RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 ZNF692Q9BU19 519 aaPredicted RBP18.5■□□□□ 0.55
DDX41-208ENST00000507955 PLEKHG1Q9ULL1 1385 aa18.5■□□□□ 0.55
DDX41-208ENST00000507955 CT47B1P0C2W7 299 aaPredicted RBP18.49■□□□□ 0.55
DDX41-208ENST00000507955 RBM33Q96EV2 1170 aaKnown RBP18.49■□□□□ 0.55
DDX41-208ENST00000507955 MBIPQ9NS73 344 aa18.49■□□□□ 0.55
DDX41-208ENST00000507955 EIF4A2Q14240 407 aaKnown RBP18.49■□□□□ 0.55
DDX41-208ENST00000507955 SULT6B1Q6IMI4 303 aa18.49■□□□□ 0.55
DDX41-208ENST00000507955 DDRGK1Q96HY6 314 aa18.49■□□□□ 0.55
DDX41-208ENST00000507955 KNDC1Q76NI1 1749 aa18.48■□□□□ 0.55
DDX41-208ENST00000507955 RWDD1Q9H446 243 aaPredicted RBP18.48■□□□□ 0.55
DDX41-208ENST00000507955 MON2Q7Z3U7 1717 aa18.47■□□□□ 0.55
DDX41-208ENST00000507955 AATKQ6ZMQ8 1374 aa18.47■□□□□ 0.55
DDX41-208ENST00000507955 CDK12Q9NYV4 1490 aaPredicted RBP18.47■□□□□ 0.55
DDX41-208ENST00000507955 VAMP4O75379 141 aa18.46■□□□□ 0.55
DDX41-208ENST00000507955 NUTM2GQ5VZR2 741 aa18.46■□□□□ 0.55
DDX41-208ENST00000507955 C8orf58Q8NAV2 365 aa18.46■□□□□ 0.55
DDX41-208ENST00000507955 KRT24Q2M2I5 525 aa18.46■□□□□ 0.55
DDX41-208ENST00000507955 USP35Q9P2H5 1018 aa18.46■□□□□ 0.55
DDX41-208ENST00000507955 C3P01024 1663 aa18.46■□□□□ 0.55
DDX41-208ENST00000507955 USP19O94966 1318 aa18.44■□□□□ 0.54
DDX41-208ENST00000507955 AKAP12Q02952 1782 aa18.44■□□□□ 0.54
DDX41-208ENST00000507955 ITSN1Q15811 1721 aa18.44■□□□□ 0.54
DDX41-208ENST00000507955 PLEKHG3A1L390 1219 aa18.44■□□□□ 0.54
DDX41-208ENST00000507955 MCM10Q7L590 875 aa18.44■□□□□ 0.54
DDX41-208ENST00000507955 C1orf115Q9H7X2 142 aa18.44■□□□□ 0.54
DDX41-208ENST00000507955 DDX19BQ9UMR2 479 aa18.44■□□□□ 0.54
DDX41-208ENST00000507955 NGDNQ8NEJ9 315 aaKnown RBP18.43■□□□□ 0.54
DDX41-208ENST00000507955 ZBTB40Q9NUA8 1239 aa18.42■□□□□ 0.54
DDX41-208ENST00000507955 USP6P35125 1406 aa18.42■□□□□ 0.54
DDX41-208ENST00000507955 GNAI1P63096 354 aa18.42■□□□□ 0.54
DDX41-208ENST00000507955 ZNF853P0CG23 659 aa18.41■□□□□ 0.54
DDX41-208ENST00000507955 KCNA6P17658 529 aa18.41■□□□□ 0.54
DDX41-208ENST00000507955 TWISTNBQ3B726 338 aaPredicted RBP18.41■□□□□ 0.54
DDX41-208ENST00000507955 KIF16BQ96L93 1317 aa18.41■□□□□ 0.54
DDX41-208ENST00000507955 MRPL50Q8N5N7 158 aaKnown RBP18.41■□□□□ 0.54
DDX41-208ENST00000507955 IFT57Q9NWB7 429 aa18.41■□□□□ 0.54
DDX41-208ENST00000507955 DLG5Q8TDM6 1919 aa18.41■□□□□ 0.54
DDX41-208ENST00000507955 IPO8O15397 1037 aaKnown RBP18.4■□□□□ 0.54
DDX41-208ENST00000507955 FOXO3O43524 673 aa18.4■□□□□ 0.54
DDX41-208ENST00000507955 AAMPQ13685 434 aa18.4■□□□□ 0.54
DDX41-208ENST00000507955 ALDH1L2Q3SY69 923 aa18.4■□□□□ 0.54
DDX41-208ENST00000507955 THEMISQ8N1K5 641 aaPredicted RBP18.4■□□□□ 0.54
DDX41-208ENST00000507955 MIS18AQ9NYP9 233 aa18.4■□□□□ 0.54
DDX41-208ENST00000507955 CFAP44Q96MT7 982 aa18.4■□□□□ 0.54
DDX41-208ENST00000507955 TBX22Q9Y458 520 aa18.4■□□□□ 0.54
DDX41-208ENST00000507955 NFKBIBQ15653 356 aa18.39■□□□□ 0.54
DDX41-208ENST00000507955 OVOS2A0A0J9YW53 1432 aa18.39■□□□□ 0.53
DDX41-208ENST00000507955 OVOS2Q6IE36 1432 aa18.39■□□□□ 0.53
DDX41-208ENST00000507955 MAP3K19Q56UN5 1328 aa18.39■□□□□ 0.53
DDX41-208ENST00000507955 RGPD8O14715 1765 aaPredicted RBP18.39■□□□□ 0.53
DDX41-208ENST00000507955 DAXXQ9UER7 740 aaPredicted RBP18.38■□□□□ 0.53
DDX41-208ENST00000507955 IL27Q8NEV9 243 aa18.37■□□□□ 0.53
DDX41-208ENST00000507955 PEAK1Q9H792 1746 aa18.37■□□□□ 0.53
DDX41-208ENST00000507955 CALD1Q05682 793 aaKnown RBP18.36■□□□□ 0.53
DDX41-208ENST00000507955 FER1L4A9Z1Z3 1794 aa18.36■□□□□ 0.53
DDX41-208ENST00000507955 PLEKHG5O94827 1062 aa18.36■□□□□ 0.53
DDX41-208ENST00000507955 HDAC1Q13547 482 aaPredicted RBP18.36■□□□□ 0.53
DDX41-208ENST00000507955 NRKQ7Z2Y5 1582 aa18.35■□□□□ 0.53
DDX41-208ENST00000507955 ZBTB7BO15156 539 aaPredicted RBP18.35■□□□□ 0.53
DDX41-208ENST00000507955 LNPKQ9C0E8 428 aa18.35■□□□□ 0.53
DDX41-208ENST00000507955 TOPAZ1Q8N9V7 1692 aa18.35■□□□□ 0.53
DDX41-208ENST00000507955 ARHGAP23Q9P227 1491 aa18.35■□□□□ 0.53
DDX41-208ENST00000507955 NLRP6P59044 892 aa18.35■□□□□ 0.53
DDX41-208ENST00000507955 SLIT1O75093 1534 aa18.34■□□□□ 0.53
DDX41-208ENST00000507955 SSH2Q76I76 1423 aa18.34■□□□□ 0.53
DDX41-208ENST00000507955 LMOD3Q0VAK6 560 aa18.33■□□□□ 0.53
DDX41-208ENST00000507955 VIRMAQ69YN4 1812 aaKnown RBP18.33■□□□□ 0.53
DDX41-208ENST00000507955 C14orf37Q86TY3 774 aa18.33■□□□□ 0.53
DDX41-208ENST00000507955 AMPHP49418 695 aa18.33■□□□□ 0.52
DDX41-208ENST00000507955 MTHFSDQ2M296 383 aaKnown RBP18.32■□□□□ 0.52
DDX41-208ENST00000507955 SMC5Q8IY18 1101 aa18.32■□□□□ 0.52
DDX41-208ENST00000507955 LTV1Q96GA3 475 aaPredicted RBP18.32■□□□□ 0.52
DDX41-208ENST00000507955 DIP2AQ14689 1571 aa18.31■□□□□ 0.52
DDX41-208ENST00000507955 USP31Q70CQ4 1352 aa18.31■□□□□ 0.52
DDX41-208ENST00000507955 SIRT2Q8IXJ6 389 aa18.31■□□□□ 0.52
DDX41-208ENST00000507955 EYA1Q99502 592 aa18.31■□□□□ 0.52
DDX41-208ENST00000507955 RIMS1Q86UR5 1692 aaKnown RBP18.31■□□□□ 0.52
DDX41-208ENST00000507955 BRPF1P55201 1214 aaPredicted RBP18.3■□□□□ 0.52
DDX41-208ENST00000507955 ZNF428Q96B54 188 aa18.3■□□□□ 0.52
DDX41-208ENST00000507955 ABTB2Q8N961 1025 aa18.29■□□□□ 0.52
DDX41-208ENST00000507955 PTCH1Q13635 1447 aa18.28■□□□□ 0.52
DDX41-208ENST00000507955 CHL1O00533 1208 aa18.28■□□□□ 0.52
DDX41-208ENST00000507955 MFAP1P55081 439 aaKnown RBP18.28■□□□□ 0.52
DDX41-208ENST00000507955 ANKRD45Q5TZF3 282 aa18.28■□□□□ 0.52
DDX41-208ENST00000507955 FRAT2O75474 233 aaPredicted RBP18.27■□□□□ 0.52
DDX41-208ENST00000507955 GSE1Q14687 1217 aa18.27■□□□□ 0.52
DDX41-208ENST00000507955 ABCC4O15439 1325 aa18.27■□□□□ 0.52
DDX41-208ENST00000507955 TTC21AQ8NDW8 1320 aa18.27■□□□□ 0.52
DDX41-208ENST00000507955 NUCB1Q02818 461 aa18.27■□□□□ 0.51
DDX41-208ENST00000507955 USHBP1Q8N6Y0 703 aa18.27■□□□□ 0.51
DDX41-208ENST00000507955 ARHGAP45Q92619 1136 aa18.27■□□□□ 0.51
DDX41-208ENST00000507955 ZBTB7CA1YPR0 619 aa18.26■□□□□ 0.51
DDX41-208ENST00000507955 CHD1LQ86WJ1 897 aa18.26■□□□□ 0.51
DDX41-208ENST00000507955 SLKQ9H2G2 1235 aaPredicted RBP18.25■□□□□ 0.51
DDX41-208ENST00000507955 CEP170BQ9Y4F5 1589 aaPredicted RBP18.25■□□□□ 0.51
DDX41-208ENST00000507955 NALCNQ8IZF0 1738 aa18.25■□□□□ 0.51
DDX41-208ENST00000507955 FLT4P35916 1363 aa18.25■□□□□ 0.51
DDX41-208ENST00000507955 SPRYD3Q8NCJ5 442 aa18.25■□□□□ 0.51
DDX41-208ENST00000507955 TBC1D32Q96NH3 1257 aa18.25■□□□□ 0.51
DDX41-208ENST00000507955 RTN4Q9NQC3 1192 aaKnown RBP18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms