RNA–Protein interactions for RNA: ENST00000512078.5

DEPDC1B-205, Transcript of DEP domain containing 1B, humanhuman

TSL 2

Gene DEPDC1B, Length 1,596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-205ENST00000512078 NGDNQ8NEJ9 315 aaKnown RBP11.75□□□□□ -0.53
DEPDC1B-205ENST00000512078 NHSQ6T4R5 1651 aa11.74□□□□□ -0.53
DEPDC1B-205ENST00000512078 CAPN15O75808 1086 aa11.74□□□□□ -0.53
DEPDC1B-205ENST00000512078 DDB1Q16531 1140 aa11.74□□□□□ -0.53
DEPDC1B-205ENST00000512078 C14orf93Q9H972 538 aaKnown RBP11.73□□□□□ -0.53
DEPDC1B-205ENST00000512078 TUBGCP6Q96RT7 1819 aa11.73□□□□□ -0.53
DEPDC1B-205ENST00000512078 YBX3P16989 372 aaKnown RBP eCLIP11.72□□□□□ -0.536e-6■□□□□ 10.9
DEPDC1B-205ENST00000512078 COL13A1Q5TAT6 717 aaPredicted RBP11.72□□□□□ -0.53
DEPDC1B-205ENST00000512078 KLHL34Q8N239 644 aa11.72□□□□□ -0.53
DEPDC1B-205ENST00000512078 NLGN2Q8NFZ4 835 aa11.72□□□□□ -0.53
DEPDC1B-205ENST00000512078 WDR90Q96KV7 1748 aa11.72□□□□□ -0.53
DEPDC1B-205ENST00000512078 ITGAEP38570 1179 aa11.71□□□□□ -0.53
DEPDC1B-205ENST00000512078 APLP1P51693 650 aa11.71□□□□□ -0.53
DEPDC1B-205ENST00000512078 DNAJC5GQ8N7S2 189 aa11.71□□□□□ -0.53
DEPDC1B-205ENST00000512078 LOC105371045A0A1W2PR82 267 aa11.71□□□□□ -0.54
DEPDC1B-205ENST00000512078 POLD1P28340 1107 aa11.71□□□□□ -0.54
DEPDC1B-205ENST00000512078 RGL3Q3MIN7 710 aa11.71□□□□□ -0.54
DEPDC1B-205ENST00000512078 MARCH10Q8NA82 808 aaPredicted RBP11.71□□□□□ -0.54
DEPDC1B-205ENST00000512078 SLC16A10Q8TF71 515 aa11.71□□□□□ -0.54
DEPDC1B-205ENST00000512078 POGKQ9P215 609 aa11.71□□□□□ -0.54
DEPDC1B-205ENST00000512078 BTAF1O14981 1849 aa11.7□□□□□ -0.54
DEPDC1B-205ENST00000512078 USP19O94966 1318 aa11.7□□□□□ -0.54
DEPDC1B-205ENST00000512078 ARHGEF28Q8N1W1 1705 aaKnown RBP11.69□□□□□ -0.54
DEPDC1B-205ENST00000512078 NUTM2GQ5VZR2 741 aa11.69□□□□□ -0.54
DEPDC1B-205ENST00000512078 COL18A1P39060 1754 aa11.68□□□□□ -0.54
DEPDC1B-205ENST00000512078 WASLO00401 505 aaPredicted RBP11.68□□□□□ -0.54
DEPDC1B-205ENST00000512078 ZNF827Q17R98 1081 aa11.68□□□□□ -0.54
DEPDC1B-205ENST00000512078 TNS4Q8IZW8 715 aa11.68□□□□□ -0.54
DEPDC1B-205ENST00000512078 HIRIP3Q9BW71 556 aaPredicted RBP11.68□□□□□ -0.54
DEPDC1B-205ENST00000512078 KAT6BQ8WYB5 2073 aa11.68□□□□□ -0.54
DEPDC1B-205ENST00000512078 KIF3CO14782 793 aa11.67□□□□□ -0.54
DEPDC1B-205ENST00000512078 CFAP70Q5T0N1 1121 aa11.67□□□□□ -0.54
DEPDC1B-205ENST00000512078 ADGRB1O14514 1584 aa11.67□□□□□ -0.54
DEPDC1B-205ENST00000512078 ZNF526Q8TF50 670 aaPredicted RBP11.67□□□□□ -0.54
DEPDC1B-205ENST00000512078 CDCA7Q9BWT1 371 aaPredicted RBP11.67□□□□□ -0.54
DEPDC1B-205ENST00000512078 SLC4A1APQ9BWU0 796 aaKnown RBP11.67□□□□□ -0.54
DEPDC1B-205ENST00000512078 POLR3AO14802 1390 aaPredicted RBP11.67□□□□□ -0.54
DEPDC1B-205ENST00000512078 MINK1Q8N4C8 1332 aaPredicted RBP11.66□□□□□ -0.54
DEPDC1B-205ENST00000512078 RGPD5Q99666 1765 aa11.65□□□□□ -0.54
DEPDC1B-205ENST00000512078 JMYQ8N9B5 988 aa11.64□□□□□ -0.55
DEPDC1B-205ENST00000512078 TRPM1Q7Z4N2 1603 aa11.64□□□□□ -0.55
DEPDC1B-205ENST00000512078 GCP02774 474 aa11.63□□□□□ -0.55
DEPDC1B-205ENST00000512078 TOM1L2Q6ZVM7 507 aa11.63□□□□□ -0.55
DEPDC1B-205ENST00000512078 ABTB2Q8N961 1025 aa11.63□□□□□ -0.55
DEPDC1B-205ENST00000512078 AKT1S1Q96B36 256 aa11.63□□□□□ -0.55
DEPDC1B-205ENST00000512078 PCDH10Q9P2E7 1040 aa11.63□□□□□ -0.55
DEPDC1B-205ENST00000512078 PNPLA7Q6ZV29 1317 aa11.63□□□□□ -0.55
DEPDC1B-205ENST00000512078 BRD4O60885 1362 aaPredicted RBP11.63□□□□□ -0.55
DEPDC1B-205ENST00000512078 TNS2Q63HR2 1409 aa11.63□□□□□ -0.55
DEPDC1B-205ENST00000512078 WDR17Q8IZU2 1322 aa11.62□□□□□ -0.55
DEPDC1B-205ENST00000512078 SLIT3O75094 1523 aa11.62□□□□□ -0.55
DEPDC1B-205ENST00000512078 ABCC6O95255 1503 aa11.62□□□□□ -0.55
DEPDC1B-205ENST00000512078 NUDT16Q96DE0 195 aaKnown RBP11.62□□□□□ -0.55
DEPDC1B-205ENST00000512078 KLRG1Q96E93 195 aa11.62□□□□□ -0.55
DEPDC1B-205ENST00000512078 NLRP13Q86W25 1043 aa11.61□□□□□ -0.55
DEPDC1B-205ENST00000512078 LRRC4BQ9NT99 713 aa11.61□□□□□ -0.55
DEPDC1B-205ENST00000512078 ACEP12821 1306 aa11.61□□□□□ -0.55
DEPDC1B-205ENST00000512078 PIK3C2AO00443 1686 aa11.6□□□□□ -0.55
DEPDC1B-205ENST00000512078 TOMM70O94826 608 aa11.6□□□□□ -0.55
DEPDC1B-205ENST00000512078 TRAK1Q9UPV9 953 aa11.6□□□□□ -0.55
DEPDC1B-205ENST00000512078 USP6P35125 1406 aa11.6□□□□□ -0.55
DEPDC1B-205ENST00000512078 EXOC5O00471 708 aa11.59□□□□□ -0.55
DEPDC1B-205ENST00000512078 LY75O60449 1722 aa11.59□□□□□ -0.55
DEPDC1B-205ENST00000512078 CICQ96RK0 1608 aaPredicted RBP11.59□□□□□ -0.55
DEPDC1B-205ENST00000512078 ACSBG1Q96GR2 724 aa11.58□□□□□ -0.56
DEPDC1B-205ENST00000512078 PCNTO95613 3336 aa11.57□□□□□ -0.56
DEPDC1B-205ENST00000512078 PLEKHG3A1L390 1219 aa11.57□□□□□ -0.56
DEPDC1B-205ENST00000512078 ZBTB7CA1YPR0 619 aa11.57□□□□□ -0.56
DEPDC1B-205ENST00000512078 SLC27A3Q5K4L6 730 aa11.57□□□□□ -0.56
DEPDC1B-205ENST00000512078 CARD10Q9BWT7 1032 aa11.57□□□□□ -0.56
DEPDC1B-205ENST00000512078 CCDC7Q96M83 1385 aa11.56□□□□□ -0.56
DEPDC1B-205ENST00000512078 WWC3Q9ULE0 1092 aa11.56□□□□□ -0.56
DEPDC1B-205ENST00000512078 CD2APQ9Y5K6 639 aa11.56□□□□□ -0.56
DEPDC1B-205ENST00000512078 CPSF1Q10570 1443 aaKnown RBP11.55□□□□□ -0.56
DEPDC1B-205ENST00000512078 PPIP5K1Q6PFW1 1433 aa11.55□□□□□ -0.56
DEPDC1B-205ENST00000512078 TFCP2L1Q9NZI6 479 aa11.55□□□□□ -0.56
DEPDC1B-205ENST00000512078 AXIN2Q9Y2T1 843 aa11.55□□□□□ -0.56
DEPDC1B-205ENST00000512078 CCDC61Q9Y6R9 512 aa11.55□□□□□ -0.56
DEPDC1B-205ENST00000512078 HTRA3P83110 453 aa11.53□□□□□ -0.56
DEPDC1B-205ENST00000512078 RBM46Q8TBY0 533 aaKnown RBP11.53□□□□□ -0.56
DEPDC1B-205ENST00000512078 CDK19Q9BWU1 502 aa11.53□□□□□ -0.56
DEPDC1B-205ENST00000512078 QRICH2Q9H0J4 1663 aa11.52□□□□□ -0.56
DEPDC1B-205ENST00000512078 CSB-PGBD3P0DP91 1061 aa11.5□□□□□ -0.57
DEPDC1B-205ENST00000512078 USP54Q70EL1 1684 aa11.5□□□□□ -0.57
DEPDC1B-205ENST00000512078 IGSF1Q8N6C5 1336 aa11.5□□□□□ -0.57
DEPDC1B-205ENST00000512078 NLRP6P59044 892 aa11.5□□□□□ -0.57
DEPDC1B-205ENST00000512078 ARHGEF25Q86VW2 580 aa11.5□□□□□ -0.57
DEPDC1B-205ENST00000512078 COL23A1Q86Y22 540 aaPredicted RBP11.5□□□□□ -0.57
DEPDC1B-205ENST00000512078 DOT1LQ8TEK3 1739 aa11.49□□□□□ -0.57
DEPDC1B-205ENST00000512078 HSPA1AP0DMV8 641 aaKnown RBP11.49□□□□□ -0.57
DEPDC1B-205ENST00000512078 HSPA1BP0DMV9 641 aaKnown RBP11.49□□□□□ -0.57
DEPDC1B-205ENST00000512078 FSTL1Q12841 308 aa11.49□□□□□ -0.57
DEPDC1B-205ENST00000512078 TAF1LQ8IZX4 1826 aa11.49□□□□□ -0.57
DEPDC1B-205ENST00000512078 C5P01031 1676 aa11.49□□□□□ -0.57
DEPDC1B-205ENST00000512078 MSL1Q68DK7 614 aa11.48□□□□□ -0.57
DEPDC1B-205ENST00000512078 NMRK2Q9NPI5 230 aa11.48□□□□□ -0.57
DEPDC1B-205ENST00000512078 NFAT5O94916 1531 aa11.47□□□□□ -0.57
DEPDC1B-205ENST00000512078 MPHOSPH9Q99550 1183 aa11.47□□□□□ -0.57
DEPDC1B-205ENST00000512078 PKD1L3Q7Z443 1732 aa11.47□□□□□ -0.57
DEPDC1B-205ENST00000512078 KIAA1551Q9HCM1 1747 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms