RNA–Protein interactions for RNA: ENST00000515174.5

SNF8-214, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 823 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-214ENST00000515174 CDCA7LQ96GN5 454 aa13.43□□□□□ -0.26
SNF8-214ENST00000515174 RCAN3Q9UKA8 241 aa13.43□□□□□ -0.26
SNF8-214ENST00000515174 E9PSI1 815 aa13.42□□□□□ -0.26
SNF8-214ENST00000515174 FCHSD2O94868 740 aa13.42□□□□□ -0.26
SNF8-214ENST00000515174 NME9Q86XW9 330 aa13.42□□□□□ -0.26
SNF8-214ENST00000515174 PELP1Q8IZL8 1130 aaKnown RBP13.42□□□□□ -0.26
SNF8-214ENST00000515174 OVOS2A0A0J9YW53 1432 aa13.41□□□□□ -0.26
SNF8-214ENST00000515174 OVOS2Q6IE36 1432 aa13.41□□□□□ -0.26
SNF8-214ENST00000515174 WWC1Q8IX03 1113 aa13.41□□□□□ -0.26
SNF8-214ENST00000515174 PLEKHF1Q96S99 279 aa13.41□□□□□ -0.26
SNF8-214ENST00000515174 PPP4R2Q9NY27 417 aa13.41□□□□□ -0.26
SNF8-214ENST00000515174 USP21Q9UK80 565 aa13.41□□□□□ -0.26
SNF8-214ENST00000515174 PXDNQ92626 1479 aa13.41□□□□□ -0.26
SNF8-214ENST00000515174 PEAK1Q9H792 1746 aa13.4□□□□□ -0.26
SNF8-214ENST00000515174 U2AF1L5P0DN76 240 aaPredicted RBP13.4□□□□□ -0.26
SNF8-214ENST00000515174 U2AF1Q01081 240 aaKnown RBP eCLIP13.4□□□□□ -0.26
SNF8-214ENST00000515174 CCDC146Q8IYE0 955 aa13.4□□□□□ -0.26
SNF8-214ENST00000515174 TCP11L2Q8N4U5 519 aa13.4□□□□□ -0.26
SNF8-214ENST00000515174 TRPC5Q9UL62 973 aaPredicted RBP13.4□□□□□ -0.26
SNF8-214ENST00000515174 PHF8Q9UPP1 1060 aa13.4□□□□□ -0.26
SNF8-214ENST00000515174 SALL2Q9Y467 1007 aaPredicted RBP13.4□□□□□ -0.26
SNF8-214ENST00000515174 ORAI2Q96SN7 254 aa13.39□□□□□ -0.27
SNF8-214ENST00000515174 ESCO1Q5FWF5 840 aa13.38□□□□□ -0.27
SNF8-214ENST00000515174 NGDNQ8NEJ9 315 aaKnown RBP13.38□□□□□ -0.27
SNF8-214ENST00000515174 IL13P35225 146 aa13.37□□□□□ -0.27
SNF8-214ENST00000515174 RRP1P56182 461 aaKnown RBP13.37□□□□□ -0.27
SNF8-214ENST00000515174 KIF24Q5T7B8 1368 aa13.36□□□□□ -0.27
SNF8-214ENST00000515174 SLIT3O75094 1523 aa13.36□□□□□ -0.27
SNF8-214ENST00000515174 NFAT5O94916 1531 aa13.36□□□□□ -0.27
SNF8-214ENST00000515174 IL16Q14005 1332 aa13.36□□□□□ -0.27
SNF8-214ENST00000515174 TMPOP42166 694 aaKnown RBP13.35□□□□□ -0.27
SNF8-214ENST00000515174 RGPD5Q99666 1765 aa13.35□□□□□ -0.27
SNF8-214ENST00000515174 TNS3Q68CZ2 1445 aa13.34□□□□□ -0.27
SNF8-214ENST00000515174 SENP3-EIF4A1A0A087X0R7 540 aa13.34□□□□□ -0.27
SNF8-214ENST00000515174 XPCQ01831 940 aaPredicted RBP13.34□□□□□ -0.27
SNF8-214ENST00000515174 RSPH6AQ9H0K4 717 aa13.34□□□□□ -0.27
SNF8-214ENST00000515174 COL22A1Q8NFW1 1626 aaPredicted RBP13.33□□□□□ -0.28
SNF8-214ENST00000515174 U2SURPO15042 1029 aaKnown RBP13.33□□□□□ -0.28
SNF8-214ENST00000515174 CT47B1P0C2W7 299 aaPredicted RBP13.33□□□□□ -0.28
SNF8-214ENST00000515174 CCDC125Q86Z20 511 aa13.33□□□□□ -0.28
SNF8-214ENST00000515174 EMILIN1Q9Y6C2 1016 aa13.33□□□□□ -0.28
SNF8-214ENST00000515174 FNBP4Q8N3X1 1017 aaPredicted RBP13.32□□□□□ -0.28
SNF8-214ENST00000515174 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.32□□□□□ -0.28
SNF8-214ENST00000515174 SPINK5Q9NQ38 1064 aaPredicted RBP13.32□□□□□ -0.28
SNF8-214ENST00000515174 MAPK8IP3Q9UPT6 1336 aa13.32□□□□□ -0.28
SNF8-214ENST00000515174 RGPD2P0DJD1 1756 aa13.31□□□□□ -0.28
SNF8-214ENST00000515174 FOXO3O43524 673 aa13.31□□□□□ -0.28
SNF8-214ENST00000515174 NEFMP07197 916 aa13.31□□□□□ -0.28
SNF8-214ENST00000515174 MYH16Q9H6N6 1097 aa13.31□□□□□ -0.28
SNF8-214ENST00000515174 SOS2Q07890 1332 aaPredicted RBP13.31□□□□□ -0.28
SNF8-214ENST00000515174 FBLN1P23142 703 aa13.3□□□□□ -0.28
SNF8-214ENST00000515174 TRIM35Q9UPQ4 493 aa13.3□□□□□ -0.28
SNF8-214ENST00000515174 NPHP3Q7Z494 1330 aa13.3□□□□□ -0.28
SNF8-214ENST00000515174 RGPD1P0DJD0 1748 aa13.3□□□□□ -0.28
SNF8-214ENST00000515174 ATRNO75882 1429 aa13.3□□□□□ -0.28
SNF8-214ENST00000515174 IRX6P78412 446 aaPredicted RBP13.29□□□□□ -0.28
SNF8-214ENST00000515174 RRS1Q15050 365 aaKnown RBP13.29□□□□□ -0.28
SNF8-214ENST00000515174 SBNO1A3KN83 1393 aa13.29□□□□□ -0.28
SNF8-214ENST00000515174 COL18A1P39060 1754 aa13.28□□□□□ -0.28
SNF8-214ENST00000515174 PPM1GO15355 546 aaPredicted RBP13.28□□□□□ -0.28
SNF8-214ENST00000515174 PAK3O75914 559 aaPredicted RBP13.28□□□□□ -0.28
SNF8-214ENST00000515174 CALD1Q05682 793 aaKnown RBP13.28□□□□□ -0.28
SNF8-214ENST00000515174 SF3B2Q13435 895 aaKnown RBP13.28□□□□□ -0.28
SNF8-214ENST00000515174 NFE2L2Q16236 605 aa13.28□□□□□ -0.28
SNF8-214ENST00000515174 PRKAR2BP31323 418 aa13.27□□□□□ -0.29
SNF8-214ENST00000515174 RIPK4P57078 832 aa13.27□□□□□ -0.29
SNF8-214ENST00000515174 NLRP6P59044 892 aa13.27□□□□□ -0.29
SNF8-214ENST00000515174 PSME1Q06323 249 aa13.27□□□□□ -0.29
SNF8-214ENST00000515174 EIF4A2Q14240 407 aaKnown RBP13.27□□□□□ -0.29
SNF8-214ENST00000515174 NUTM2GQ5VZR2 741 aa13.27□□□□□ -0.29
SNF8-214ENST00000515174 KRT28Q7Z3Y7 464 aa13.27□□□□□ -0.29
SNF8-214ENST00000515174 GJD4Q96KN9 370 aaPredicted RBP13.27□□□□□ -0.29
SNF8-214ENST00000515174 FLT4P35916 1363 aa13.27□□□□□ -0.29
SNF8-214ENST00000515174 SRCAPQ6ZRS2 3230 aa13.26□□□□□ -0.29
SNF8-214ENST00000515174 LMOD3Q0VAK6 560 aa13.26□□□□□ -0.29
SNF8-214ENST00000515174 NEUROD2Q15784 382 aa13.26□□□□□ -0.29
SNF8-214ENST00000515174 PLCH1Q4KWH8 1693 aa13.26□□□□□ -0.29
SNF8-214ENST00000515174 MAP3K19Q56UN5 1328 aa13.26□□□□□ -0.29
SNF8-214ENST00000515174 ABTB2Q8N961 1025 aa13.26□□□□□ -0.29
SNF8-214ENST00000515174 FAM208AQ9UK61 1670 aaKnown RBP13.26□□□□□ -0.29
SNF8-214ENST00000515174 RRP7AQ9Y3A4 280 aaKnown RBP13.26□□□□□ -0.29
SNF8-214ENST00000515174 CAMTA1Q9Y6Y1 1673 aa13.25□□□□□ -0.29
SNF8-214ENST00000515174 RTL1A6NKG5 1358 aa13.25□□□□□ -0.29
SNF8-214ENST00000515174 ARHGEF10O15013 1369 aa13.25□□□□□ -0.29
SNF8-214ENST00000515174 USP19O94966 1318 aa13.25□□□□□ -0.29
SNF8-214ENST00000515174 PDE3AQ14432 1141 aa13.25□□□□□ -0.29
SNF8-214ENST00000515174 KCNH5Q8NCM2 988 aa13.25□□□□□ -0.29
SNF8-214ENST00000515174 ZNF428Q96B54 188 aa13.25□□□□□ -0.29
SNF8-214ENST00000515174 LMO7Q8WWI1 1683 aa13.24□□□□□ -0.29
SNF8-214ENST00000515174 KDRP35968 1356 aa13.24□□□□□ -0.29
SNF8-214ENST00000515174 SOX12O15370 315 aa13.24□□□□□ -0.29
SNF8-214ENST00000515174 SPATA31A3Q5VYP0 1347 aa13.23□□□□□ -0.29
SNF8-214ENST00000515174 HAP1P54257 671 aaPredicted RBP13.23□□□□□ -0.29
SNF8-214ENST00000515174 AAMPQ13685 434 aa13.23□□□□□ -0.29
SNF8-214ENST00000515174 HSP90AB2PQ58FF8 381 aa13.23□□□□□ -0.29
SNF8-214ENST00000515174 DEFB132Q7Z7B7 95 aa13.23□□□□□ -0.29
SNF8-214ENST00000515174 PHACTR3Q96KR7 559 aa13.23□□□□□ -0.29
SNF8-214ENST00000515174 ABCC6O95255 1503 aa13.23□□□□□ -0.29
SNF8-214ENST00000515174 BCL9LQ86UU0 1499 aa13.23□□□□□ -0.29
SNF8-214ENST00000515174 WNK3Q9BYP7 1800 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms