RNA–Protein interactions for RNA: ENST00000517713.5

COL13A1-210, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-210ENST00000517713 PANK1Q8TE04 598 aa34.23■■■■□ 3.07
COL13A1-210ENST00000517713 KDM2BQ8NHM5 1336 aa34.23■■■■□ 3.07
COL13A1-210ENST00000517713 SBNO1A3KN83 1393 aa34.22■■■■□ 3.07
COL13A1-210ENST00000517713 SULT6B1Q6IMI4 303 aa34.21■■■■□ 3.07
COL13A1-210ENST00000517713 LMOD3Q0VAK6 560 aa34.21■■■■□ 3.07
COL13A1-210ENST00000517713 CENPQQ7L2Z9 268 aaPredicted RBP34.21■■■■□ 3.07
COL13A1-210ENST00000517713 RGPD1P0DJD0 1748 aa34.2■■■■□ 3.07
COL13A1-210ENST00000517713 USP54Q70EL1 1684 aa34.2■■■■□ 3.06
COL13A1-210ENST00000517713 FLT4P35916 1363 aa34.2■■■■□ 3.06
COL13A1-210ENST00000517713 COG6Q9Y2V7 657 aa34.2■■■■□ 3.06
COL13A1-210ENST00000517713 NWD1Q149M9 1564 aa34.19■■■■□ 3.06
COL13A1-210ENST00000517713 AEBP1Q8IUX7 1158 aa34.19■■■■□ 3.06
COL13A1-210ENST00000517713 DLG5Q8TDM6 1919 aa34.19■■■■□ 3.06
COL13A1-210ENST00000517713 TCERG1O14776 1098 aaKnown RBP34.18■■■■□ 3.06
COL13A1-210ENST00000517713 ABTB2Q8N961 1025 aa34.18■■■■□ 3.06
COL13A1-210ENST00000517713 MARF1Q9Y4F3 1742 aaKnown RBP34.17■■■■□ 3.06
COL13A1-210ENST00000517713 PAK3O75914 559 aaPredicted RBP34.17■■■■□ 3.06
COL13A1-210ENST00000517713 C14orf37Q86TY3 774 aa34.16■■■■□ 3.06
COL13A1-210ENST00000517713 THUMPD2Q9BTF0 503 aaKnown RBP34.16■■■■□ 3.06
COL13A1-210ENST00000517713 LAS1LQ9Y4W2 734 aaKnown RBP34.16■■■■□ 3.06
COL13A1-210ENST00000517713 AMPHP49418 695 aa34.16■■■■□ 3.06
COL13A1-210ENST00000517713 NUTM2GQ5VZR2 741 aa34.15■■■■□ 3.06
COL13A1-210ENST00000517713 SMC4Q9NTJ3 1288 aa34.15■■■■□ 3.06
COL13A1-210ENST00000517713 IFT57Q9NWB7 429 aa34.14■■■■□ 3.06
COL13A1-210ENST00000517713 GNAI1P63096 354 aa34.14■■■■□ 3.06
COL13A1-210ENST00000517713 ESCO1Q5FWF5 840 aa34.13■■■■□ 3.05
COL13A1-210ENST00000517713 ZKSCAN2Q63HK3 967 aa34.13■■■■□ 3.05
COL13A1-210ENST00000517713 SSH1Q8WYL5 1049 aa34.13■■■■□ 3.05
COL13A1-210ENST00000517713 ARHGEF10O15013 1369 aa34.13■■■■□ 3.05
COL13A1-210ENST00000517713 TNNQ9UQP3 1299 aa34.13■■■■□ 3.05
COL13A1-210ENST00000517713 RLBP1P12271 317 aa34.12■■■■□ 3.05
COL13A1-210ENST00000517713 CLUAP1Q96AJ1 413 aa34.11■■■■□ 3.05
COL13A1-210ENST00000517713 ZNF853P0CG23 659 aa34.11■■■■□ 3.05
COL13A1-210ENST00000517713 AAMPQ13685 434 aa34.1■■■■□ 3.05
COL13A1-210ENST00000517713 KIF24Q5T7B8 1368 aa34.1■■■■□ 3.05
COL13A1-210ENST00000517713 MS4A1P11836 297 aa34.08■■■■□ 3.05
COL13A1-210ENST00000517713 PROSER2Q86WR7 435 aaPredicted RBP34.08■■■■□ 3.05
COL13A1-210ENST00000517713 PSME1Q06323 249 aa34.08■■■■□ 3.05
COL13A1-210ENST00000517713 FAM83GA6ND36 823 aa34.07■■■■□ 3.04
COL13A1-210ENST00000517713 ALDH1L2Q3SY69 923 aa34.06■■■■□ 3.04
COL13A1-210ENST00000517713 CFAP44Q96MT7 982 aa34.06■■■■□ 3.04
COL13A1-210ENST00000517713 ZNF428Q96B54 188 aa34.06■■■■□ 3.04
COL13A1-210ENST00000517713 DZIP1LQ8IYY4 767 aaKnown RBP34.05■■■■□ 3.04
COL13A1-210ENST00000517713 MBIPQ9NS73 344 aa34.05■■■■□ 3.04
COL13A1-210ENST00000517713 HOXC9P31274 260 aa34.04■■■■□ 3.04
COL13A1-210ENST00000517713 FTSJ3Q8IY81 847 aaKnown RBP34.04■■■■□ 3.04
COL13A1-210ENST00000517713 DCTN1Q14203 1278 aa34.03■■■■□ 3.04
COL13A1-210ENST00000517713 IGSF1Q8N6C5 1336 aa34.03■■■■□ 3.04
COL13A1-210ENST00000517713 EYA1Q99502 592 aa34.03■■■■□ 3.04
COL13A1-210ENST00000517713 KDRP35968 1356 aa34.02■■■■□ 3.04
COL13A1-210ENST00000517713 MVPQ14764 893 aaKnown RBP34.02■■■■□ 3.04
COL13A1-210ENST00000517713 NOB1Q9ULX3 412 aaKnown RBP34.02■■■■□ 3.04
COL13A1-210ENST00000517713 KIF16BQ96L93 1317 aa34.01■■■■□ 3.03
COL13A1-210ENST00000517713 TRIM27P14373 513 aa34.01■■■■□ 3.03
COL13A1-210ENST00000517713 ATF7IPQ6VMQ6 1270 aa34.01■■■■□ 3.03
COL13A1-210ENST00000517713 SKAP1Q86WV1 359 aa34.01■■■■□ 3.03
COL13A1-210ENST00000517713 ORAI2Q96SN7 254 aa34■■■■□ 3.03
COL13A1-210ENST00000517713 VAMP4O75379 141 aa33.99■■■■□ 3.03
COL13A1-210ENST00000517713 IGHDP01880 384 aa33.99■■■■□ 3.03
COL13A1-210ENST00000517713 IPO8O15397 1037 aaKnown RBP33.98■■■■□ 3.03
COL13A1-210ENST00000517713 BRPF1P55201 1214 aaPredicted RBP33.97■■■■□ 3.03
COL13A1-210ENST00000517713 RTL1A6NKG5 1358 aa33.97■■■■□ 3.03
COL13A1-210ENST00000517713 TSPYL6Q8N831 410 aa33.96■■■■□ 3.03
COL13A1-210ENST00000517713 C19orf44Q9H6X5 657 aa33.96■■■■□ 3.03
COL13A1-210ENST00000517713 LTN1O94822 1766 aa33.94■■■■□ 3.02
COL13A1-210ENST00000517713 NFAT5O94916 1531 aa33.94■■■■□ 3.02
COL13A1-210ENST00000517713 FOXO3O43524 673 aa33.94■■■■□ 3.02
COL13A1-210ENST00000517713 MCM10Q7L590 875 aa33.93■■■■□ 3.02
COL13A1-210ENST00000517713 PDE4AP27815 886 aa33.92■■■■□ 3.02
COL13A1-210ENST00000517713 MTHFSDQ2M296 383 aaKnown RBP33.92■■■■□ 3.02
COL13A1-210ENST00000517713 TWISTNBQ3B726 338 aaPredicted RBP33.92■■■■□ 3.02
COL13A1-210ENST00000517713 KCNH5Q8NCM2 988 aa33.92■■■■□ 3.02
COL13A1-210ENST00000517713 PCDHB15Q9Y5E8 787 aa33.91■■■■□ 3.02
COL13A1-210ENST00000517713 C8orf58Q8NAV2 365 aa33.91■■■■□ 3.02
COL13A1-210ENST00000517713 C1orf167Q5SNV9 1468 aa33.9■■■■□ 3.02
COL13A1-210ENST00000517713 ELL2O00472 640 aaPredicted RBP33.9■■■■□ 3.02
COL13A1-210ENST00000517713 MRPL50Q8N5N7 158 aaKnown RBP33.89■■■■□ 3.02
COL13A1-210ENST00000517713 IP6K1Q92551 441 aa33.89■■■■□ 3.02
COL13A1-210ENST00000517713 CHL1O00533 1208 aa33.89■■■■□ 3.02
COL13A1-210ENST00000517713 GAS2L2Q8NHY3 880 aa33.89■■■■□ 3.02
COL13A1-210ENST00000517713 BACH2Q9BYV9 841 aa33.89■■■■□ 3.02
COL13A1-210ENST00000517713 DDX19BQ9UMR2 479 aa33.89■■■■□ 3.02
COL13A1-210ENST00000517713 LTV1Q96GA3 475 aaPredicted RBP33.88■■■■□ 3.01
COL13A1-210ENST00000517713 KIF1AQ12756 1690 aa33.88■■■■□ 3.01
COL13A1-210ENST00000517713 XPCQ01831 940 aaPredicted RBP33.87■■■■□ 3.01
COL13A1-210ENST00000517713 ITPRIPQ8IWB1 547 aa33.87■■■■□ 3.01
COL13A1-210ENST00000517713 CRB1P82279 1406 aa33.86■■■■□ 3.01
COL13A1-210ENST00000517713 STRCP1A6NGW2 1772 aa33.86■■■■□ 3.01
COL13A1-210ENST00000517713 TMEM57Q8N5G2 664 aa33.86■■■■□ 3.01
COL13A1-210ENST00000517713 RTF1Q92541 710 aaKnown RBP33.86■■■■□ 3.01
COL13A1-210ENST00000517713 TMEM94Q12767 1356 aa33.85■■■■□ 3.01
COL13A1-210ENST00000517713 ARHGAP45Q92619 1136 aa33.84■■■■□ 3.01
COL13A1-210ENST00000517713 KRT28Q7Z3Y7 464 aa33.84■■■■□ 3.01
COL13A1-210ENST00000517713 TRPM3Q9HCF6 1732 aaPredicted RBP33.83■■■■□ 3.01
COL13A1-210ENST00000517713 HSPA2P54652 639 aa33.83■■■■□ 3.01
COL13A1-210ENST00000517713 RWDD1Q9H446 243 aaPredicted RBP33.83■■■■□ 3.01
COL13A1-210ENST00000517713 ATF3P18847 181 aa33.82■■■■□ 3.01
COL13A1-210ENST00000517713 NCOA3Q9Y6Q9 1424 aa33.82■■■■□ 3.01
COL13A1-210ENST00000517713 PHRF1Q9P1Y6 1649 aaKnown RBP33.82■■■■□ 3
COL13A1-210ENST00000517713 SLIT3O75094 1523 aa33.81■■■■□ 3
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms