RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 TNS3Q68CZ2 1445 aa7.52□□□□□ -1.21
SDCBP-207ENST00000520168 SPATA31A3Q5VYP0 1347 aa7.52□□□□□ -1.21
SDCBP-207ENST00000520168 THSD7AQ9UPZ6 1657 aa7.51□□□□□ -1.21
SDCBP-207ENST00000520168 FAM50AQ14320 339 aaKnown RBP7.51□□□□□ -1.21
SDCBP-207ENST00000520168 NUP188Q5SRE5 1749 aa7.51□□□□□ -1.21
SDCBP-207ENST00000520168 NAIPQ13075 1403 aa7.51□□□□□ -1.21
SDCBP-207ENST00000520168 ARHGEF10O15013 1369 aa7.5□□□□□ -1.21
SDCBP-207ENST00000520168 NINLQ9Y2I6 1382 aa7.5□□□□□ -1.21
SDCBP-207ENST00000520168 FOXO3O43524 673 aa7.5□□□□□ -1.21
SDCBP-207ENST00000520168 HAP1P54257 671 aaPredicted RBP7.5□□□□□ -1.21
SDCBP-207ENST00000520168 HS3ST6Q96QI5 342 aa7.5□□□□□ -1.21
SDCBP-207ENST00000520168 CCDC9Q9Y3X0 531 aaKnown RBP7.5□□□□□ -1.21
SDCBP-207ENST00000520168 RGPD3A6NKT7 1758 aaPredicted RBP7.5□□□□□ -1.21
SDCBP-207ENST00000520168 RGPD4Q7Z3J3 1758 aa7.5□□□□□ -1.21
SDCBP-207ENST00000520168 TECPR2O15040 1411 aa7.5□□□□□ -1.21
SDCBP-207ENST00000520168 RPGRIP1LQ68CZ1 1315 aa7.5□□□□□ -1.21
SDCBP-207ENST00000520168 FAM205CA6NFA0 338 aa7.49□□□□□ -1.21
SDCBP-207ENST00000520168 PSME1Q06323 249 aa7.49□□□□□ -1.21
SDCBP-207ENST00000520168 R3HDM1Q15032 1099 aaKnown RBP7.49□□□□□ -1.21
SDCBP-207ENST00000520168 SBNO1A3KN83 1393 aa7.48□□□□□ -1.21
SDCBP-207ENST00000520168 A0A0G2JS52 829 aa7.48□□□□□ -1.21
SDCBP-207ENST00000520168 MYT1Q01538 1121 aa7.48□□□□□ -1.21
SDCBP-207ENST00000520168 EN1Q05925 392 aaPredicted RBP7.48□□□□□ -1.21
SDCBP-207ENST00000520168 RRBP1Q9P2E9 1410 aaKnown RBP7.48□□□□□ -1.21
SDCBP-207ENST00000520168 CEP350Q5VT06 3117 aa7.47□□□□□ -1.21
SDCBP-207ENST00000520168 CRYBG1Q9Y4K1 1723 aa7.47□□□□□ -1.21
SDCBP-207ENST00000520168 POTEB3A0JP26 581 aa7.47□□□□□ -1.21
SDCBP-207ENST00000520168 XPCQ01831 940 aaPredicted RBP7.47□□□□□ -1.21
SDCBP-207ENST00000520168 AMER1Q5JTC6 1135 aaPredicted RBP7.47□□□□□ -1.21
SDCBP-207ENST00000520168 IFFO2Q5TF58 517 aa7.47□□□□□ -1.21
SDCBP-207ENST00000520168 POTEBQ6S5H4 581 aa7.47□□□□□ -1.21
SDCBP-207ENST00000520168 NRXN1Q9ULB1 1477 aa7.47□□□□□ -1.21
SDCBP-207ENST00000520168 ALS2Q96Q42 1657 aa7.47□□□□□ -1.21
SDCBP-207ENST00000520168 TRPM3Q9HCF6 1732 aaPredicted RBP7.47□□□□□ -1.21
SDCBP-207ENST00000520168 HOXB3P14651 431 aaPredicted RBP7.46□□□□□ -1.22
SDCBP-207ENST00000520168 NBPF8Q3BBV2 869 aa7.46□□□□□ -1.22
SDCBP-207ENST00000520168 NBPF14Q5TI25 921 aa7.46□□□□□ -1.22
SDCBP-207ENST00000520168 CAMTA1Q9Y6Y1 1673 aa7.45□□□□□ -1.22
SDCBP-207ENST00000520168 FAM98CQ17RN3 349 aaKnown RBP7.45□□□□□ -1.22
SDCBP-207ENST00000520168 DOK7Q18PE1 504 aa7.45□□□□□ -1.22
SDCBP-207ENST00000520168 FAM196AQ6ZSG2 479 aa7.45□□□□□ -1.22
SDCBP-207ENST00000520168 KRT28Q7Z3Y7 464 aa7.45□□□□□ -1.22
SDCBP-207ENST00000520168 EFCAB3Q8N7B9 438 aa7.45□□□□□ -1.22
SDCBP-207ENST00000520168 CAMKK2Q96RR4 588 aa7.45□□□□□ -1.22
SDCBP-207ENST00000520168 KRTAP3-3Q9BYR6 98 aa7.45□□□□□ -1.22
SDCBP-207ENST00000520168 KRTAP3-2Q9BYR7 98 aa7.45□□□□□ -1.22
SDCBP-207ENST00000520168 SPON1Q9HCB6 807 aa7.45□□□□□ -1.22
SDCBP-207ENST00000520168 PPP1R1BQ9UD71 204 aaPredicted RBP7.45□□□□□ -1.22
SDCBP-207ENST00000520168 HOXB1P14653 301 aaPredicted RBP7.44□□□□□ -1.22
SDCBP-207ENST00000520168 EZH2Q15910 746 aaKnown RBP7.44□□□□□ -1.22
SDCBP-207ENST00000520168 ZNF710Q8N1W2 664 aa7.44□□□□□ -1.22
SDCBP-207ENST00000520168 ABCC11Q96J66 1382 aa7.44□□□□□ -1.22
SDCBP-207ENST00000520168 GOLGB1Q14789 3259 aaKnown RBP7.44□□□□□ -1.22
SDCBP-207ENST00000520168 CASZ1Q86V15 1759 aa7.43□□□□□ -1.22
SDCBP-207ENST00000520168 BTG4Q9NY30 223 aa7.43□□□□□ -1.22
SDCBP-207ENST00000520168 PHF8Q9UPP1 1060 aa7.43□□□□□ -1.22
SDCBP-207ENST00000520168 SPATA31A5Q5VU36 1347 aa7.43□□□□□ -1.22
SDCBP-207ENST00000520168 SPATA31A7Q8IWB4 1347 aa7.43□□□□□ -1.22
SDCBP-207ENST00000520168 ITSN1Q15811 1721 aa7.43□□□□□ -1.22
SDCBP-207ENST00000520168 PARP4Q9UKK3 1724 aaKnown RBP7.42□□□□□ -1.22
SDCBP-207ENST00000520168 FAM83GA6ND36 823 aa7.42□□□□□ -1.22
SDCBP-207ENST00000520168 C11orf95C9JLR9 678 aaPredicted RBP7.42□□□□□ -1.22
SDCBP-207ENST00000520168 KCNQ2O43526 872 aa7.42□□□□□ -1.22
SDCBP-207ENST00000520168 SIRT1Q96EB6 747 aa7.42□□□□□ -1.22
SDCBP-207ENST00000520168 SBF2Q86WG5 1849 aa7.42□□□□□ -1.22
SDCBP-207ENST00000520168 ANKARQ7Z5J8 1434 aa7.42□□□□□ -1.22
SDCBP-207ENST00000520168 NRKQ7Z2Y5 1582 aa7.42□□□□□ -1.22
SDCBP-207ENST00000520168 PHRF1Q9P1Y6 1649 aaKnown RBP7.41□□□□□ -1.22
SDCBP-207ENST00000520168 SENP3-EIF4A1A0A087X0R7 540 aa7.41□□□□□ -1.22
SDCBP-207ENST00000520168 NUTM2FA1L443 756 aa7.41□□□□□ -1.22
SDCBP-207ENST00000520168 RIMBP2O15034 1052 aa7.41□□□□□ -1.22
SDCBP-207ENST00000520168 SOX12O15370 315 aa7.41□□□□□ -1.22
SDCBP-207ENST00000520168 APBA3O96018 575 aa7.41□□□□□ -1.22
SDCBP-207ENST00000520168 LMOD2Q6P5Q4 547 aa7.41□□□□□ -1.22
SDCBP-207ENST00000520168 ZNF784Q8NCA9 323 aaPredicted RBP7.41□□□□□ -1.22
SDCBP-207ENST00000520168 CABLES1Q8TDN4 633 aa7.41□□□□□ -1.22
SDCBP-207ENST00000520168 ANKRD30BQ9BXX2 1392 aa7.41□□□□□ -1.22
SDCBP-207ENST00000520168 YTHDC2Q9H6S0 1430 aaKnown RBP7.41□□□□□ -1.22
SDCBP-207ENST00000520168 TRIM37O94972 964 aa7.4□□□□□ -1.22
SDCBP-207ENST00000520168 EIF3AQ14152 1382 aaKnown RBP7.4□□□□□ -1.22
SDCBP-207ENST00000520168 PIK3C2GO75747 1445 aa7.4□□□□□ -1.22
SDCBP-207ENST00000520168 MYOM1P52179 1685 aa7.4□□□□□ -1.23
SDCBP-207ENST00000520168 GPRASP1Q5JY77 1395 aa7.39□□□□□ -1.23
SDCBP-207ENST00000520168 ERBB3P21860 1342 aa7.39□□□□□ -1.23
SDCBP-207ENST00000520168 SPATA31A1Q5TZJ5 1347 aa7.39□□□□□ -1.23
SDCBP-207ENST00000520168 RIOK3O14730 519 aaKnown RBP7.39□□□□□ -1.23
SDCBP-207ENST00000520168 C1QTNF8P60827 252 aa7.39□□□□□ -1.23
SDCBP-207ENST00000520168 WAPLQ7Z5K2 1190 aa7.39□□□□□ -1.23
SDCBP-207ENST00000520168 AKAP12Q02952 1782 aa7.38□□□□□ -1.23
SDCBP-207ENST00000520168 DLC1Q96QB1 1528 aa7.38□□□□□ -1.23
SDCBP-207ENST00000520168 PLEKHH1Q9ULM0 1364 aa7.38□□□□□ -1.23
SDCBP-207ENST00000520168 FAM182BQ5T319 152 aa7.38□□□□□ -1.23
SDCBP-207ENST00000520168 MICALL2Q8IY33 904 aa7.38□□□□□ -1.23
SDCBP-207ENST00000520168 ZSWIM6Q9HCJ5 1215 aa7.38□□□□□ -1.23
SDCBP-207ENST00000520168 ATP7BP35670 1465 aa7.37□□□□□ -1.23
SDCBP-207ENST00000520168 WNK3Q9BYP7 1800 aa7.37□□□□□ -1.23
SDCBP-207ENST00000520168 LOC105371045A0A1W2PR82 267 aa7.37□□□□□ -1.23
SDCBP-207ENST00000520168 PDE3BQ13370 1112 aa7.37□□□□□ -1.23
SDCBP-207ENST00000520168 BARGINQ6ZT62 677 aa7.37□□□□□ -1.23
SDCBP-207ENST00000520168 PRDM11Q9NQV5 511 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms