RNA–Protein interactions for RNA: ENST00000515289.2

NPHP3-211, Transcript of nephrocystin 3, humanhuman

TSL 3

Gene NPHP3, Length 556 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-211ENST00000515289 SIX5Q8N196 739 aa10.1□□□□□ -0.79
NPHP3-211ENST00000515289 ZNF594Q96JF6 807 aaPredicted RBP10.1□□□□□ -0.79
NPHP3-211ENST00000515289 KCNK17Q96T54 332 aa10.1□□□□□ -0.79
NPHP3-211ENST00000515289 ZBED2Q9BTP6 218 aa10.1□□□□□ -0.79
NPHP3-211ENST00000515289 C21orf2O43822 256 aa10.09□□□□□ -0.79
NPHP3-211ENST00000515289 SMARCA5O60264 1052 aaPredicted RBP10.09□□□□□ -0.79
NPHP3-211ENST00000515289 PRMT3O60678 531 aa10.09□□□□□ -0.79
NPHP3-211ENST00000515289 DKK1O94907 266 aa10.09□□□□□ -0.79
NPHP3-211ENST00000515289 TAGLNQ01995 201 aaKnown RBP10.09□□□□□ -0.79
NPHP3-211ENST00000515289 ZNF211Q13398 564 aaPredicted RBP10.09□□□□□ -0.79
NPHP3-211ENST00000515289 KMT5BQ4FZB7 885 aa10.09□□□□□ -0.79
NPHP3-211ENST00000515289 TRAF7Q6Q0C0 670 aa10.09□□□□□ -0.79
NPHP3-211ENST00000515289 ZSCAN29Q8IWY8 852 aaPredicted RBP10.09□□□□□ -0.79
NPHP3-211ENST00000515289 KCNH8Q96L42 1107 aa10.09□□□□□ -0.79
NPHP3-211ENST00000515289 PTK2Q05397 1052 aa10.08□□□□□ -0.8
NPHP3-211ENST00000515289 RABGEF1Q9UJ41 708 aa10.08□□□□□ -0.8
NPHP3-211ENST00000515289 NOD1Q9Y239 953 aa10.08□□□□□ -0.8
NPHP3-211ENST00000515289 SLC27A5Q9Y2P5 690 aa10.08□□□□□ -0.8
NPHP3-211ENST00000515289 MROH2BQ7Z745 1585 aa10.08□□□□□ -0.8
NPHP3-211ENST00000515289 SEC13P55735 322 aa10.06□□□□□ -0.8
NPHP3-211ENST00000515289 FAM98CQ17RN3 349 aaKnown RBP10.06□□□□□ -0.8
NPHP3-211ENST00000515289 TSNAXIP1Q2TAA8 658 aa10.06□□□□□ -0.8
NPHP3-211ENST00000515289 GPKOWQ92917 476 aaPredicted RBP eCLIP10.06□□□□□ -0.8
NPHP3-211ENST00000515289 MAP10Q9P2G4 905 aa10.06□□□□□ -0.8
NPHP3-211ENST00000515289 SEPT9Q9UHD8 586 aaPredicted RBP10.06□□□□□ -0.8
NPHP3-211ENST00000515289 PCDHB9Q9Y5E1 797 aa10.06□□□□□ -0.8
NPHP3-211ENST00000515289 PPM1GO15355 546 aaPredicted RBP10.05□□□□□ -0.8
NPHP3-211ENST00000515289 ECM1Q16610 540 aa10.05□□□□□ -0.8
NPHP3-211ENST00000515289 PTPRNQ16849 979 aa10.05□□□□□ -0.8
NPHP3-211ENST00000515289 EAPPQ56P03 285 aaPredicted RBP10.05□□□□□ -0.8
NPHP3-211ENST00000515289 PDXDC2PQ6P474 469 aa10.05□□□□□ -0.8
NPHP3-211ENST00000515289 USB1Q9BQ65 265 aaKnown RBP10.05□□□□□ -0.8
NPHP3-211ENST00000515289 ANO2Q9NQ90 1003 aa10.05□□□□□ -0.8
NPHP3-211ENST00000515289 CADPSQ9ULU8 1353 aa10.04□□□□□ -0.8
NPHP3-211ENST00000515289 ERCC5P28715 1186 aaPredicted RBP10.04□□□□□ -0.8
NPHP3-211ENST00000515289 SF3B2Q13435 895 aaKnown RBP10.04□□□□□ -0.8
NPHP3-211ENST00000515289 RGL4Q8IZJ4 473 aa10.04□□□□□ -0.8
NPHP3-211ENST00000515289 PRIMPOLQ96LW4 560 aa10.04□□□□□ -0.8
NPHP3-211ENST00000515289 ZBTB7BO15156 539 aaPredicted RBP10.03□□□□□ -0.8
NPHP3-211ENST00000515289 ACTN4O43707 911 aaKnown RBP10.03□□□□□ -0.8
NPHP3-211ENST00000515289 ARHGAP4P98171 946 aa10.03□□□□□ -0.8
NPHP3-211ENST00000515289 SAMD7Q7Z3H4 446 aa10.03□□□□□ -0.8
NPHP3-211ENST00000515289 ARMC2Q8NEN0 867 aa10.03□□□□□ -0.8
NPHP3-211ENST00000515289 GTF3C2Q8WUA4 911 aaPredicted RBP10.03□□□□□ -0.8
NPHP3-211ENST00000515289 OCSTAMPQ9BR26 566 aa10.03□□□□□ -0.8
NPHP3-211ENST00000515289 PPP1R1BQ9UD71 204 aaPredicted RBP10.03□□□□□ -0.8
NPHP3-211ENST00000515289 KIAA1024Q9UPX6 916 aa10.03□□□□□ -0.8
NPHP3-211ENST00000515289 SALL2Q9Y467 1007 aaPredicted RBP10.03□□□□□ -0.8
NPHP3-211ENST00000515289 RBM19Q9Y4C8 960 aaKnown RBP10.03□□□□□ -0.8
NPHP3-211ENST00000515289 BAZ1AQ9NRL2 1556 aaPredicted RBP10.02□□□□□ -0.81
NPHP3-211ENST00000515289 FKBP4Q02790 459 aaKnown RBP eCLIP10.02□□□□□ -0.81
NPHP3-211ENST00000515289 MRPL58Q14197 206 aaKnown RBP10.02□□□□□ -0.81
NPHP3-211ENST00000515289 RNF19BQ6ZMZ0 732 aa10.02□□□□□ -0.81
NPHP3-211ENST00000515289 SCAMP3O14828 347 aaKnown RBP10.01□□□□□ -0.81
NPHP3-211ENST00000515289 PUS10Q3MIT2 529 aaKnown RBP10.01□□□□□ -0.81
NPHP3-211ENST00000515289 SLC4A5Q9BY07 1137 aa10.01□□□□□ -0.81
NPHP3-211ENST00000515289 BACH2Q9BYV9 841 aa10.01□□□□□ -0.81
NPHP3-211ENST00000515289 JUNDP17535 347 aa10□□□□□ -0.81
NPHP3-211ENST00000515289 GTF2IP78347 998 aa10□□□□□ -0.81
NPHP3-211ENST00000515289 DOLKQ9UPQ8 538 aa10□□□□□ -0.81
NPHP3-211ENST00000515289 DNMT3AQ9Y6K1 912 aaPredicted RBP10□□□□□ -0.81
NPHP3-211ENST00000515289 NCLP19338 710 aaKnown RBP9.99□□□□□ -0.81
NPHP3-211ENST00000515289 CTHP32929 405 aa9.99□□□□□ -0.81
NPHP3-211ENST00000515289 HDLBPQ00341 1268 aaKnown RBP9.99□□□□□ -0.81
NPHP3-211ENST00000515289 TSGA10IPQ3SY00 556 aa9.99□□□□□ -0.81
NPHP3-211ENST00000515289 NBPF14Q5TI25 921 aa9.99□□□□□ -0.81
NPHP3-211ENST00000515289 CCDC102BQ68D86 513 aa9.99□□□□□ -0.81
NPHP3-211ENST00000515289 BRICD5Q6PL45 260 aa9.99□□□□□ -0.81
NPHP3-211ENST00000515289 BLOC1S3Q6QNY0 202 aa9.99□□□□□ -0.81
NPHP3-211ENST00000515289 SMARCA4P51532 1647 aa9.98□□□□□ -0.81
NPHP3-211ENST00000515289 RNF40O75150 1001 aa9.98□□□□□ -0.81
NPHP3-211ENST00000515289 LAPTM4BQ86VI4 370 aa9.98□□□□□ -0.81
NPHP3-211ENST00000515289 SEPT3Q9UH03 358 aa9.98□□□□□ -0.81
NPHP3-211ENST00000515289 PTCD1O75127 700 aaKnown RBP9.97□□□□□ -0.81
NPHP3-211ENST00000515289 ADAM32Q8TC27 787 aa9.97□□□□□ -0.81
NPHP3-211ENST00000515289 PRR14Q9BWN1 585 aa9.97□□□□□ -0.81
NPHP3-211ENST00000515289 SFI1A8K8P3 1242 aa9.96□□□□□ -0.82
NPHP3-211ENST00000515289 TPCN2Q8NHX9 752 aa9.96□□□□□ -0.82
NPHP3-211ENST00000515289 SP7Q8TDD2 431 aaPredicted RBP9.96□□□□□ -0.82
NPHP3-211ENST00000515289 PIK3R5Q8WYR1 880 aa9.96□□□□□ -0.82
NPHP3-211ENST00000515289 CCDC85AQ96PX6 553 aaPredicted RBP9.96□□□□□ -0.82
NPHP3-211ENST00000515289 WIZO95785 1651 aa9.96□□□□□ -0.82
NPHP3-211ENST00000515289 FMNL1O95466 1100 aaPredicted RBP9.95□□□□□ -0.82
NPHP3-211ENST00000515289 P4HBP07237 508 aaKnown RBP9.95□□□□□ -0.82
NPHP3-211ENST00000515289 CCNYL3P0C7X3 344 aa9.95□□□□□ -0.82
NPHP3-211ENST00000515289 WEE1P30291 646 aa9.95□□□□□ -0.82
NPHP3-211ENST00000515289 COL26A1Q96A83 441 aa9.95□□□□□ -0.82
NPHP3-211ENST00000515289 RBCK1Q9BYM8 510 aa9.95□□□□□ -0.82
NPHP3-211ENST00000515289 OXLD1Q5BKU9 147 aa9.94□□□□□ -0.82
NPHP3-211ENST00000515289 ARHGAP9Q9BRR9 750 aa9.94□□□□□ -0.82
NPHP3-211ENST00000515289 CHMP4AQ9BY43 222 aa9.94□□□□□ -0.82
NPHP3-211ENST00000515289 EVA1BQ9NVM1 165 aa9.94□□□□□ -0.82
NPHP3-211ENST00000515289 HOXB1P14653 301 aaPredicted RBP9.93□□□□□ -0.82
NPHP3-211ENST00000515289 NPR3P17342 541 aa9.93□□□□□ -0.82
NPHP3-211ENST00000515289 PSEN2P49810 448 aa9.93□□□□□ -0.82
NPHP3-211ENST00000515289 FGD1P98174 961 aa9.93□□□□□ -0.82
NPHP3-211ENST00000515289 RAD51AP2Q09MP3 1159 aa9.93□□□□□ -0.82
NPHP3-211ENST00000515289 MTMR3Q13615 1198 aa9.93□□□□□ -0.82
NPHP3-211ENST00000515289 LDLRAD1Q5T700 205 aa9.93□□□□□ -0.82
NPHP3-211ENST00000515289 THAP11Q96EK4 314 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms