RNA–Protein interactions for RNA: ENST00000516107.1

RNU1-61P-201, Transcript of RNA, U1 small nuclear 61, pseudogene, humanhuman

BASIC

Gene RNU1-61P, Length 151 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-61P-201ENST00000516107 DEPDC4Q8N2C3 294 aa4.66□□□□□ -1.66
RNU1-61P-201ENST00000516107 TTC13Q8NBP0 860 aa4.66□□□□□ -1.66
RNU1-61P-201ENST00000516107 STAG1Q8WVM7 1258 aa4.66□□□□□ -1.66
RNU1-61P-201ENST00000516107 RNF34Q969K3 372 aa4.66□□□□□ -1.66
RNU1-61P-201ENST00000516107 IRF2BPLQ9H1B7 796 aa4.66□□□□□ -1.66
RNU1-61P-201ENST00000516107 ZBTB3Q9H5J0 574 aa4.66□□□□□ -1.66
RNU1-61P-201ENST00000516107 TUT1Q9H6E5 874 aaKnown RBP4.66□□□□□ -1.66
RNU1-61P-201ENST00000516107 CCSER2Q9H7U1 834 aa4.66□□□□□ -1.66
RNU1-61P-201ENST00000516107 USP17L5A8MUK1 530 aa4.65□□□□□ -1.67
RNU1-61P-201ENST00000516107 U2SURPO15042 1029 aaKnown RBP4.65□□□□□ -1.67
RNU1-61P-201ENST00000516107 CREB3O43889 395 aa4.65□□□□□ -1.67
RNU1-61P-201ENST00000516107 P4HBP07237 508 aaKnown RBP4.65□□□□□ -1.67
RNU1-61P-201ENST00000516107 DNAJA1P31689 397 aaKnown RBP4.65□□□□□ -1.67
RNU1-61P-201ENST00000516107 ARHGAP4P98171 946 aa4.65□□□□□ -1.67
RNU1-61P-201ENST00000516107 SLFNL1Q499Z3 407 aa4.65□□□□□ -1.67
RNU1-61P-201ENST00000516107 GLYCTKQ8IVS8 523 aa4.65□□□□□ -1.67
RNU1-61P-201ENST00000516107 TMTC2Q8N394 836 aa4.65□□□□□ -1.67
RNU1-61P-201ENST00000516107 OSBPL2Q9H1P3 480 aa4.65□□□□□ -1.67
RNU1-61P-201ENST00000516107 G3BP2Q9UN86 482 aaKnown RBP4.65□□□□□ -1.67
RNU1-61P-201ENST00000516107 MRPL42Q9Y6G3 142 aaKnown RBP4.65□□□□□ -1.67
RNU1-61P-201ENST00000516107 DPYDQ12882 1025 aa4.64□□□□□ -1.67
RNU1-61P-201ENST00000516107 SWI5Q1ZZU3 235 aa4.64□□□□□ -1.67
RNU1-61P-201ENST00000516107 FILIP1Q7Z7B0 1213 aa4.64□□□□□ -1.67
RNU1-61P-201ENST00000516107 RGL4Q8IZJ4 473 aa4.64□□□□□ -1.67
RNU1-61P-201ENST00000516107 FAM174AQ8TBP5 190 aa4.64□□□□□ -1.67
RNU1-61P-201ENST00000516107 FAM161BQ96MY7 647 aa4.64□□□□□ -1.67
RNU1-61P-201ENST00000516107 METTL5Q9NRN9 209 aaKnown RBP4.64□□□□□ -1.67
RNU1-61P-201ENST00000516107 RNF19AQ9NV58 838 aa4.64□□□□□ -1.67
RNU1-61P-201ENST00000516107 DDX56Q9NY93 547 aaKnown RBP4.64□□□□□ -1.67
RNU1-61P-201ENST00000516107 PCDHGC3Q9UN70 934 aa4.64□□□□□ -1.67
RNU1-61P-201ENST00000516107 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.64□□□□□ -1.67
RNU1-61P-201ENST00000516107 PCDHGA10Q9Y5H3 936 aa4.64□□□□□ -1.67
RNU1-61P-201ENST00000516107 PITPNM1O00562 1244 aa4.63□□□□□ -1.67
RNU1-61P-201ENST00000516107 HOXA2O43364 376 aa4.63□□□□□ -1.67
RNU1-61P-201ENST00000516107 C21orf2O43822 256 aa4.63□□□□□ -1.67
RNU1-61P-201ENST00000516107 FKBP4Q02790 459 aaKnown RBP eCLIP4.63□□□□□ -1.67
RNU1-61P-201ENST00000516107 ARID5AQ03989 594 aa4.63□□□□□ -1.67
RNU1-61P-201ENST00000516107 GNL2Q13823 731 aaKnown RBP4.63□□□□□ -1.67
RNU1-61P-201ENST00000516107 NR6A1Q15406 480 aa4.63□□□□□ -1.67
RNU1-61P-201ENST00000516107 GPATCH11Q8N954 259 aa4.63□□□□□ -1.67
RNU1-61P-201ENST00000516107 SLAIN1Q8ND83 568 aa4.63□□□□□ -1.67
RNU1-61P-201ENST00000516107 PNMA1Q8ND90 353 aa4.63□□□□□ -1.67
RNU1-61P-201ENST00000516107 TMEM121BQ9BXQ6 578 aaPredicted RBP4.63□□□□□ -1.67
RNU1-61P-201ENST00000516107 MAF1Q9H063 256 aa4.63□□□□□ -1.67
RNU1-61P-201ENST00000516107 PARP2Q9UGN5 583 aa4.63□□□□□ -1.67
RNU1-61P-201ENST00000516107 TRPC6Q9Y210 931 aa4.63□□□□□ -1.67
RNU1-61P-201ENST00000516107 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.62□□□□□ -1.67
RNU1-61P-201ENST00000516107 RCCD1A6NED2 376 aa4.62□□□□□ -1.67
RNU1-61P-201ENST00000516107 DDX11L8A8MPP1 907 aa4.62□□□□□ -1.67
RNU1-61P-201ENST00000516107 PRMT3O60678 531 aa4.62□□□□□ -1.67
RNU1-61P-201ENST00000516107 PAX3P23760 479 aa4.62□□□□□ -1.67
RNU1-61P-201ENST00000516107 RHBDL3P58872 404 aa4.62□□□□□ -1.67
RNU1-61P-201ENST00000516107 NR1H3Q13133 447 aa4.62□□□□□ -1.67
RNU1-61P-201ENST00000516107 SLF2Q8IX21 1173 aa4.62□□□□□ -1.67
RNU1-61P-201ENST00000516107 CCDC146Q8IYE0 955 aa4.62□□□□□ -1.67
RNU1-61P-201ENST00000516107 GTF3C2Q8WUA4 911 aaPredicted RBP4.62□□□□□ -1.67
RNU1-61P-201ENST00000516107 PRIMPOLQ96LW4 560 aa4.62□□□□□ -1.67
RNU1-61P-201ENST00000516107 PNMA2Q9UL42 364 aa4.62□□□□□ -1.67
RNU1-61P-201ENST00000516107 PRR12Q9ULL5 1215 aa4.62□□□□□ -1.67
RNU1-61P-201ENST00000516107 DNMT3AQ9Y6K1 912 aaPredicted RBP4.62□□□□□ -1.67
RNU1-61P-201ENST00000516107 HMGB1P1B2RPK0 211 aaPredicted RBP4.61□□□□□ -1.67
RNU1-61P-201ENST00000516107 ATP5J2-PTCD1G3V325 749 aa4.61□□□□□ -1.67
RNU1-61P-201ENST00000516107 SH3BP5O60239 455 aa4.61□□□□□ -1.67
RNU1-61P-201ENST00000516107 DNAJC6O75061 913 aa4.61□□□□□ -1.67
RNU1-61P-201ENST00000516107 FDX1P10109 184 aa4.61□□□□□ -1.67
RNU1-61P-201ENST00000516107 XRCC5P13010 732 aaKnown RBP4.61□□□□□ -1.67
RNU1-61P-201ENST00000516107 ZNF76P36508 570 aa4.61□□□□□ -1.67
RNU1-61P-201ENST00000516107 XPCQ01831 940 aaPredicted RBP4.61□□□□□ -1.67
RNU1-61P-201ENST00000516107 FOXD4Q12950 439 aaPredicted RBP4.61□□□□□ -1.67
RNU1-61P-201ENST00000516107 OCLNQ16625 522 aa4.61□□□□□ -1.67
RNU1-61P-201ENST00000516107 ZFYVE27Q5T4F4 411 aa4.61□□□□□ -1.67
RNU1-61P-201ENST00000516107 TSHZ1Q6ZSZ6 1077 aa4.61□□□□□ -1.67
RNU1-61P-201ENST00000516107 TMC4Q7Z404 712 aa4.61□□□□□ -1.67
RNU1-61P-201ENST00000516107 RNF135Q8IUD6 432 aa4.61□□□□□ -1.67
RNU1-61P-201ENST00000516107 FMNL3Q8IVF7 1028 aa4.61□□□□□ -1.67
RNU1-61P-201ENST00000516107 CCAR1Q8IX12 1150 aaKnown RBP4.61□□□□□ -1.67
RNU1-61P-201ENST00000516107 HELBQ8NG08 1087 aaPredicted RBP4.61□□□□□ -1.67
RNU1-61P-201ENST00000516107 SPC25Q9HBM1 224 aa4.61□□□□□ -1.67
RNU1-61P-201ENST00000516107 CXXC1Q9P0U4 656 aaPredicted RBP4.61□□□□□ -1.67
RNU1-61P-201ENST00000516107 CFAP99D6REC4 459 aa4.6□□□□□ -1.67
RNU1-61P-201ENST00000516107 ENPP3O14638 875 aa4.6□□□□□ -1.67
RNU1-61P-201ENST00000516107 PAK3O75914 559 aaPredicted RBP4.6□□□□□ -1.67
RNU1-61P-201ENST00000516107 DKK1O94907 266 aa4.6□□□□□ -1.67
RNU1-61P-201ENST00000516107 FMNL1O95466 1100 aaPredicted RBP4.6□□□□□ -1.67
RNU1-61P-201ENST00000516107 APLP1P51693 650 aa4.6□□□□□ -1.67
RNU1-61P-201ENST00000516107 TBX4P57082 545 aa4.6□□□□□ -1.67
RNU1-61P-201ENST00000516107 DAB2P98082 770 aa4.6□□□□□ -1.67
RNU1-61P-201ENST00000516107 AMPD3Q01432 767 aa4.6□□□□□ -1.67
RNU1-61P-201ENST00000516107 CACNB1Q02641 598 aaPredicted RBP4.6□□□□□ -1.67
RNU1-61P-201ENST00000516107 BIRC2Q13490 618 aa4.6□□□□□ -1.67
RNU1-61P-201ENST00000516107 NCOA4Q13772 614 aa4.6□□□□□ -1.67
RNU1-61P-201ENST00000516107 LONRF3Q496Y0 759 aa4.6□□□□□ -1.67
RNU1-61P-201ENST00000516107 CLEC4GQ6UXB4 293 aa4.6□□□□□ -1.67
RNU1-61P-201ENST00000516107 TMC7Q7Z402 723 aa4.6□□□□□ -1.67
RNU1-61P-201ENST00000516107 MCF2L2Q86YR7 1114 aa4.6□□□□□ -1.67
RNU1-61P-201ENST00000516107 SULF1Q8IWU6 871 aa4.6□□□□□ -1.67
RNU1-61P-201ENST00000516107 CERKQ8TCT0 537 aa4.6□□□□□ -1.67
RNU1-61P-201ENST00000516107 TSC1Q92574 1164 aa4.6□□□□□ -1.67
RNU1-61P-201ENST00000516107 PKNOX2Q96KN3 472 aa4.6□□□□□ -1.67
RNU1-61P-201ENST00000516107 DUSP9Q99956 384 aaKnown RBP4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms