RNA–Protein interactions for RNA: ENST00000521550.5

SPIDR-214, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,849 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-214ENST00000521550 GGNBP2Q9H3C7 697 aa18.22■□□□□ 0.51
SPIDR-214ENST00000521550 MYH16Q9H6N6 1097 aa18.21■□□□□ 0.51
SPIDR-214ENST00000521550 PRR36Q9H6K5 1346 aa18.21■□□□□ 0.51
SPIDR-214ENST00000521550 SBNO1A3KN83 1393 aa18.21■□□□□ 0.51
SPIDR-214ENST00000521550 MS4A1P11836 297 aa18.21■□□□□ 0.51
SPIDR-214ENST00000521550 ITSN1Q15811 1721 aa18.2■□□□□ 0.5
SPIDR-214ENST00000521550 CD163L1Q9NR16 1453 aa18.2■□□□□ 0.5
SPIDR-214ENST00000521550 LMOD2Q6P5Q4 547 aa18.2■□□□□ 0.5
SPIDR-214ENST00000521550 ERICH6Q7L0X2 663 aa18.19■□□□□ 0.5
SPIDR-214ENST00000521550 TRPC5Q9UL62 973 aaPredicted RBP18.19■□□□□ 0.5
SPIDR-214ENST00000521550 MAPK8IP3Q9UPT6 1336 aa18.19■□□□□ 0.5
SPIDR-214ENST00000521550 KIF20BQ96Q89 1820 aa18.19■□□□□ 0.5
SPIDR-214ENST00000521550 NEFMP07197 916 aa18.19■□□□□ 0.5
SPIDR-214ENST00000521550 HAP1P54257 671 aaPredicted RBP18.19■□□□□ 0.5
SPIDR-214ENST00000521550 ARHGEF10O15013 1369 aa18.18■□□□□ 0.5
SPIDR-214ENST00000521550 CANXP27824 592 aaKnown RBP18.18■□□□□ 0.5
SPIDR-214ENST00000521550 NEUROD2Q15784 382 aa18.18■□□□□ 0.5
SPIDR-214ENST00000521550 CENPQQ7L2Z9 268 aaPredicted RBP18.18■□□□□ 0.5
SPIDR-214ENST00000521550 U2SURPO15042 1029 aaKnown RBP18.17■□□□□ 0.5
SPIDR-214ENST00000521550 PDE3AQ14432 1141 aa18.17■□□□□ 0.5
SPIDR-214ENST00000521550 NGDNQ8NEJ9 315 aaKnown RBP18.17■□□□□ 0.5
SPIDR-214ENST00000521550 TRPM3Q9HCF6 1732 aaPredicted RBP18.17■□□□□ 0.5
SPIDR-214ENST00000521550 DIAPH1O60610 1272 aaKnown RBP18.16■□□□□ 0.5
SPIDR-214ENST00000521550 NUDT16Q96DE0 195 aaKnown RBP18.16■□□□□ 0.5
SPIDR-214ENST00000521550 ANP32EQ9BTT0 268 aa18.16■□□□□ 0.5
SPIDR-214ENST00000521550 SPINK5Q9NQ38 1064 aaPredicted RBP18.16■□□□□ 0.5
SPIDR-214ENST00000521550 BCL9LQ86UU0 1499 aa18.16■□□□□ 0.5
SPIDR-214ENST00000521550 RGS12O14924 1447 aa18.16■□□□□ 0.5
SPIDR-214ENST00000521550 PLEKHG5O94827 1062 aa18.16■□□□□ 0.5
SPIDR-214ENST00000521550 AAMPQ13685 434 aa18.16■□□□□ 0.5
SPIDR-214ENST00000521550 CABLES1Q8TDN4 633 aa18.16■□□□□ 0.5
SPIDR-214ENST00000521550 ATRNO75882 1429 aa18.15■□□□□ 0.5
SPIDR-214ENST00000521550 ABCA3Q99758 1704 aa18.15■□□□□ 0.5
SPIDR-214ENST00000521550 CT47B1P0C2W7 299 aaPredicted RBP18.15■□□□□ 0.5
SPIDR-214ENST00000521550 ANP32AP39687 249 aaKnown RBP18.15■□□□□ 0.5
SPIDR-214ENST00000521550 EDC4Q6P2E9 1401 aaKnown RBP18.15■□□□□ 0.5
SPIDR-214ENST00000521550 RRP7AQ9Y3A4 280 aaKnown RBP18.14■□□□□ 0.5
SPIDR-214ENST00000521550 ALS2Q96Q42 1657 aa18.14■□□□□ 0.49
SPIDR-214ENST00000521550 C20orf194Q5TEA3 1177 aa18.14■□□□□ 0.49
SPIDR-214ENST00000521550 ZNF692Q9BU19 519 aaPredicted RBP18.14■□□□□ 0.49
SPIDR-214ENST00000521550 CCDC61Q9Y6R9 512 aa18.14■□□□□ 0.49
SPIDR-214ENST00000521550 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.14■□□□□ 0.49
SPIDR-214ENST00000521550 PPIP5K1Q6PFW1 1433 aa18.13■□□□□ 0.49
SPIDR-214ENST00000521550 UPF1Q92900 1129 aaKnown RBP eCLIP18.12■□□□□ 0.49
SPIDR-214ENST00000521550 SLIT2O94813 1529 aa18.12■□□□□ 0.49
SPIDR-214ENST00000521550 COL3A1P02461 1466 aaPredicted RBP18.12■□□□□ 0.49
SPIDR-214ENST00000521550 TOPAZ1Q8N9V7 1692 aa18.11■□□□□ 0.49
SPIDR-214ENST00000521550 CPSF1Q10570 1443 aaKnown RBP18.11■□□□□ 0.49
SPIDR-214ENST00000521550 PAK3O75914 559 aaPredicted RBP18.11■□□□□ 0.49
SPIDR-214ENST00000521550 UNC5CLQ8IV45 518 aa18.11■□□□□ 0.49
SPIDR-214ENST00000521550 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.11■□□□□ 0.493e-6■■■□□ 16.7
SPIDR-214ENST00000521550 IL16Q14005 1332 aa18.1■□□□□ 0.49
SPIDR-214ENST00000521550 BCAR3O75815 825 aa18.1■□□□□ 0.49
SPIDR-214ENST00000521550 FCHSD2O94868 740 aa18.1■□□□□ 0.49
SPIDR-214ENST00000521550 GJD4Q96KN9 370 aaPredicted RBP18.09■□□□□ 0.49
SPIDR-214ENST00000521550 PLCH1Q4KWH8 1693 aa18.09■□□□□ 0.49
SPIDR-214ENST00000521550 NWD2Q9ULI1 1742 aa18.09■□□□□ 0.49
SPIDR-214ENST00000521550 TMPOP42166 694 aaKnown RBP18.09■□□□□ 0.49
SPIDR-214ENST00000521550 PLEKHF1Q96S99 279 aa18.09■□□□□ 0.49
SPIDR-214ENST00000521550 COG3Q96JB2 828 aa18.08■□□□□ 0.48
SPIDR-214ENST00000521550 KDM2BQ8NHM5 1336 aa18.08■□□□□ 0.48
SPIDR-214ENST00000521550 RARSP54136 660 aaKnown RBP18.07■□□□□ 0.48
SPIDR-214ENST00000521550 ACEP12821 1306 aa18.07■□□□□ 0.48
SPIDR-214ENST00000521550 AATKQ6ZMQ8 1374 aa18.07■□□□□ 0.48
SPIDR-214ENST00000521550 PLEKHG3A1L390 1219 aa18.06■□□□□ 0.48
SPIDR-214ENST00000521550 CALD1Q05682 793 aaKnown RBP18.06■□□□□ 0.48
SPIDR-214ENST00000521550 EP400Q96L91 3159 aa18.06■□□□□ 0.48
SPIDR-214ENST00000521550 CRYBG1Q9Y4K1 1723 aa18.05■□□□□ 0.48
SPIDR-214ENST00000521550 FAM83GA6ND36 823 aa18.05■□□□□ 0.48
SPIDR-214ENST00000521550 PPM1GO15355 546 aaPredicted RBP18.05■□□□□ 0.48
SPIDR-214ENST00000521550 PDE4AP27815 886 aa18.05■□□□□ 0.48
SPIDR-214ENST00000521550 FRAT1Q92837 279 aaPredicted RBP18.05■□□□□ 0.48
SPIDR-214ENST00000521550 POLKQ9UBT6 870 aa18.05■□□□□ 0.48
SPIDR-214ENST00000521550 GLI3P10071 1580 aa18.04■□□□□ 0.48
SPIDR-214ENST00000521550 RIPK4P57078 832 aa18.04■□□□□ 0.48
SPIDR-214ENST00000521550 MON2Q7Z3U7 1717 aa18.03■□□□□ 0.48
SPIDR-214ENST00000521550 COL14A1Q05707 1796 aaKnown RBP18.03■□□□□ 0.48
SPIDR-214ENST00000521550 VPS72Q15906 364 aa18.02■□□□□ 0.48
SPIDR-214ENST00000521550 CCDC9Q9Y3X0 531 aaKnown RBP18.02■□□□□ 0.48
SPIDR-214ENST00000521550 CLUAP1Q96AJ1 413 aa18.02■□□□□ 0.47
SPIDR-214ENST00000521550 BACH2Q9BYV9 841 aa18.02■□□□□ 0.47
SPIDR-214ENST00000521550 BTG4Q9NY30 223 aa18.01■□□□□ 0.47
SPIDR-214ENST00000521550 AKAP12Q02952 1782 aa18.01■□□□□ 0.47
SPIDR-214ENST00000521550 MSH5O43196 834 aa18■□□□□ 0.47
SPIDR-214ENST00000521550 IPO9Q96P70 1041 aaKnown RBP18■□□□□ 0.47
SPIDR-214ENST00000521550 PHRF1Q9P1Y6 1649 aaKnown RBP18■□□□□ 0.47
SPIDR-214ENST00000521550 NRAPQ86VF7 1730 aa18■□□□□ 0.47
SPIDR-214ENST00000521550 LMOD3Q0VAK6 560 aa18■□□□□ 0.47
SPIDR-214ENST00000521550 NUTM2GQ5VZR2 741 aa18■□□□□ 0.47
SPIDR-214ENST00000521550 ZKSCAN2Q63HK3 967 aa18■□□□□ 0.47
SPIDR-214ENST00000521550 NME9Q86XW9 330 aa18■□□□□ 0.47
SPIDR-214ENST00000521550 TRIM35Q9UPQ4 493 aa18■□□□□ 0.47
SPIDR-214ENST00000521550 MAP2P11137 1827 aaKnown RBP17.99■□□□□ 0.47
SPIDR-214ENST00000521550 ABTB2Q8N961 1025 aa17.99■□□□□ 0.47
SPIDR-214ENST00000521550 PRDM11Q9NQV5 511 aa17.99■□□□□ 0.47
SPIDR-214ENST00000521550 ZNF428Q96B54 188 aa17.98■□□□□ 0.47
SPIDR-214ENST00000521550 RSPH6AQ9H0K4 717 aa17.98■□□□□ 0.47
SPIDR-214ENST00000521550 COG6Q9Y2V7 657 aa17.98■□□□□ 0.47
SPIDR-214ENST00000521550 NOP58Q9Y2X3 529 aaKnown RBP17.98■□□□□ 0.47
SPIDR-214ENST00000521550 BRWD3Q6RI45 1802 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms