RNA–Protein interactions for RNA: ENST00000511214.1

SNF8-210, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-210ENST00000511214 LRRC7Q96NW7 1537 aa11.35□□□□□ -0.59
SNF8-210ENST00000511214 HSP90AB1P08238 724 aaKnown RBP11.35□□□□□ -0.59
SNF8-210ENST00000511214 SRPK2P78362 688 aaKnown RBP11.35□□□□□ -0.59
SNF8-210ENST00000511214 TMEM131LA2VDJ0 1609 aa11.35□□□□□ -0.59
SNF8-210ENST00000511214 YEATS2Q9ULM3 1422 aa11.35□□□□□ -0.59
SNF8-210ENST00000511214 ABCC4O15439 1325 aa11.35□□□□□ -0.59
SNF8-210ENST00000511214 ZBTB7BO15156 539 aaPredicted RBP11.34□□□□□ -0.59
SNF8-210ENST00000511214 NPM1P06748 294 aaKnown RBP eCLIP11.34□□□□□ -0.59
SNF8-210ENST00000511214 GNAI1P63096 354 aa11.34□□□□□ -0.59
SNF8-210ENST00000511214 LMOD3Q0VAK6 560 aa11.34□□□□□ -0.59
SNF8-210ENST00000511214 NFE2L2Q16236 605 aa11.34□□□□□ -0.59
SNF8-210ENST00000511214 MRPL50Q8N5N7 158 aaKnown RBP11.34□□□□□ -0.59
SNF8-210ENST00000511214 GGNBP2Q9H3C7 697 aa11.34□□□□□ -0.59
SNF8-210ENST00000511214 IFT57Q9NWB7 429 aa11.34□□□□□ -0.59
SNF8-210ENST00000511214 K7ELQ4 463 aaPredicted RBP11.33□□□□□ -0.6
SNF8-210ENST00000511214 TNPO1Q92973 898 aaKnown RBP11.33□□□□□ -0.6
SNF8-210ENST00000511214 API5Q9BZZ5 524 aaKnown RBP11.33□□□□□ -0.6
SNF8-210ENST00000511214 AATKQ6ZMQ8 1374 aa11.32□□□□□ -0.6
SNF8-210ENST00000511214 GOLGA6L22H0YM25 854 aa11.32□□□□□ -0.6
SNF8-210ENST00000511214 VAMP4O75379 141 aa11.32□□□□□ -0.6
SNF8-210ENST00000511214 CDC45O75419 566 aa11.32□□□□□ -0.6
SNF8-210ENST00000511214 ZNF853P0CG23 659 aa11.32□□□□□ -0.6
SNF8-210ENST00000511214 HAP1P54257 671 aaPredicted RBP11.32□□□□□ -0.6
SNF8-210ENST00000511214 CACNB1Q02641 598 aaPredicted RBP11.32□□□□□ -0.6
SNF8-210ENST00000511214 IDI1Q13907 227 aa11.32□□□□□ -0.6
SNF8-210ENST00000511214 KIF2CQ99661 725 aa11.32□□□□□ -0.6
SNF8-210ENST00000511214 LNPKQ9C0E8 428 aa11.32□□□□□ -0.6
SNF8-210ENST00000511214 PREX1Q8TCU6 1659 aa11.32□□□□□ -0.6
SNF8-210ENST00000511214 CDK12Q9NYV4 1490 aaPredicted RBP11.32□□□□□ -0.6
SNF8-210ENST00000511214 C1QBPQ07021 282 aaKnown RBP11.31□□□□□ -0.6
SNF8-210ENST00000511214 SPRYD3Q8NCJ5 442 aa11.31□□□□□ -0.6
SNF8-210ENST00000511214 ALKQ9UM73 1620 aa11.31□□□□□ -0.6
SNF8-210ENST00000511214 CPSF1Q10570 1443 aaKnown RBP11.3□□□□□ -0.6
SNF8-210ENST00000511214 RABEP1Q15276 862 aa11.3□□□□□ -0.6
SNF8-210ENST00000511214 ESPNB1AK53 854 aa11.29□□□□□ -0.6
SNF8-210ENST00000511214 PRKAR2BP31323 418 aa11.29□□□□□ -0.6
SNF8-210ENST00000511214 CCDC173Q0VFZ6 552 aa11.29□□□□□ -0.6
SNF8-210ENST00000511214 ANKRD45Q5TZF3 282 aa11.29□□□□□ -0.6
SNF8-210ENST00000511214 TBC1D9Q6ZT07 1266 aa11.29□□□□□ -0.6
SNF8-210ENST00000511214 PRAM1Q96QH2 718 aa11.29□□□□□ -0.6
SNF8-210ENST00000511214 PANK2Q9BZ23 570 aa11.29□□□□□ -0.6
SNF8-210ENST00000511214 GZF1Q9H116 711 aaPredicted RBP11.29□□□□□ -0.6
SNF8-210ENST00000511214 CFAP65Q6ZU64 1925 aaKnown RBP11.29□□□□□ -0.6
SNF8-210ENST00000511214 EDC4Q6P2E9 1401 aaKnown RBP11.28□□□□□ -0.6
SNF8-210ENST00000511214 NUCB2P80303 420 aa11.28□□□□□ -0.6
SNF8-210ENST00000511214 KLHL40Q2TBA0 621 aa11.28□□□□□ -0.6
SNF8-210ENST00000511214 TRIM44Q96DX7 344 aaPredicted RBP11.28□□□□□ -0.6
SNF8-210ENST00000511214 PPP1R9BQ96SB3 815 aa11.28□□□□□ -0.6
SNF8-210ENST00000511214 CDK19Q9BWU1 502 aa11.28□□□□□ -0.6
SNF8-210ENST00000511214 POLKQ9UBT6 870 aa11.28□□□□□ -0.6
SNF8-210ENST00000511214 RICTORQ6R327 1708 aa11.28□□□□□ -0.6
SNF8-210ENST00000511214 HSP90AA1P07900 732 aaKnown RBP11.27□□□□□ -0.61
SNF8-210ENST00000511214 GLIPR1L2Q4G1C9 344 aa11.27□□□□□ -0.61
SNF8-210ENST00000511214 SAMD1Q6SPF0 538 aaPredicted RBP11.27□□□□□ -0.61
SNF8-210ENST00000511214 CWC22Q9HCG8 908 aaKnown RBP11.27□□□□□ -0.61
SNF8-210ENST00000511214 MINK1Q8N4C8 1332 aaPredicted RBP11.27□□□□□ -0.61
SNF8-210ENST00000511214 RRP9O43818 475 aaKnown RBP11.26□□□□□ -0.61
SNF8-210ENST00000511214 TPM2P07951 284 aa11.26□□□□□ -0.61
SNF8-210ENST00000511214 IL13P35225 146 aa11.26□□□□□ -0.61
SNF8-210ENST00000511214 HS1BP3Q53T59 392 aa11.26□□□□□ -0.61
SNF8-210ENST00000511214 DCTPP1Q9H773 170 aa11.26□□□□□ -0.61
SNF8-210ENST00000511214 TERF1P54274 439 aa11.25□□□□□ -0.61
SNF8-210ENST00000511214 ZNF445P59923 1031 aa11.25□□□□□ -0.61
SNF8-210ENST00000511214 TWISTNBQ3B726 338 aaPredicted RBP11.25□□□□□ -0.61
SNF8-210ENST00000511214 INTS3Q68E01 1043 aaKnown RBP11.25□□□□□ -0.61
SNF8-210ENST00000511214 SIRT2Q8IXJ6 389 aa11.25□□□□□ -0.61
SNF8-210ENST00000511214 RPAP2Q8IXW5 612 aaPredicted RBP11.25□□□□□ -0.61
SNF8-210ENST00000511214 ANP32BQ92688 251 aaKnown RBP11.25□□□□□ -0.61
SNF8-210ENST00000511214 NAP1L5Q96NT1 182 aaPredicted RBP11.25□□□□□ -0.61
SNF8-210ENST00000511214 CABP1Q9NZU7 370 aa11.25□□□□□ -0.61
SNF8-210ENST00000511214 STK26Q9P289 416 aa11.25□□□□□ -0.61
SNF8-210ENST00000511214 MYO5BQ9ULV0 1848 aa11.25□□□□□ -0.61
SNF8-210ENST00000511214 BAG4O95429 457 aaKnown RBP11.24□□□□□ -0.61
SNF8-210ENST00000511214 CYP2E1P05181 493 aaPredicted RBP11.24□□□□□ -0.61
SNF8-210ENST00000511214 SAFB2Q14151 953 aaKnown RBP eCLIP11.24□□□□□ -0.61
SNF8-210ENST00000511214 TTC22Q5TAA0 569 aa11.24□□□□□ -0.61
SNF8-210ENST00000511214 CASC1Q6TDU7 716 aa11.24□□□□□ -0.61
SNF8-210ENST00000511214 PLEKHM2Q8IWE5 1019 aa11.24□□□□□ -0.61
SNF8-210ENST00000511214 SIRT1Q96EB6 747 aa11.24□□□□□ -0.61
SNF8-210ENST00000511214 MBIPQ9NS73 344 aa11.24□□□□□ -0.61
SNF8-210ENST00000511214 RIMS2Q9UQ26 1411 aa11.24□□□□□ -0.61
SNF8-210ENST00000511214 NUTM2DQ5VT03 806 aaPredicted RBP11.23□□□□□ -0.61
SNF8-210ENST00000511214 GAS2L3Q86XJ1 694 aa11.23□□□□□ -0.61
SNF8-210ENST00000511214 ANKRD44Q8N8A2 993 aa11.23□□□□□ -0.61
SNF8-210ENST00000511214 GAS2L2Q8NHY3 880 aa11.23□□□□□ -0.61
SNF8-210ENST00000511214 KIAA0232Q92628 1395 aa11.23□□□□□ -0.61
SNF8-210ENST00000511214 NRKQ7Z2Y5 1582 aa11.23□□□□□ -0.61
SNF8-210ENST00000511214 SETD1AO15047 1707 aaKnown RBP11.23□□□□□ -0.61
SNF8-210ENST00000511214 PTPRCP08575 1304 aa11.22□□□□□ -0.61
SNF8-210ENST00000511214 ATXN8OSP0DMR3 200 aa11.22□□□□□ -0.61
SNF8-210ENST00000511214 AGLP35573 1532 aa11.22□□□□□ -0.61
SNF8-210ENST00000511214 NASPP49321 788 aaPredicted RBP11.22□□□□□ -0.61
SNF8-210ENST00000511214 OSCARQ8IYS5 282 aa11.22□□□□□ -0.61
SNF8-210ENST00000511214 PHACTR3Q96KR7 559 aa11.22□□□□□ -0.61
SNF8-210ENST00000511214 USP26Q9BXU7 913 aa11.22□□□□□ -0.61
SNF8-210ENST00000511214 MON2Q7Z3U7 1717 aa11.21□□□□□ -0.61
SNF8-210ENST00000511214 RIMBP3CA6NJZ7 1639 aa11.21□□□□□ -0.61
SNF8-210ENST00000511214 RIMBP3BA6NNM3 1639 aa11.21□□□□□ -0.61
SNF8-210ENST00000511214 RIMBP3Q9UFD9 1639 aa11.21□□□□□ -0.61
SNF8-210ENST00000511214 ATP10DQ9P241 1426 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms