RNA–Protein interactions for RNA: ENST00000517275.3

RNU6-840P-201, Transcript of RNA, U6 small nuclear 840, pseudogene, humanhuman

BASIC

Gene RNU6-840P, Length 65 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-840P-201ENST00000517275 CARNS1A5YM72 827 aa5.74□□□□□ -1.49
RNU6-840P-201ENST00000517275 SSFA2P28290 1259 aa5.74□□□□□ -1.49
RNU6-840P-201ENST00000517275 SIX5Q8N196 739 aa5.74□□□□□ -1.49
RNU6-840P-201ENST00000517275 ADAM32Q8TC27 787 aa5.74□□□□□ -1.49
RNU6-840P-201ENST00000517275 CCER1Q8TC90 406 aaPredicted RBP5.74□□□□□ -1.49
RNU6-840P-201ENST00000517275 CDCA7Q9BWT1 371 aaPredicted RBP5.74□□□□□ -1.49
RNU6-840P-201ENST00000517275 UNC93B1Q9H1C4 597 aa5.74□□□□□ -1.49
RNU6-840P-201ENST00000517275 PRDM9Q9NQV7 894 aa5.74□□□□□ -1.49
RNU6-840P-201ENST00000517275 MKRN1Q9UHC7 482 aaKnown RBP5.74□□□□□ -1.49
RNU6-840P-201ENST00000517275 ZPR1O75312 459 aa5.73□□□□□ -1.49
RNU6-840P-201ENST00000517275 DKK1O94907 266 aa5.73□□□□□ -1.49
RNU6-840P-201ENST00000517275 ATP1A2P50993 1020 aa5.73□□□□□ -1.49
RNU6-840P-201ENST00000517275 EML3Q32P44 896 aa5.73□□□□□ -1.49
RNU6-840P-201ENST00000517275 CDCA8Q53HL2 280 aa5.73□□□□□ -1.49
RNU6-840P-201ENST00000517275 TRIM50Q86XT4 487 aa5.73□□□□□ -1.49
RNU6-840P-201ENST00000517275 STAC3Q96MF2 364 aa5.73□□□□□ -1.49
RNU6-840P-201ENST00000517275 ARHGAP9Q9BRR9 750 aa5.73□□□□□ -1.49
RNU6-840P-201ENST00000517275 C1QTNF2Q9BXJ5 285 aa5.73□□□□□ -1.49
RNU6-840P-201ENST00000517275 ERCC3P19447 782 aa5.72□□□□□ -1.49
RNU6-840P-201ENST00000517275 LARP1Q6PKG0 1096 aaKnown RBP5.72□□□□□ -1.49
RNU6-840P-201ENST00000517275 ANKMY2Q8IV38 441 aa5.72□□□□□ -1.49
RNU6-840P-201ENST00000517275 LARGE2Q8N3Y3 721 aa5.72□□□□□ -1.49
RNU6-840P-201ENST00000517275 SLAIN2Q9P270 581 aa5.72□□□□□ -1.49
RNU6-840P-201ENST00000517275 PCDHB9Q9Y5E1 797 aa5.72□□□□□ -1.49
RNU6-840P-201ENST00000517275 ESPNB1AK53 854 aa5.71□□□□□ -1.5
RNU6-840P-201ENST00000517275 RASA1P20936 1047 aa5.71□□□□□ -1.5
RNU6-840P-201ENST00000517275 TRMT44Q8IYL2 757 aaKnown RBP5.71□□□□□ -1.5
RNU6-840P-201ENST00000517275 SEPT12Q8IYM1 358 aa5.71□□□□□ -1.5
RNU6-840P-201ENST00000517275 DEPDC4Q8N2C3 294 aa5.71□□□□□ -1.5
RNU6-840P-201ENST00000517275 PCDH10Q9P2E7 1040 aa5.71□□□□□ -1.5
RNU6-840P-201ENST00000517275 CDV3Q9UKY7 258 aaKnown RBP5.71□□□□□ -1.5
RNU6-840P-201ENST00000517275 TLL1O43897 1013 aa5.7□□□□□ -1.5
RNU6-840P-201ENST00000517275 ARID4AP29374 1257 aaPredicted RBP5.7□□□□□ -1.5
RNU6-840P-201ENST00000517275 CLDN10P78369 228 aa5.7□□□□□ -1.5
RNU6-840P-201ENST00000517275 RNF20Q5VTR2 975 aa5.7□□□□□ -1.5
RNU6-840P-201ENST00000517275 BPHLQ86WA6 291 aaPredicted RBP5.7□□□□□ -1.5
RNU6-840P-201ENST00000517275 FAM200AQ8TCP9 573 aa5.7□□□□□ -1.5
RNU6-840P-201ENST00000517275 NOD1Q9Y239 953 aa5.7□□□□□ -1.5
RNU6-840P-201ENST00000517275 COPS2P61201 443 aa5.69□□□□□ -1.5
RNU6-840P-201ENST00000517275 NBPF20Q3BBV1 942 aa5.69□□□□□ -1.5
RNU6-840P-201ENST00000517275 ERFEQ4G0M1 354 aa5.69□□□□□ -1.5
RNU6-840P-201ENST00000517275 TJAP1Q5JTD0 557 aa5.69□□□□□ -1.5
RNU6-840P-201ENST00000517275 ANKRD13DQ6ZTN6 518 aa5.69□□□□□ -1.5
RNU6-840P-201ENST00000517275 ZBTB33Q86T24 672 aa5.69□□□□□ -1.5
RNU6-840P-201ENST00000517275 OGFOD1Q8N543 542 aa5.69□□□□□ -1.5
RNU6-840P-201ENST00000517275 MTRQ99707 1265 aa5.69□□□□□ -1.5
RNU6-840P-201ENST00000517275 KRTAP3-3Q9BYR6 98 aa5.69□□□□□ -1.5
RNU6-840P-201ENST00000517275 KRTAP3-2Q9BYR7 98 aa5.69□□□□□ -1.5
RNU6-840P-201ENST00000517275 IL21Q9HBE4 155 aa5.69□□□□□ -1.5
RNU6-840P-201ENST00000517275 DNAAF2Q9NVR5 837 aaKnown RBP5.69□□□□□ -1.5
RNU6-840P-201ENST00000517275 EGFL7Q9UHF1 273 aa5.69□□□□□ -1.5
RNU6-840P-201ENST00000517275 DOLKQ9UPQ8 538 aa5.69□□□□□ -1.5
RNU6-840P-201ENST00000517275 M0R2N6 131 aa5.68□□□□□ -1.5
RNU6-840P-201ENST00000517275 ATP2B4P23634 1241 aa5.68□□□□□ -1.5
RNU6-840P-201ENST00000517275 DPYDQ12882 1025 aa5.68□□□□□ -1.5
RNU6-840P-201ENST00000517275 FOXD4L5Q5VV16 416 aaPredicted RBP5.68□□□□□ -1.5
RNU6-840P-201ENST00000517275 PTCRAQ6ISU1 281 aaPredicted RBP5.68□□□□□ -1.5
RNU6-840P-201ENST00000517275 DNAJC14Q6Y2X3 702 aaPredicted RBP5.68□□□□□ -1.5
RNU6-840P-201ENST00000517275 DZIP3Q86Y13 1208 aaKnown RBP5.68□□□□□ -1.5
RNU6-840P-201ENST00000517275 ZNF511Q8NB15 262 aa5.68□□□□□ -1.5
RNU6-840P-201ENST00000517275 FOXD4L4Q8WXT5 416 aaPredicted RBP5.68□□□□□ -1.5
RNU6-840P-201ENST00000517275 CCDC85AQ96PX6 553 aaPredicted RBP5.68□□□□□ -1.5
RNU6-840P-201ENST00000517275 SLC6A16Q9GZN6 736 aa5.68□□□□□ -1.5
RNU6-840P-201ENST00000517275 SOWAHDA6NJG2 315 aa5.67□□□□□ -1.5
RNU6-840P-201ENST00000517275 OCLNQ16625 522 aa5.67□□□□□ -1.5
RNU6-840P-201ENST00000517275 C4orf48Q5BLP8 95 aa5.67□□□□□ -1.5
RNU6-840P-201ENST00000517275 TAS1R3Q7RTX0 852 aa5.67□□□□□ -1.5
RNU6-840P-201ENST00000517275 SIRT1Q96EB6 747 aa5.67□□□□□ -1.5
RNU6-840P-201ENST00000517275 KIAA1024Q9UPX6 916 aa5.67□□□□□ -1.5
RNU6-840P-201ENST00000517275 MAP4K5Q9Y4K4 846 aa5.67□□□□□ -1.5
RNU6-840P-201ENST00000517275 RBM47A0AV96 593 aaKnown RBP5.66□□□□□ -1.5
RNU6-840P-201ENST00000517275 ZBTB7BO15156 539 aaPredicted RBP5.66□□□□□ -1.5
RNU6-840P-201ENST00000517275 SEC13P55735 322 aa5.66□□□□□ -1.5
RNU6-840P-201ENST00000517275 GTF2IP78347 998 aa5.66□□□□□ -1.5
RNU6-840P-201ENST00000517275 SLC10A4Q96EP9 437 aa5.66□□□□□ -1.5
RNU6-840P-201ENST00000517275 FAM163AQ96GL9 167 aaPredicted RBP5.66□□□□□ -1.5
RNU6-840P-201ENST00000517275 CXXC1Q9P0U4 656 aaPredicted RBP5.66□□□□□ -1.5
RNU6-840P-201ENST00000517275 PCDHGA11Q9Y5H2 935 aa5.66□□□□□ -1.5
RNU6-840P-201ENST00000517275 POTEMA6NI47 508 aa5.65□□□□□ -1.5
RNU6-840P-201ENST00000517275 WASLO00401 505 aaPredicted RBP5.64□□□□□ -1.51
RNU6-840P-201ENST00000517275 GIGYF1O75420 1035 aaPredicted RBP5.64□□□□□ -1.51
RNU6-840P-201ENST00000517275 COL26A1Q96A83 441 aa5.64□□□□□ -1.51
RNU6-840P-201ENST00000517275 ZNF594Q96JF6 807 aaPredicted RBP5.64□□□□□ -1.51
RNU6-840P-201ENST00000517275 MAGEB6P1A0A0J9YX57 407 aa5.63□□□□□ -1.51
RNU6-840P-201ENST00000517275 E9PSI1 815 aa5.63□□□□□ -1.51
RNU6-840P-201ENST00000517275 RBM25P49756 843 aaKnown RBP5.63□□□□□ -1.51
RNU6-840P-201ENST00000517275 USP4Q13107 963 aa5.63□□□□□ -1.51
RNU6-840P-201ENST00000517275 TSGA10IPQ3SY00 556 aa5.63□□□□□ -1.51
RNU6-840P-201ENST00000517275 CCDC102BQ68D86 513 aa5.63□□□□□ -1.51
RNU6-840P-201ENST00000517275 BAP1Q92560 729 aa5.63□□□□□ -1.51
RNU6-840P-201ENST00000517275 FOXJ1Q92949 421 aa5.63□□□□□ -1.51
RNU6-840P-201ENST00000517275 CARD14Q9BXL6 1004 aa5.63□□□□□ -1.51
RNU6-840P-201ENST00000517275 FCF1Q9Y324 198 aaKnown RBP5.63□□□□□ -1.51
RNU6-840P-201ENST00000517275 WEE1P30291 646 aa5.62□□□□□ -1.51
RNU6-840P-201ENST00000517275 SERPINB4P48594 390 aa5.62□□□□□ -1.51
RNU6-840P-201ENST00000517275 WNT7BP56706 349 aa5.62□□□□□ -1.51
RNU6-840P-201ENST00000517275 SH3BP2P78314 561 aa5.62□□□□□ -1.51
RNU6-840P-201ENST00000517275 OXLD1Q5BKU9 147 aa5.62□□□□□ -1.51
RNU6-840P-201ENST00000517275 CCDC24Q8N4L8 307 aa5.62□□□□□ -1.51
RNU6-840P-201ENST00000517275 ZNF516Q92618 1163 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms