RNA–Protein interactions for RNA: ENST00000512536.5

LINC00616-203, long intergenic non-protein coding RNA 616, humanhuman

TSL 4 BASIC

Gene LINC00616, Length 568 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00616-203ENST00000512536 KCNH2Q12809 1159 aa8.76□□□□□ -1.01
LINC00616-203ENST00000512536 PRPF38BQ5VTL8 546 aaKnown RBP8.76□□□□□ -1.01
LINC00616-203ENST00000512536 PTPRGP23470 1445 aa8.76□□□□□ -1.01
LINC00616-203ENST00000512536 KIF21BO75037 1637 aa8.76□□□□□ -1.01
LINC00616-203ENST00000512536 ADAMTSL3P82987 1691 aa8.75□□□□□ -1.01
LINC00616-203ENST00000512536 LILRB3O75022 631 aa8.75□□□□□ -1.01
LINC00616-203ENST00000512536 FBXO31Q5XUX0 539 aaPredicted RBP8.75□□□□□ -1.01
LINC00616-203ENST00000512536 UNC93B1Q9H1C4 597 aa8.75□□□□□ -1.01
LINC00616-203ENST00000512536 ZBTB3Q9H5J0 574 aa8.75□□□□□ -1.01
LINC00616-203ENST00000512536 TTC24A2A3L6 582 aaPredicted RBP8.74□□□□□ -1.01
LINC00616-203ENST00000512536 PER1O15534 1290 aaPredicted RBP8.74□□□□□ -1.01
LINC00616-203ENST00000512536 F12P00748 615 aaPredicted RBP8.74□□□□□ -1.01
LINC00616-203ENST00000512536 GPBP1L1Q9HC44 474 aaPredicted RBP8.74□□□□□ -1.01
LINC00616-203ENST00000512536 MAGI3Q5TCQ9 1506 aa8.74□□□□□ -1.01
LINC00616-203ENST00000512536 CSPP1Q1MSJ5 1256 aa8.73□□□□□ -1.01
LINC00616-203ENST00000512536 RTL5Q5HYW3 569 aaPredicted RBP8.73□□□□□ -1.01
LINC00616-203ENST00000512536 BAP1Q92560 729 aa8.73□□□□□ -1.01
LINC00616-203ENST00000512536 HPS1Q92902 700 aa8.73□□□□□ -1.01
LINC00616-203ENST00000512536 TNIKQ9UKE5 1360 aa8.72□□□□□ -1.01
LINC00616-203ENST00000512536 KDM5BQ9UGL1 1544 aa8.71□□□□□ -1.01
LINC00616-203ENST00000512536 CTC1Q2NKJ3 1217 aa8.71□□□□□ -1.02
LINC00616-203ENST00000512536 LINC01559Q495D7 138 aa8.71□□□□□ -1.02
LINC00616-203ENST00000512536 ZNF775Q96BV0 537 aaPredicted RBP8.71□□□□□ -1.02
LINC00616-203ENST00000512536 MAP10Q9P2G4 905 aa8.71□□□□□ -1.02
LINC00616-203ENST00000512536 PLEKHG3A1L390 1219 aa8.7□□□□□ -1.02
LINC00616-203ENST00000512536 ZNF511Q8NB15 262 aa8.7□□□□□ -1.02
LINC00616-203ENST00000512536 FAM117AQ9C073 453 aa8.7□□□□□ -1.02
LINC00616-203ENST00000512536 KDM4CQ9H3R0 1056 aa8.7□□□□□ -1.02
LINC00616-203ENST00000512536 CARMIL2Q6F5E8 1435 aa8.7□□□□□ -1.02
LINC00616-203ENST00000512536 CUL7Q14999 1698 aa8.69□□□□□ -1.02
LINC00616-203ENST00000512536 AXIN1O15169 862 aa8.69□□□□□ -1.02
LINC00616-203ENST00000512536 CLK2P49760 499 aaKnown RBP8.69□□□□□ -1.02
LINC00616-203ENST00000512536 POLR3EQ9NVU0 708 aa8.69□□□□□ -1.02
LINC00616-203ENST00000512536 UACAQ9BZF9 1416 aa8.69□□□□□ -1.02
LINC00616-203ENST00000512536 WDR7Q9Y4E6 1490 aa8.69□□□□□ -1.02
LINC00616-203ENST00000512536 EHBP1Q8NDI1 1231 aa8.68□□□□□ -1.02
LINC00616-203ENST00000512536 GMPR2Q9P2T1 348 aaKnown RBP8.68□□□□□ -1.02
LINC00616-203ENST00000512536 IQSEC2Q5JU85 1478 aa8.68□□□□□ -1.02
LINC00616-203ENST00000512536 MADDQ8WXG6 1647 aa8.68□□□□□ -1.02
LINC00616-203ENST00000512536 ALDH1A1P00352 501 aa8.67□□□□□ -1.02
LINC00616-203ENST00000512536 ARAP3Q8WWN8 1544 aa8.67□□□□□ -1.02
LINC00616-203ENST00000512536 BCORL1Q5H9F3 1711 aa8.66□□□□□ -1.02
LINC00616-203ENST00000512536 CFAP43Q8NDM7 1665 aa8.66□□□□□ -1.02
LINC00616-203ENST00000512536 BIVM-ERCC5R4GMW8 1640 aa8.66□□□□□ -1.02
LINC00616-203ENST00000512536 C4orf48Q5BLP8 95 aa8.66□□□□□ -1.02
LINC00616-203ENST00000512536 TLL2Q9Y6L7 1015 aa8.66□□□□□ -1.02
LINC00616-203ENST00000512536 CD109Q6YHK3 1445 aa8.65□□□□□ -1.02
LINC00616-203ENST00000512536 CTHP32929 405 aa8.65□□□□□ -1.02
LINC00616-203ENST00000512536 PROCA1Q8NCQ7 364 aaPredicted RBP8.65□□□□□ -1.02
LINC00616-203ENST00000512536 FOXJ1Q92949 421 aa8.65□□□□□ -1.02
LINC00616-203ENST00000512536 RSPH6AQ9H0K4 717 aa8.65□□□□□ -1.02
LINC00616-203ENST00000512536 NUTM2BA6NNL0 878 aaPredicted RBP8.64□□□□□ -1.03
LINC00616-203ENST00000512536 NUTM2EB1AL46 878 aaPredicted RBP8.64□□□□□ -1.03
LINC00616-203ENST00000512536 SH3D19Q5HYK7 790 aa8.64□□□□□ -1.03
LINC00616-203ENST00000512536 LCE2AQ5TA79 106 aaPredicted RBP8.64□□□□□ -1.03
LINC00616-203ENST00000512536 NUTM2DQ5VT03 806 aaPredicted RBP8.64□□□□□ -1.03
LINC00616-203ENST00000512536 NUTM2AQ8IVF1 878 aaPredicted RBP8.64□□□□□ -1.03
LINC00616-203ENST00000512536 MPNDQ8N594 471 aa8.64□□□□□ -1.03
LINC00616-203ENST00000512536 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.64□□□□□ -1.03
LINC00616-203ENST00000512536 ATP13A2Q9NQ11 1180 aa8.64□□□□□ -1.03
LINC00616-203ENST00000512536 ZCCHC11Q5TAX3 1644 aaKnown RBP8.64□□□□□ -1.03
LINC00616-203ENST00000512536 PHLDB1Q86UU1 1377 aa8.63□□□□□ -1.03
LINC00616-203ENST00000512536 HSPA2P54652 639 aa8.63□□□□□ -1.03
LINC00616-203ENST00000512536 SKIV2LQ15477 1246 aaKnown RBP8.63□□□□□ -1.03
LINC00616-203ENST00000512536 VARSP26640 1264 aaKnown RBP8.62□□□□□ -1.03
LINC00616-203ENST00000512536 CTDSPL2Q05D32 466 aa8.62□□□□□ -1.03
LINC00616-203ENST00000512536 YEATS2Q9ULM3 1422 aa8.61□□□□□ -1.03
LINC00616-203ENST00000512536 RIMS1Q86UR5 1692 aaKnown RBP8.6□□□□□ -1.03
LINC00616-203ENST00000512536 SNRPBP14678 240 aaKnown RBP8.6□□□□□ -1.03
LINC00616-203ENST00000512536 PPP2R2DQ66LE6 453 aa8.6□□□□□ -1.03
LINC00616-203ENST00000512536 SH3RF1Q7Z6J0 888 aa8.6□□□□□ -1.03
LINC00616-203ENST00000512536 TSC1Q92574 1164 aa8.6□□□□□ -1.03
LINC00616-203ENST00000512536 KLF16Q9BXK1 252 aaPredicted RBP8.6□□□□□ -1.03
LINC00616-203ENST00000512536 TRIM46Q7Z4K8 759 aa8.59□□□□□ -1.03
LINC00616-203ENST00000512536 DDRGK1Q96HY6 314 aa8.59□□□□□ -1.03
LINC00616-203ENST00000512536 CDK15Q96Q40 435 aa8.59□□□□□ -1.03
LINC00616-203ENST00000512536 ARHGEF40Q8TER5 1519 aa8.59□□□□□ -1.03
LINC00616-203ENST00000512536 SH3BP5LQ7L8J4 393 aa8.58□□□□□ -1.04
LINC00616-203ENST00000512536 LRRN4Q8WUT4 740 aa8.58□□□□□ -1.04
LINC00616-203ENST00000512536 TRIM47Q96LD4 638 aa8.58□□□□□ -1.04
LINC00616-203ENST00000512536 C1QTNF2Q9BXJ5 285 aa8.58□□□□□ -1.04
LINC00616-203ENST00000512536 IQGAP2Q13576 1575 aa8.57□□□□□ -1.04
LINC00616-203ENST00000512536 POGZQ7Z3K3 1410 aa8.57□□□□□ -1.04
LINC00616-203ENST00000512536 C11orf95C9JLR9 678 aaPredicted RBP8.57□□□□□ -1.04
LINC00616-203ENST00000512536 LCE2CQ5TA81 110 aa8.57□□□□□ -1.04
LINC00616-203ENST00000512536 HELBQ8NG08 1087 aaPredicted RBP8.57□□□□□ -1.04
LINC00616-203ENST00000512536 WASF2Q9Y6W5 498 aa8.57□□□□□ -1.04
LINC00616-203ENST00000512536 ARID4BQ4LE39 1312 aaPredicted RBP8.56□□□□□ -1.04
LINC00616-203ENST00000512536 PTPRTO14522 1441 aa8.56□□□□□ -1.04
LINC00616-203ENST00000512536 DISP1Q96F81 1524 aa8.56□□□□□ -1.04
LINC00616-203ENST00000512536 BMP1P13497 986 aa8.56□□□□□ -1.04
LINC00616-203ENST00000512536 GRM5P41594 1212 aa8.56□□□□□ -1.04
LINC00616-203ENST00000512536 NNTQ13423 1086 aa8.56□□□□□ -1.04
LINC00616-203ENST00000512536 FAM174AQ8TBP5 190 aa8.56□□□□□ -1.04
LINC00616-203ENST00000512536 TTBK1Q5TCY1 1321 aaPredicted RBP8.55□□□□□ -1.04
LINC00616-203ENST00000512536 NR3C2P08235 984 aa8.55□□□□□ -1.04
LINC00616-203ENST00000512536 FANCAO15360 1455 aa8.55□□□□□ -1.04
LINC00616-203ENST00000512536 NEO1Q92859 1461 aa8.55□□□□□ -1.04
LINC00616-203ENST00000512536 MED1Q15648 1581 aaPredicted RBP8.55□□□□□ -1.04
LINC00616-203ENST00000512536 TTC37Q6PGP7 1564 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 1313.1 ms