RNA–Protein interactions for RNA: ENST00000513450.1

RNF4-219, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 416 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-219ENST00000513450 RC3H1Q5TC82 1133 aaKnown RBP4.47□□□□□ -1.69
RNF4-219ENST00000513450 RNF20Q5VTR2 975 aa4.47□□□□□ -1.69
RNF4-219ENST00000513450 SPRYD7Q5W111 196 aa4.47□□□□□ -1.69
RNF4-219ENST00000513450 SEPT12Q8IYM1 358 aa4.47□□□□□ -1.69
RNF4-219ENST00000513450 PHTF2Q8N3S3 785 aa4.47□□□□□ -1.69
RNF4-219ENST00000513450 MPNDQ8N594 471 aa4.47□□□□□ -1.69
RNF4-219ENST00000513450 EHBP1Q8NDI1 1231 aa4.47□□□□□ -1.69
RNF4-219ENST00000513450 EMID1Q96A84 441 aaPredicted RBP4.47□□□□□ -1.69
RNF4-219ENST00000513450 TFIP11Q9UBB9 837 aaKnown RBP4.47□□□□□ -1.69
RNF4-219ENST00000513450 WNT7AO00755 349 aa4.46□□□□□ -1.7
RNF4-219ENST00000513450 LZTS3O60299 673 aaPredicted RBP4.46□□□□□ -1.7
RNF4-219ENST00000513450 MAP7D1Q3KQU3 841 aa4.46□□□□□ -1.7
RNF4-219ENST00000513450 CFAP70Q5T0N1 1121 aa4.46□□□□□ -1.7
RNF4-219ENST00000513450 ZNF598Q86UK7 904 aaKnown RBP4.46□□□□□ -1.7
RNF4-219ENST00000513450 RNF135Q8IUD6 432 aa4.46□□□□□ -1.7
RNF4-219ENST00000513450 HOMEZQ8IX15 550 aa4.46□□□□□ -1.7
RNF4-219ENST00000513450 CDK15Q96Q40 435 aa4.46□□□□□ -1.7
RNF4-219ENST00000513450 CHIC2Q9UKJ5 165 aa4.46□□□□□ -1.7
RNF4-219ENST00000513450 ESPNB1AK53 854 aa4.45□□□□□ -1.7
RNF4-219ENST00000513450 SKIP12755 728 aa4.45□□□□□ -1.7
RNF4-219ENST00000513450 PKDCCQ504Y2 493 aa4.45□□□□□ -1.7
RNF4-219ENST00000513450 TBC1D9Q6ZT07 1266 aa4.45□□□□□ -1.7
RNF4-219ENST00000513450 VASH1Q7L8A9 365 aaPredicted RBP4.45□□□□□ -1.7
RNF4-219ENST00000513450 PLEKHM2Q8IWE5 1019 aa4.45□□□□□ -1.7
RNF4-219ENST00000513450 TRIM52Q96A61 297 aa4.45□□□□□ -1.7
RNF4-219ENST00000513450 PBXIP1Q96AQ6 731 aa4.45□□□□□ -1.7
RNF4-219ENST00000513450 MAFBQ9Y5Q3 323 aaPredicted RBP4.45□□□□□ -1.7
RNF4-219ENST00000513450 PIK3CDO00329 1044 aa4.44□□□□□ -1.7
RNF4-219ENST00000513450 SIAH2O43255 324 aa4.44□□□□□ -1.7
RNF4-219ENST00000513450 GIGYF1O75420 1035 aaPredicted RBP4.44□□□□□ -1.7
RNF4-219ENST00000513450 LMOD1P29536 600 aaPredicted RBP4.44□□□□□ -1.7
RNF4-219ENST00000513450 ZNF697Q5TEC3 545 aa4.44□□□□□ -1.7
RNF4-219ENST00000513450 PLPP7Q8NBV4 271 aa4.44□□□□□ -1.7
RNF4-219ENST00000513450 MRGPRX2Q96LB1 330 aa4.44□□□□□ -1.7
RNF4-219ENST00000513450 KCTD15Q96SI1 283 aaPredicted RBP4.44□□□□□ -1.7
RNF4-219ENST00000513450 ACIN1Q9UKV3 1341 aaKnown RBP4.44□□□□□ -1.7
RNF4-219ENST00000513450 USP17L3A6NCW0 530 aa4.43□□□□□ -1.7
RNF4-219ENST00000513450 USP17L4A6NCW7 530 aa4.43□□□□□ -1.7
RNF4-219ENST00000513450 USP17L5A8MUK1 530 aa4.43□□□□□ -1.7
RNF4-219ENST00000513450 ADH1CP00326 375 aa4.43□□□□□ -1.7
RNF4-219ENST00000513450 RFX1P22670 979 aa4.43□□□□□ -1.7
RNF4-219ENST00000513450 SRPK2P78362 688 aaKnown RBP4.43□□□□□ -1.7
RNF4-219ENST00000513450 DHX9Q08211 1270 aaKnown RBP4.43□□□□□ -1.7
RNF4-219ENST00000513450 USP17L2Q6R6M4 530 aa4.43□□□□□ -1.7
RNF4-219ENST00000513450 USP17L1Q7RTZ2 530 aa4.43□□□□□ -1.7
RNF4-219ENST00000513450 VRTNQ9H8Y1 702 aa4.43□□□□□ -1.7
RNF4-219ENST00000513450 DOLKQ9UPQ8 538 aa4.43□□□□□ -1.7
RNF4-219ENST00000513450 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.42□□□□□ -1.7
RNF4-219ENST00000513450 POTECB2RU33 542 aa4.42□□□□□ -1.7
RNF4-219ENST00000513450 GRM5P41594 1212 aa4.42□□□□□ -1.7
RNF4-219ENST00000513450 NR5A1Q13285 461 aa4.42□□□□□ -1.7
RNF4-219ENST00000513450 NCOA4Q13772 614 aa4.42□□□□□ -1.7
RNF4-219ENST00000513450 ARID5BQ14865 1188 aa4.42□□□□□ -1.7
RNF4-219ENST00000513450 EML3Q32P44 896 aa4.42□□□□□ -1.7
RNF4-219ENST00000513450 INTS6LQ5JSJ4 861 aaKnown RBP4.42□□□□□ -1.7
RNF4-219ENST00000513450 KANK4Q5T7N3 995 aaPredicted RBP4.42□□□□□ -1.7
RNF4-219ENST00000513450 TREML4Q6UXN2 200 aa4.42□□□□□ -1.7
RNF4-219ENST00000513450 SIRT1Q96EB6 747 aa4.42□□□□□ -1.7
RNF4-219ENST00000513450 CCDC85AQ96PX6 553 aaPredicted RBP4.42□□□□□ -1.7
RNF4-219ENST00000513450 PKD2L1Q9P0L9 805 aa4.42□□□□□ -1.7
RNF4-219ENST00000513450 TLL2Q9Y6L7 1015 aa4.42□□□□□ -1.7
RNF4-219ENST00000513450 ATP5J2-PTCD1G3V325 749 aa4.41□□□□□ -1.7
RNF4-219ENST00000513450 ATG7O95352 703 aa4.41□□□□□ -1.7
RNF4-219ENST00000513450 FSHRP23945 695 aa4.41□□□□□ -1.7
RNF4-219ENST00000513450 MYT1Q01538 1121 aa4.41□□□□□ -1.7
RNF4-219ENST00000513450 PDE4CQ08493 712 aa4.41□□□□□ -1.7
RNF4-219ENST00000513450 USP4Q13107 963 aa4.41□□□□□ -1.7
RNF4-219ENST00000513450 TRIM50Q86XT4 487 aa4.41□□□□□ -1.7
RNF4-219ENST00000513450 SNIP1Q8TAD8 396 aaKnown RBP4.41□□□□□ -1.7
RNF4-219ENST00000513450 MKRN1Q9UHC7 482 aaKnown RBP4.41□□□□□ -1.7
RNF4-219ENST00000513450 ERVH48-1M5A8F1 160 aa4.4□□□□□ -1.71
RNF4-219ENST00000513450 GDF9O60383 454 aa4.4□□□□□ -1.71
RNF4-219ENST00000513450 ATP1A2P50993 1020 aa4.4□□□□□ -1.71
RNF4-219ENST00000513450 PRR20EP86478 221 aa4.4□□□□□ -1.71
RNF4-219ENST00000513450 PRR20CP86479 221 aa4.4□□□□□ -1.71
RNF4-219ENST00000513450 PRR20DP86480 221 aa4.4□□□□□ -1.71
RNF4-219ENST00000513450 PRR20BP86481 221 aa4.4□□□□□ -1.71
RNF4-219ENST00000513450 PRR20AP86496 221 aa4.4□□□□□ -1.71
RNF4-219ENST00000513450 FOXC1Q12948 553 aa4.4□□□□□ -1.71
RNF4-219ENST00000513450 TSGA10IPQ3SY00 556 aa4.4□□□□□ -1.71
RNF4-219ENST00000513450 OXLD1Q5BKU9 147 aa4.4□□□□□ -1.71
RNF4-219ENST00000513450 CCDC116Q8IYX3 515 aa4.4□□□□□ -1.71
RNF4-219ENST00000513450 DEPDC4Q8N2C3 294 aa4.4□□□□□ -1.71
RNF4-219ENST00000513450 NOD1Q9Y239 953 aa4.4□□□□□ -1.71
RNF4-219ENST00000513450 PCDHB11Q9Y5F2 797 aa4.4□□□□□ -1.71
RNF4-219ENST00000513450 FAM187AA6NFU0 413 aa4.39□□□□□ -1.71
RNF4-219ENST00000513450 FAM196BA6NMK8 535 aa4.39□□□□□ -1.71
RNF4-219ENST00000513450 DGAT1O75907 488 aa4.39□□□□□ -1.71
RNF4-219ENST00000513450 ALDH1A1P00352 501 aa4.39□□□□□ -1.71
RNF4-219ENST00000513450 MYCP01106 439 aaPredicted RBP4.39□□□□□ -1.71
RNF4-219ENST00000513450 RAB15P59190 212 aa4.39□□□□□ -1.71
RNF4-219ENST00000513450 ERVK-9P63128 1117 aa4.39□□□□□ -1.71
RNF4-219ENST00000513450 ELOAQ14241 798 aaKnown RBP4.39□□□□□ -1.71
RNF4-219ENST00000513450 LARP1Q6PKG0 1096 aaKnown RBP4.39□□□□□ -1.71
RNF4-219ENST00000513450 CYP4X1Q8N118 509 aa4.39□□□□□ -1.71
RNF4-219ENST00000513450 CDCA7Q9BWT1 371 aaPredicted RBP4.39□□□□□ -1.71
RNF4-219ENST00000513450 WASF2Q9Y6W5 498 aa4.39□□□□□ -1.71
RNF4-219ENST00000513450 TTC24A2A3L6 582 aaPredicted RBP4.38□□□□□ -1.71
RNF4-219ENST00000513450 CSB-PGBD3P0DP91 1061 aa4.38□□□□□ -1.71
RNF4-219ENST00000513450 RASA1P20936 1047 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms