□□ -1.09
PABPC1-223ENST00000523636 MYO5BQ9ULV0 1848 aa8.26□□□□□ -1.09
PABPC1-223ENST00000523636 ADGRB3O60242 1522 aa8.26□□□□□ -1.09
PABPC1-223ENST00000523636 ARHGAP33O14559 1287 aa8.26□□□□□ -1.09
PABPC1-223ENST00000523636 HSPA6P17066 643 aa8.26□□□□□ -1.09
PABPC1-223ENST00000523636 TTLL12Q14166 644 aaPredicted RBP8.26□□□□□ -1.09
PABPC1-223ENST00000523636 KRT27Q7Z3Y8 459 aa8.26□□□□□ -1.09
PABPC1-223ENST00000523636 ZNF687Q8N1G0 1237 aa8.26□□□□□ -1.09
PABPC1-223ENST00000523636 TSKSQ9UJT2 592 aa8.26□□□□□ -1.09
PABPC1-223ENST00000523636 NBPF26B4DH59 902 aa8.25□□□□□ -1.09
PABPC1-223ENST00000523636 KCNQ2O43526 872 aa8.25□□□□□ -1.09
PABPC1-223ENST00000523636 PACS2Q86VP3 889 aa8.25□□□□□ -1.09
PABPC1-223ENST00000523636 PHOX2BQ99453 314 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms