RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 ZNF692Q9BU19 519 aaPredicted RBP22.66■■□□□ 1.22
CCHCR1-228ENST00000509552 ZRANB1Q9UGI0 708 aa22.65■■□□□ 1.22
CCHCR1-228ENST00000509552 VAMP4O75379 141 aa22.64■■□□□ 1.22
CCHCR1-228ENST00000509552 ARHGAP45Q92619 1136 aa22.64■■□□□ 1.22
CCHCR1-228ENST00000509552 THUMPD2Q9BTF0 503 aaKnown RBP22.64■■□□□ 1.21
CCHCR1-228ENST00000509552 MON2Q7Z3U7 1717 aa22.63■■□□□ 1.21
CCHCR1-228ENST00000509552 MRPL50Q8N5N7 158 aaKnown RBP22.63■■□□□ 1.21
CCHCR1-228ENST00000509552 CPS1P31327 1500 aa22.63■■□□□ 1.21
CCHCR1-228ENST00000509552 TNRQ92752 1358 aa22.62■■□□□ 1.21
CCHCR1-228ENST00000509552 NCKAP5LQ9HCH0 1330 aa22.62■■□□□ 1.21
CCHCR1-228ENST00000509552 ZNF853P0CG23 659 aa22.62■■□□□ 1.21
CCHCR1-228ENST00000509552 RRS1Q15050 365 aaKnown RBP22.62■■□□□ 1.21
CCHCR1-228ENST00000509552 MBIPQ9NS73 344 aa22.61■■□□□ 1.21
CCHCR1-228ENST00000509552 NUCB1Q02818 461 aa22.6■■□□□ 1.21
CCHCR1-228ENST00000509552 CFAP44Q96MT7 982 aa22.59■■□□□ 1.21
CCHCR1-228ENST00000509552 C22orf23Q9BZE7 217 aa22.59■■□□□ 1.21
CCHCR1-228ENST00000509552 SLKQ9H2G2 1235 aaPredicted RBP22.59■■□□□ 1.21
CCHCR1-228ENST00000509552 ITSN1Q15811 1721 aa22.59■■□□□ 1.21
CCHCR1-228ENST00000509552 PTCH1Q13635 1447 aa22.59■■□□□ 1.21
CCHCR1-228ENST00000509552 TSPYL6Q8N831 410 aa22.59■■□□□ 1.21
CCHCR1-228ENST00000509552 TBC1D2Q9BYX2 928 aa22.59■■□□□ 1.21
CCHCR1-228ENST00000509552 AKAP12Q02952 1782 aa22.59■■□□□ 1.21
CCHCR1-228ENST00000509552 TMEM2Q9UHN6 1383 aa22.58■■□□□ 1.21
CCHCR1-228ENST00000509552 MFAP1P55081 439 aaKnown RBP22.58■■□□□ 1.21
CCHCR1-228ENST00000509552 TWISTNBQ3B726 338 aaPredicted RBP22.58■■□□□ 1.21
CCHCR1-228ENST00000509552 C3P01024 1663 aa22.58■■□□□ 1.21
CCHCR1-228ENST00000509552 PIK3R4Q99570 1358 aa22.58■■□□□ 1.2
CCHCR1-228ENST00000509552 ZBTB7BO15156 539 aaPredicted RBP22.58■■□□□ 1.2
CCHCR1-228ENST00000509552 ELL2O00472 640 aaPredicted RBP22.57■■□□□ 1.2
CCHCR1-228ENST00000509552 CHD1LQ86WJ1 897 aa22.57■■□□□ 1.2
CCHCR1-228ENST00000509552 PRR36Q9H6K5 1346 aa22.56■■□□□ 1.2
CCHCR1-228ENST00000509552 GCC1Q96CN9 775 aa22.56■■□□□ 1.2
CCHCR1-228ENST00000509552 LNPKQ9C0E8 428 aa22.55■■□□□ 1.2
CCHCR1-228ENST00000509552 ROBO2Q9HCK4 1378 aa22.54■■□□□ 1.2
CCHCR1-228ENST00000509552 API5Q9BZZ5 524 aaKnown RBP22.54■■□□□ 1.2
CCHCR1-228ENST00000509552 ANTXR1Q9H6X2 564 aa22.54■■□□□ 1.2
CCHCR1-228ENST00000509552 ABCC4O15439 1325 aa22.54■■□□□ 1.2
CCHCR1-228ENST00000509552 DLG5Q8TDM6 1919 aa22.53■■□□□ 1.2
CCHCR1-228ENST00000509552 UBR1Q8IWV7 1749 aa22.52■■□□□ 1.2
CCHCR1-228ENST00000509552 C8orf58Q8NAV2 365 aa22.52■■□□□ 1.2
CCHCR1-228ENST00000509552 TTC21BQ7Z4L5 1316 aa22.52■■□□□ 1.2
CCHCR1-228ENST00000509552 FAM83GA6ND36 823 aa22.51■■□□□ 1.19
CCHCR1-228ENST00000509552 ANKRD45Q5TZF3 282 aa22.51■■□□□ 1.19
CCHCR1-228ENST00000509552 KIF13AQ9H1H9 1805 aa22.5■■□□□ 1.19
CCHCR1-228ENST00000509552 ADAMTS13Q76LX8 1427 aa22.5■■□□□ 1.19
CCHCR1-228ENST00000509552 HAP1P54257 671 aaPredicted RBP22.5■■□□□ 1.19
CCHCR1-228ENST00000509552 ACEP12821 1306 aa22.5■■□□□ 1.19
CCHCR1-228ENST00000509552 EIF4A2Q14240 407 aaKnown RBP22.49■■□□□ 1.19
CCHCR1-228ENST00000509552 C1orf115Q9H7X2 142 aa22.49■■□□□ 1.19
CCHCR1-228ENST00000509552 NRKQ7Z2Y5 1582 aa22.49■■□□□ 1.19
CCHCR1-228ENST00000509552 SULT6B1Q6IMI4 303 aa22.49■■□□□ 1.19
CCHCR1-228ENST00000509552 PLEKHG3A1L390 1219 aa22.48■■□□□ 1.19
CCHCR1-228ENST00000509552 DCTN1Q14203 1278 aa22.48■■□□□ 1.19
CCHCR1-228ENST00000509552 BMP2KLQ5H9B9 411 aa22.48■■□□□ 1.19
CCHCR1-228ENST00000509552 PLEKHG1Q9ULL1 1385 aa22.48■■□□□ 1.19
CCHCR1-228ENST00000509552 KIF24Q5T7B8 1368 aa22.47■■□□□ 1.19
CCHCR1-228ENST00000509552 OVOS2A0A0J9YW53 1432 aa22.46■■□□□ 1.19
CCHCR1-228ENST00000509552 OVOS2Q6IE36 1432 aa22.46■■□□□ 1.19
CCHCR1-228ENST00000509552 AEBP1Q8IUX7 1158 aa22.46■■□□□ 1.19
CCHCR1-228ENST00000509552 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.45■■□□□ 1.18
CCHCR1-228ENST00000509552 HSCBQ8IWL3 235 aa22.45■■□□□ 1.18
CCHCR1-228ENST00000509552 USP6P35125 1406 aa22.45■■□□□ 1.18
CCHCR1-228ENST00000509552 TOPAZ1Q8N9V7 1692 aa22.44■■□□□ 1.18
CCHCR1-228ENST00000509552 NUTM2FA1L443 756 aa22.44■■□□□ 1.18
CCHCR1-228ENST00000509552 RBM25P49756 843 aaKnown RBP22.44■■□□□ 1.18
CCHCR1-228ENST00000509552 LTKP29376 864 aa22.43■■□□□ 1.18
CCHCR1-228ENST00000509552 SPRYD3Q8NCJ5 442 aa22.43■■□□□ 1.18
CCHCR1-228ENST00000509552 IL27Q8NEV9 243 aa22.43■■□□□ 1.18
CCHCR1-228ENST00000509552 SIRT2Q8IXJ6 389 aa22.43■■□□□ 1.18
CCHCR1-228ENST00000509552 EID1Q9Y6B2 187 aa22.42■■□□□ 1.18
CCHCR1-228ENST00000509552 CHMP5Q9NZZ3 219 aa22.41■■□□□ 1.18
CCHCR1-228ENST00000509552 CHL1O00533 1208 aa22.41■■□□□ 1.18
CCHCR1-228ENST00000509552 HSP90AB2PQ58FF8 381 aa22.4■■□□□ 1.18
CCHCR1-228ENST00000509552 USP31Q70CQ4 1352 aa22.4■■□□□ 1.18
CCHCR1-228ENST00000509552 INTS3Q68E01 1043 aaKnown RBP22.4■■□□□ 1.18
CCHCR1-228ENST00000509552 KIAA0232Q92628 1395 aa22.39■■□□□ 1.18
CCHCR1-228ENST00000509552 MCM10Q7L590 875 aa22.39■■□□□ 1.17
CCHCR1-228ENST00000509552 SLC26A8Q96RN1 970 aa22.39■■□□□ 1.17
CCHCR1-228ENST00000509552 NALCNQ8IZF0 1738 aa22.38■■□□□ 1.17
CCHCR1-228ENST00000509552 TTC21AQ8NDW8 1320 aa22.38■■□□□ 1.17
CCHCR1-228ENST00000509552 SNX21Q969T3 373 aa22.37■■□□□ 1.17
CCHCR1-228ENST00000509552 BRPF3Q9ULD4 1205 aa22.36■■□□□ 1.17
CCHCR1-228ENST00000509552 PTPRUQ92729 1446 aa22.36■■□□□ 1.17
CCHCR1-228ENST00000509552 SOX12O15370 315 aa22.36■■□□□ 1.17
CCHCR1-228ENST00000509552 AMOTL2Q9Y2J4 779 aa22.36■■□□□ 1.17
CCHCR1-228ENST00000509552 PEAK1Q9H792 1746 aa22.35■■□□□ 1.17
CCHCR1-228ENST00000509552 ARHGEF10O15013 1369 aa22.35■■□□□ 1.17
CCHCR1-228ENST00000509552 PTPRCP08575 1304 aa22.35■■□□□ 1.17
CCHCR1-228ENST00000509552 EIF5BO60841 1220 aaKnown RBP22.35■■□□□ 1.17
CCHCR1-228ENST00000509552 SSH2Q76I76 1423 aa22.35■■□□□ 1.17
CCHCR1-228ENST00000509552 DCTPP1Q9H773 170 aa22.35■■□□□ 1.17
CCHCR1-228ENST00000509552 RGPD1P0DJD0 1748 aa22.34■■□□□ 1.17
CCHCR1-228ENST00000509552 KRT24Q2M2I5 525 aa22.34■■□□□ 1.17
CCHCR1-228ENST00000509552 TBC1D9Q6ZT07 1266 aa22.34■■□□□ 1.17
CCHCR1-228ENST00000509552 MCM4P33991 863 aa22.34■■□□□ 1.17
CCHCR1-228ENST00000509552 RPAP2Q8IXW5 612 aaPredicted RBP22.33■■□□□ 1.17
CCHCR1-228ENST00000509552 RTF1Q92541 710 aaKnown RBP22.33■■□□□ 1.17
CCHCR1-228ENST00000509552 CDC45O75419 566 aa22.32■■□□□ 1.16
CCHCR1-228ENST00000509552 CEBPAP49715 358 aaPredicted RBP22.32■■□□□ 1.16
CCHCR1-228ENST00000509552 TBX22Q9Y458 520 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms