RNA–Protein interactions for RNA: ENST00000521550.5

SPIDR-214, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,849 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-214ENST00000521550 PTBP1P26599 531 aaKnown RBP eCLIP12.89□□□□□ -0.354e-17■■■■■ 34
SPIDR-214ENST00000521550 KHSRPQ92945 711 aaKnown RBP eCLIP14.57□□□□□ -0.087e-14■■■■□ 21.1
SPIDR-214ENST00000521550 GTF2F1P35269 517 aaKnown RBP eCLIP15.91■□□□□ 0.142e-13■■■■□ 26.1
SPIDR-214ENST00000521550 CSTF2P33240 577 aaKnown RBP eCLIP13.15□□□□□ -0.31e-11■■■■□ 21.8
SPIDR-214ENST00000521550 FMR1Q06787 632 aaKnown RBP eCLIP16.01■□□□□ 0.151e-11■■■■■ 41.2
SPIDR-214ENST00000521550 QKIQ96PU8 341 aaKnown RBP eCLIP14.53□□□□□ -0.087e-9■■■■■ 36.4
SPIDR-214ENST00000521550 HNRNPLP14866 589 aaKnown RBP eCLIP14.01□□□□□ -0.171e-8■■■■■ 28.9
SPIDR-214ENST00000521550 PRPF4O43172 522 aaKnown RBP eCLIP14.59□□□□□ -0.071e-8■■■■■ 32.2
SPIDR-214ENST00000521550 SF3B1O75533 1304 aaKnown RBP eCLIP14.53□□□□□ -0.082e-8■■■■■ 129.2
SPIDR-214ENST00000521550 SMNDC1O75940 238 aaKnown RBP eCLIP13.87□□□□□ -0.195e-8■□□□□ 11.3
SPIDR-214ENST00000521550 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.15■□□□□ 0.021e-7■■□□□ 11.5
SPIDR-214ENST00000521550 HLTFQ14527 1009 aaKnown RBP eCLIP15.08■□□□□ 02e-7■□□□□ 8.5
SPIDR-214ENST00000521550 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.02□□□□□ -0.162e-7■■■■■ 62.8
SPIDR-214ENST00000521550 ZNF622Q969S3 477 aaKnown RBP eCLIP16.55■□□□□ 0.242e-7■□□□□ 8.8
SPIDR-214ENST00000521550 EIF4G2P78344 907 aaKnown RBP eCLIP19.72■□□□□ 0.753e-7■■□□□ 12.5
SPIDR-214ENST00000521550 EIF3HO15372 352 aaKnown RBP eCLIP14.89□□□□□ -0.033e-7■□□□□ 10.4
SPIDR-214ENST00000521550 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.05■□□□□ -04e-7■■■■■ 38.1
SPIDR-214ENST00000521550 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.9□□□□□ -0.674e-7■■■■□ 26.6
SPIDR-214ENST00000521550 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.29□□□□□ -0.445e-7■■■■■ 41.3
SPIDR-214ENST00000521550 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.03■□□□□ -06e-7■■■■■ 229.9
SPIDR-214ENST00000521550 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.28■□□□□ 0.367e-7■■■■□ 21.8
SPIDR-214ENST00000521550 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.18■□□□□ 0.027e-7■■■■■ 70.8
SPIDR-214ENST00000521550 PPIGQ13427 754 aaKnown RBP eCLIP14.62□□□□□ -0.078e-7■■□□□ 13.7
SPIDR-214ENST00000521550 PCBP2Q15366 365 aaKnown RBP eCLIP13.87□□□□□ -0.199e-7■■■■■ 31
SPIDR-214ENST00000521550 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.44□□□□□ -0.261e-6■■■■□ 23.9
SPIDR-214ENST00000521550 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.65■□□□□ 0.261e-6■■■■□ 20.4
SPIDR-214ENST00000521550 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.8■□□□□ 0.122e-6■■■■□ 25.9
SPIDR-214ENST00000521550 LARP4Q71RC2 724 aaKnown RBP eCLIP13.93□□□□□ -0.182e-6■■■■■ 38.7
SPIDR-214ENST00000521550 SAFB2Q14151 953 aaKnown RBP eCLIP18.39■□□□□ 0.532e-6■■■■□ 22
SPIDR-214ENST00000521550 AGGF1Q8N302 714 aaeCLIP14.4□□□□□ -0.12e-6■■□□□ 12.5
SPIDR-214ENST00000521550 ILF3Q12906 894 aaKnown RBP eCLIP13.25□□□□□ -0.292e-6■■■■□ 21.1
SPIDR-214ENST00000521550 MATR3P43243 847 aaKnown RBP eCLIP15.2■□□□□ 0.022e-6■■■■■ 27.8
SPIDR-214ENST00000521550 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.11■□□□□ 0.493e-6■■■□□ 16.7
SPIDR-214ENST00000521550 HNRNPMP52272 730 aaKnown RBP eCLIP20.07■□□□□ 0.83e-6■■■■□ 25.9
SPIDR-214ENST00000521550 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.47■□□□□ 0.713e-6■■■□□ 15.2
SPIDR-214ENST00000521550 NIPBLQ6KC79 2804 aaeCLIP11.19□□□□□ -0.625e-6■■■■■ 32.2
SPIDR-214ENST00000521550 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.85□□□□□ -0.355e-6■□□□□ 9.7
SPIDR-214ENST00000521550 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.77□□□□□ -0.057e-6■■■■■ 27.7
SPIDR-214ENST00000521550 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.45□□□□□ -0.17e-6■■■■□ 20.5
Retrieved 39 of 39 RNA–protein pairs in 8.9 ms