RNA–Protein interactions for RNA: ENST00000519506.1

LINC01609-201, Transcript of long intergenic non-protein coding RNA 1609, humanhuman

TSL 3 BASIC

Gene LINC01609, Length 424 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01609-201ENST00000519506 ERFEQ4G0M1 354 aa8.92□□□□□ -0.98
LINC01609-201ENST00000519506 RNF20Q5VTR2 975 aa8.92□□□□□ -0.98
LINC01609-201ENST00000519506 DEPDC4Q8N2C3 294 aa8.92□□□□□ -0.98
LINC01609-201ENST00000519506 PHTF2Q8N3S3 785 aa8.92□□□□□ -0.98
LINC01609-201ENST00000519506 PLPP7Q8NBV4 271 aa8.92□□□□□ -0.98
LINC01609-201ENST00000519506 NBPF20Q3BBV1 942 aa8.91□□□□□ -0.98
LINC01609-201ENST00000519506 KANK4Q5T7N3 995 aaPredicted RBP8.91□□□□□ -0.98
LINC01609-201ENST00000519506 MKRN1Q9UHC7 482 aaKnown RBP8.91□□□□□ -0.98
LINC01609-201ENST00000519506 CDV3Q9UKY7 258 aaKnown RBP8.91□□□□□ -0.98
LINC01609-201ENST00000519506 SH3BP2P78314 561 aa8.9□□□□□ -0.98
LINC01609-201ENST00000519506 NCOA4Q13772 614 aa8.9□□□□□ -0.98
LINC01609-201ENST00000519506 EML3Q32P44 896 aa8.9□□□□□ -0.98
LINC01609-201ENST00000519506 LARP1Q6PKG0 1096 aaKnown RBP8.9□□□□□ -0.98
LINC01609-201ENST00000519506 ATP5J2-PTCD1G3V325 749 aa8.89□□□□□ -0.99
LINC01609-201ENST00000519506 GIGYF1O75420 1035 aaPredicted RBP8.89□□□□□ -0.99
LINC01609-201ENST00000519506 TRIM32Q13049 653 aa8.89□□□□□ -0.99
LINC01609-201ENST00000519506 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.89□□□□□ -0.99
LINC01609-201ENST00000519506 DOLKQ9UPQ8 538 aa8.89□□□□□ -0.99
LINC01609-201ENST00000519506 CD2BP2O95400 341 aaKnown RBP8.88□□□□□ -0.99
LINC01609-201ENST00000519506 RASA1P20936 1047 aa8.88□□□□□ -0.99
LINC01609-201ENST00000519506 WNT7BP56706 349 aa8.88□□□□□ -0.99
LINC01609-201ENST00000519506 ELOAQ14241 798 aaKnown RBP8.88□□□□□ -0.99
LINC01609-201ENST00000519506 C4orf48Q5BLP8 95 aa8.88□□□□□ -0.99
LINC01609-201ENST00000519506 PPP1R18Q6NYC8 613 aa8.88□□□□□ -0.99
LINC01609-201ENST00000519506 CCDC125Q86Z20 511 aa8.88□□□□□ -0.99
LINC01609-201ENST00000519506 PATL2C9JE40 543 aaKnown RBP8.87□□□□□ -0.99
LINC01609-201ENST00000519506 VARSP26640 1264 aaKnown RBP8.87□□□□□ -0.99
LINC01609-201ENST00000519506 RPIAP49247 311 aa8.87□□□□□ -0.99
LINC01609-201ENST00000519506 TRIM50Q86XT4 487 aa8.87□□□□□ -0.99
LINC01609-201ENST00000519506 TRMT44Q8IYL2 757 aaKnown RBP8.87□□□□□ -0.99
LINC01609-201ENST00000519506 C1QTNF2Q9BXJ5 285 aa8.87□□□□□ -0.99
LINC01609-201ENST00000519506 CHIC2Q9UKJ5 165 aa8.87□□□□□ -0.99
LINC01609-201ENST00000519506 NOD1Q9Y239 953 aa8.87□□□□□ -0.99
LINC01609-201ENST00000519506 FAM196BA6NMK8 535 aa8.86□□□□□ -0.99
LINC01609-201ENST00000519506 NOVA2Q9UNW9 492 aaKnown RBP8.86□□□□□ -0.99
LINC01609-201ENST00000519506 BRD1O95696 1058 aa8.85□□□□□ -0.99
LINC01609-201ENST00000519506 ATP1A2P50993 1020 aa8.85□□□□□ -0.99
LINC01609-201ENST00000519506 TSGA10IPQ3SY00 556 aa8.85□□□□□ -0.99
LINC01609-201ENST00000519506 OXLD1Q5BKU9 147 aa8.85□□□□□ -0.99
LINC01609-201ENST00000519506 PLA2G2CQ5R387 149 aa8.85□□□□□ -0.99
LINC01609-201ENST00000519506 TRAF7Q6Q0C0 670 aa8.85□□□□□ -0.99
LINC01609-201ENST00000519506 SEPT12Q8IYM1 358 aa8.85□□□□□ -0.99
LINC01609-201ENST00000519506 SIRT1Q96EB6 747 aa8.85□□□□□ -0.99
LINC01609-201ENST00000519506 USP17L15C9J2P7 530 aa8.84□□□□□ -0.99
LINC01609-201ENST00000519506 USP17L10C9JJH3 530 aa8.84□□□□□ -0.99
LINC01609-201ENST00000519506 USP17L13C9JLJ4 530 aa8.84□□□□□ -0.99
LINC01609-201ENST00000519506 USP17L12C9JPN9 530 aa8.84□□□□□ -0.99
LINC01609-201ENST00000519506 USP17L11C9JVI0 530 aa8.84□□□□□ -0.99
LINC01609-201ENST00000519506 USP17L21D6R901 530 aa8.84□□□□□ -0.99
LINC01609-201ENST00000519506 USP17L18D6R9N7 530 aa8.84□□□□□ -0.99
LINC01609-201ENST00000519506 USP17L22D6RA61 530 aa8.84□□□□□ -0.99
LINC01609-201ENST00000519506 USP17L17D6RBQ6 530 aa8.84□□□□□ -0.99
LINC01609-201ENST00000519506 USP17L19D6RCP7 530 aa8.84□□□□□ -0.99
LINC01609-201ENST00000519506 USP17L20D6RJB6 530 aa8.84□□□□□ -0.99
LINC01609-201ENST00000519506 USP17L24Q0WX57 530 aa8.84□□□□□ -0.99
LINC01609-201ENST00000519506 EHBP1Q8NDI1 1231 aa8.84□□□□□ -0.99
LINC01609-201ENST00000519506 CCDC85AQ96PX6 553 aaPredicted RBP8.84□□□□□ -0.99
LINC01609-201ENST00000519506 ESPNB1AK53 854 aa8.83□□□□□ -1
LINC01609-201ENST00000519506 USP4Q13107 963 aa8.83□□□□□ -1
LINC01609-201ENST00000519506 CRTC2Q53ET0 693 aaPredicted RBP8.83□□□□□ -1
LINC01609-201ENST00000519506 B4GALNT3Q6L9W6 998 aa8.83□□□□□ -1
LINC01609-201ENST00000519506 VASH1Q7L8A9 365 aaPredicted RBP8.83□□□□□ -1
LINC01609-201ENST00000519506 OGFOD1Q8N543 542 aa8.83□□□□□ -1
LINC01609-201ENST00000519506 FAM200AQ8TCP9 573 aa8.83□□□□□ -1
LINC01609-201ENST00000519506 TRIM52Q96A61 297 aa8.83□□□□□ -1
LINC01609-201ENST00000519506 KCTD15Q96SI1 283 aaPredicted RBP8.83□□□□□ -1
LINC01609-201ENST00000519506 RBM19Q9Y4C8 960 aaKnown RBP8.83□□□□□ -1
LINC01609-201ENST00000519506 PCDHB11Q9Y5F2 797 aa8.83□□□□□ -1
LINC01609-201ENST00000519506 CARNS1A5YM72 827 aa8.82□□□□□ -1
LINC01609-201ENST00000519506 TMEM88BA6NKF7 163 aa8.82□□□□□ -1
LINC01609-201ENST00000519506 SKOR1P84550 965 aa8.82□□□□□ -1
LINC01609-201ENST00000519506 KCNA1Q09470 495 aa8.82□□□□□ -1
LINC01609-201ENST00000519506 PTK7Q13308 1070 aa8.82□□□□□ -1
LINC01609-201ENST00000519506 CDCA7Q9BWT1 371 aaPredicted RBP8.82□□□□□ -1
LINC01609-201ENST00000519506 ESF1Q9H501 851 aaKnown RBP8.82□□□□□ -1
LINC01609-201ENST00000519506 DNAAF2Q9NVR5 837 aaKnown RBP8.82□□□□□ -1
LINC01609-201ENST00000519506 RAB15P59190 212 aa8.81□□□□□ -1
LINC01609-201ENST00000519506 ARID5BQ14865 1188 aa8.81□□□□□ -1
LINC01609-201ENST00000519506 RC3H1Q5TC82 1133 aaKnown RBP8.81□□□□□ -1
LINC01609-201ENST00000519506 ANKMY2Q8IV38 441 aa8.81□□□□□ -1
LINC01609-201ENST00000519506 STK32AQ8WU08 396 aa8.81□□□□□ -1
LINC01609-201ENST00000519506 ZMIZ1Q9ULJ6 1067 aa8.81□□□□□ -1
LINC01609-201ENST00000519506 MAP4K5Q9Y4K4 846 aa8.81□□□□□ -1
LINC01609-201ENST00000519506 MYCP01106 439 aaPredicted RBP8.8□□□□□ -1
LINC01609-201ENST00000519506 GTF2IP78347 998 aa8.8□□□□□ -1
LINC01609-201ENST00000519506 TMEM164Q5U3C3 297 aa8.8□□□□□ -1
LINC01609-201ENST00000519506 LARGE2Q8N3Y3 721 aa8.8□□□□□ -1
LINC01609-201ENST00000519506 ZNF594Q96JF6 807 aaPredicted RBP8.8□□□□□ -1
LINC01609-201ENST00000519506 PSME1Q06323 249 aa8.79□□□□□ -1
LINC01609-201ENST00000519506 CLDN10P78369 228 aa8.78□□□□□ -1
LINC01609-201ENST00000519506 DPYDQ12882 1025 aa8.78□□□□□ -1
LINC01609-201ENST00000519506 LIAT1Q6ZQX7 453 aa8.78□□□□□ -1
LINC01609-201ENST00000519506 CCDC9Q9Y3X0 531 aaKnown RBP8.78□□□□□ -1
LINC01609-201ENST00000519506 SLC19A1P41440 591 aa8.77□□□□□ -1.01
LINC01609-201ENST00000519506 DHX9Q08211 1270 aaKnown RBP8.77□□□□□ -1.01
LINC01609-201ENST00000519506 ERVH48-1M5A8F1 160 aa8.76□□□□□ -1.01
LINC01609-201ENST00000519506 INTS6LQ5JSJ4 861 aaKnown RBP8.76□□□□□ -1.01
LINC01609-201ENST00000519506 IFFO2Q5TF58 517 aa8.76□□□□□ -1.01
LINC01609-201ENST00000519506 CCDC102BQ68D86 513 aa8.76□□□□□ -1.01
LINC01609-201ENST00000519506 CDK15Q96Q40 435 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms