RNA–Protein interactions for RNA: ENST00000522052.5

CTNNA1-233, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-233ENST00000522052 RASA1P20936 1047 aa8.52□□□□□ -1.05
CTNNA1-233ENST00000522052 COPS2P61201 443 aa8.52□□□□□ -1.05
CTNNA1-233ENST00000522052 MAP7D1Q3KQU3 841 aa8.52□□□□□ -1.05
CTNNA1-233ENST00000522052 ADAM32Q8TC27 787 aa8.52□□□□□ -1.05
CTNNA1-233ENST00000522052 SH3BP5LQ7L8J4 393 aa8.51□□□□□ -1.05
CTNNA1-233ENST00000522052 TXNDC2Q86VQ3 553 aa8.51□□□□□ -1.05
CTNNA1-233ENST00000522052 CCER1Q8TC90 406 aaPredicted RBP8.51□□□□□ -1.05
CTNNA1-233ENST00000522052 EML3Q32P44 896 aa8.5□□□□□ -1.05
CTNNA1-233ENST00000522052 PHLDB3Q6NSJ2 640 aa8.5□□□□□ -1.05
CTNNA1-233ENST00000522052 ZBTB33Q86T24 672 aa8.5□□□□□ -1.05
CTNNA1-233ENST00000522052 FAM200AQ8TCP9 573 aa8.5□□□□□ -1.05
CTNNA1-233ENST00000522052 CDCA7Q9BWT1 371 aaPredicted RBP8.5□□□□□ -1.05
CTNNA1-233ENST00000522052 UNC93B1Q9H1C4 597 aa8.5□□□□□ -1.05
CTNNA1-233ENST00000522052 ADH1BP00325 375 aa8.49□□□□□ -1.05
CTNNA1-233ENST00000522052 SSFA2P28290 1259 aa8.49□□□□□ -1.05
CTNNA1-233ENST00000522052 RBM25P49756 843 aaKnown RBP8.49□□□□□ -1.05
CTNNA1-233ENST00000522052 FAM69CQ0P6D2 419 aa8.49□□□□□ -1.05
CTNNA1-233ENST00000522052 TRAF7Q6Q0C0 670 aa8.49□□□□□ -1.05
CTNNA1-233ENST00000522052 ANKMY2Q8IV38 441 aa8.49□□□□□ -1.05
CTNNA1-233ENST00000522052 CLP1Q92989 425 aaKnown RBP8.49□□□□□ -1.05
CTNNA1-233ENST00000522052 ZPR1O75312 459 aa8.48□□□□□ -1.05
CTNNA1-233ENST00000522052 ARID4AP29374 1257 aaPredicted RBP8.48□□□□□ -1.05
CTNNA1-233ENST00000522052 PTCRAQ6ISU1 281 aaPredicted RBP8.48□□□□□ -1.05
CTNNA1-233ENST00000522052 THSD4Q6ZMP0 1018 aa8.48□□□□□ -1.05
CTNNA1-233ENST00000522052 TRIM50Q86XT4 487 aa8.48□□□□□ -1.05
CTNNA1-233ENST00000522052 SLAIN2Q9P270 581 aa8.48□□□□□ -1.05
CTNNA1-233ENST00000522052 AMOTL2Q9Y2J4 779 aa8.48□□□□□ -1.05
CTNNA1-233ENST00000522052 TLL1O43897 1013 aa8.47□□□□□ -1.05
CTNNA1-233ENST00000522052 NYAP1Q6ZVC0 841 aa8.47□□□□□ -1.05
CTNNA1-233ENST00000522052 DZIP3Q86Y13 1208 aaKnown RBP8.47□□□□□ -1.05
CTNNA1-233ENST00000522052 CDAN1Q8IWY9 1227 aa8.47□□□□□ -1.05
CTNNA1-233ENST00000522052 CCDC24Q8N4L8 307 aa8.47□□□□□ -1.05
CTNNA1-233ENST00000522052 OGFOD1Q8N543 542 aa8.47□□□□□ -1.05
CTNNA1-233ENST00000522052 ZNF428Q96B54 188 aa8.47□□□□□ -1.05
CTNNA1-233ENST00000522052 ATP1A2P50993 1020 aa8.46□□□□□ -1.06
CTNNA1-233ENST00000522052 SWI5Q1ZZU3 235 aa8.46□□□□□ -1.06
CTNNA1-233ENST00000522052 SH3RF1Q7Z6J0 888 aa8.46□□□□□ -1.06
CTNNA1-233ENST00000522052 NOD1Q9Y239 953 aa8.46□□□□□ -1.06
CTNNA1-233ENST00000522052 CLDN10P78369 228 aa8.45□□□□□ -1.06
CTNNA1-233ENST00000522052 DPYDQ12882 1025 aa8.45□□□□□ -1.06
CTNNA1-233ENST00000522052 TSGA10IPQ3SY00 556 aa8.45□□□□□ -1.06
CTNNA1-233ENST00000522052 MTRQ99707 1265 aa8.45□□□□□ -1.06
CTNNA1-233ENST00000522052 DNAAF2Q9NVR5 837 aaKnown RBP8.45□□□□□ -1.06
CTNNA1-233ENST00000522052 DOLKQ9UPQ8 538 aa8.45□□□□□ -1.06
CTNNA1-233ENST00000522052 LARGE2Q8N3Y3 721 aa8.44□□□□□ -1.06
CTNNA1-233ENST00000522052 CCDC85AQ96PX6 553 aaPredicted RBP8.44□□□□□ -1.06
CTNNA1-233ENST00000522052 CARD14Q9BXL6 1004 aa8.44□□□□□ -1.06
CTNNA1-233ENST00000522052 SLC6A16Q9GZN6 736 aa8.44□□□□□ -1.06
CTNNA1-233ENST00000522052 MYT1LQ9UL68 1186 aa8.44□□□□□ -1.06
CTNNA1-233ENST00000522052 MAGEB6P1A0A0J9YX57 407 aa8.43□□□□□ -1.06
CTNNA1-233ENST00000522052 GIGYF1O75420 1035 aaPredicted RBP8.43□□□□□ -1.06
CTNNA1-233ENST00000522052 ATP2B4P23634 1241 aa8.43□□□□□ -1.06
CTNNA1-233ENST00000522052 BPHLQ86WA6 291 aaPredicted RBP8.43□□□□□ -1.06
CTNNA1-233ENST00000522052 SIX5Q8N196 739 aa8.43□□□□□ -1.06
CTNNA1-233ENST00000522052 ZNF594Q96JF6 807 aaPredicted RBP8.43□□□□□ -1.06
CTNNA1-233ENST00000522052 DKK1O94907 266 aa8.42□□□□□ -1.06
CTNNA1-233ENST00000522052 RNF20Q5VTR2 975 aa8.42□□□□□ -1.06
CTNNA1-233ENST00000522052 BAP1Q92560 729 aa8.42□□□□□ -1.06
CTNNA1-233ENST00000522052 KCTD12Q96CX2 325 aaKnown RBP8.42□□□□□ -1.06
CTNNA1-233ENST00000522052 E9PSI1 815 aa8.41□□□□□ -1.06
CTNNA1-233ENST00000522052 ZBTB7BO15156 539 aaPredicted RBP8.41□□□□□ -1.06
CTNNA1-233ENST00000522052 ERFEQ4G0M1 354 aa8.41□□□□□ -1.06
CTNNA1-233ENST00000522052 OXLD1Q5BKU9 147 aa8.41□□□□□ -1.06
CTNNA1-233ENST00000522052 C1orf216Q8TAB5 229 aa8.41□□□□□ -1.06
CTNNA1-233ENST00000522052 IL21Q9HBE4 155 aa8.41□□□□□ -1.06
CTNNA1-233ENST00000522052 SOWAHDA6NJG2 315 aa8.4□□□□□ -1.06
CTNNA1-233ENST00000522052 GTF2IP78347 998 aa8.4□□□□□ -1.06
CTNNA1-233ENST00000522052 AGERQ15109 404 aa8.4□□□□□ -1.06
CTNNA1-233ENST00000522052 TJAP1Q5JTD0 557 aa8.4□□□□□ -1.06
CTNNA1-233ENST00000522052 ZNF511Q8NB15 262 aa8.4□□□□□ -1.06
CTNNA1-233ENST00000522052 FOXJ1Q92949 421 aa8.4□□□□□ -1.06
CTNNA1-233ENST00000522052 KIAA1024Q9UPX6 916 aa8.4□□□□□ -1.06
CTNNA1-233ENST00000522052 SEC13P55735 322 aa8.39□□□□□ -1.07
CTNNA1-233ENST00000522052 C4orf48Q5BLP8 95 aa8.39□□□□□ -1.07
CTNNA1-233ENST00000522052 ZNF516Q92618 1163 aa8.39□□□□□ -1.07
CTNNA1-233ENST00000522052 SIRT1Q96EB6 747 aa8.39□□□□□ -1.07
CTNNA1-233ENST00000522052 SLC10A4Q96EP9 437 aa8.39□□□□□ -1.07
CTNNA1-233ENST00000522052 RBM19Q9Y4C8 960 aaKnown RBP8.39□□□□□ -1.07
CTNNA1-233ENST00000522052 SERPINB4P48594 390 aa8.38□□□□□ -1.07
CTNNA1-233ENST00000522052 NBPF20Q3BBV1 942 aa8.38□□□□□ -1.07
CTNNA1-233ENST00000522052 LINC01559Q495D7 138 aa8.38□□□□□ -1.07
CTNNA1-233ENST00000522052 CCDC102BQ68D86 513 aa8.38□□□□□ -1.07
CTNNA1-233ENST00000522052 CCDC125Q86Z20 511 aa8.38□□□□□ -1.07
CTNNA1-233ENST00000522052 C1QTNF2Q9BXJ5 285 aa8.38□□□□□ -1.07
CTNNA1-233ENST00000522052 ESPNB1AK53 854 aa8.37□□□□□ -1.07
CTNNA1-233ENST00000522052 ERCC3P19447 782 aa8.37□□□□□ -1.07
CTNNA1-233ENST00000522052 USP4Q13107 963 aa8.37□□□□□ -1.07
CTNNA1-233ENST00000522052 KRTAP3-3Q9BYR6 98 aa8.37□□□□□ -1.07
CTNNA1-233ENST00000522052 KRTAP3-2Q9BYR7 98 aa8.37□□□□□ -1.07
CTNNA1-233ENST00000522052 PCDHGA11Q9Y5H2 935 aa8.37□□□□□ -1.07
CTNNA1-233ENST00000522052 S1PR4O95977 384 aa8.36□□□□□ -1.07
CTNNA1-233ENST00000522052 DNAJC14Q6Y2X3 702 aaPredicted RBP8.36□□□□□ -1.07
CTNNA1-233ENST00000522052 TRMT44Q8IYL2 757 aaKnown RBP8.36□□□□□ -1.07
CTNNA1-233ENST00000522052 SEPT12Q8IYM1 358 aa8.36□□□□□ -1.07
CTNNA1-233ENST00000522052 TPCN2Q8NHX9 752 aa8.36□□□□□ -1.07
CTNNA1-233ENST00000522052 CXXC1Q9P0U4 656 aaPredicted RBP8.36□□□□□ -1.07
CTNNA1-233ENST00000522052 CDV3Q9UKY7 258 aaKnown RBP8.36□□□□□ -1.07
CTNNA1-233ENST00000522052 FCF1Q9Y324 198 aaKnown RBP8.36□□□□□ -1.07
CTNNA1-233ENST00000522052 PRMT3O60678 531 aa8.35□□□□□ -1.07
CTNNA1-233ENST00000522052 OCLNQ16625 522 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms