RNA–Protein interactions for RNA: ENST00000507855.5

CCDC30-212, Transcript of coiled-coil domain containing 30, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC30, Length 2,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-212ENST00000507855 J3QL48 77 aa5.46□□□□□ -1.54
CCDC30-212ENST00000507855 SKIP12755 728 aa5.46□□□□□ -1.54
CCDC30-212ENST00000507855 EIF4G2P78344 907 aaKnown RBP eCLIP5.46□□□□□ -1.54
CCDC30-212ENST00000507855 NCOA4Q13772 614 aa5.46□□□□□ -1.54
CCDC30-212ENST00000507855 EHBP1Q8NDI1 1231 aa5.46□□□□□ -1.54
CCDC30-212ENST00000507855 KIAA1024Q9UPX6 916 aa5.46□□□□□ -1.54
CCDC30-212ENST00000507855 KANK4Q5T7N3 995 aaPredicted RBP5.45□□□□□ -1.54
CCDC30-212ENST00000507855 DZIP3Q86Y13 1208 aaKnown RBP5.45□□□□□ -1.54
CCDC30-212ENST00000507855 ARXQ96QS3 562 aa5.45□□□□□ -1.54
CCDC30-212ENST00000507855 SCNN1AP37088 669 aa5.45□□□□□ -1.54
CCDC30-212ENST00000507855 CRTC2Q53ET0 693 aaPredicted RBP5.45□□□□□ -1.54
CCDC30-212ENST00000507855 ZNF697Q5TEC3 545 aa5.45□□□□□ -1.54
CCDC30-212ENST00000507855 TRAF7Q6Q0C0 670 aa5.45□□□□□ -1.54
CCDC30-212ENST00000507855 ZC3H4Q9UPT8 1303 aaKnown RBP5.44□□□□□ -1.54
CCDC30-212ENST00000507855 INTS6LQ5JSJ4 861 aaKnown RBP5.44□□□□□ -1.54
CCDC30-212ENST00000507855 ARMC2Q8NEN0 867 aa5.44□□□□□ -1.54
CCDC30-212ENST00000507855 KCTD15Q96SI1 283 aaPredicted RBP5.44□□□□□ -1.54
CCDC30-212ENST00000507855 SERPINA10Q9UK55 444 aa5.44□□□□□ -1.54
CCDC30-212ENST00000507855 USP17L3A6NCW0 530 aa5.44□□□□□ -1.54
CCDC30-212ENST00000507855 USP17L4A6NCW7 530 aa5.44□□□□□ -1.54
CCDC30-212ENST00000507855 USP17L5A8MUK1 530 aa5.44□□□□□ -1.54
CCDC30-212ENST00000507855 FSHRP23945 695 aa5.44□□□□□ -1.54
CCDC30-212ENST00000507855 GGCXP38435 758 aa5.44□□□□□ -1.54
CCDC30-212ENST00000507855 USP17L2Q6R6M4 530 aa5.44□□□□□ -1.54
CCDC30-212ENST00000507855 USP17L1Q7RTZ2 530 aa5.44□□□□□ -1.54
CCDC30-212ENST00000507855 RETREG2Q8NC44 543 aa5.44□□□□□ -1.54
CCDC30-212ENST00000507855 GPSM3Q9Y4H4 160 aa5.44□□□□□ -1.54
CCDC30-212ENST00000507855 ERVH48-1M5A8F1 160 aa5.43□□□□□ -1.54
CCDC30-212ENST00000507855 CLDN10P78369 228 aa5.43□□□□□ -1.54
CCDC30-212ENST00000507855 IFFO2Q5TF58 517 aa5.43□□□□□ -1.54
CCDC30-212ENST00000507855 RNF135Q8IUD6 432 aa5.43□□□□□ -1.54
CCDC30-212ENST00000507855 PLPP7Q8NBV4 271 aa5.43□□□□□ -1.54
CCDC30-212ENST00000507855 GPKOWQ92917 476 aaPredicted RBP eCLIP5.43□□□□□ -1.54
CCDC30-212ENST00000507855 SLC10A4Q96EP9 437 aa5.43□□□□□ -1.54
CCDC30-212ENST00000507855 SLAIN2Q9P270 581 aa5.43□□□□□ -1.54
CCDC30-212ENST00000507855 ATP9BO43861 1147 aa5.43□□□□□ -1.54
CCDC30-212ENST00000507855 GDF9O60383 454 aa5.43□□□□□ -1.54
CCDC30-212ENST00000507855 ADD1P35611 737 aaKnown RBP5.43□□□□□ -1.54
CCDC30-212ENST00000507855 RPIAP49247 311 aa5.43□□□□□ -1.54
CCDC30-212ENST00000507855 OXLD1Q5BKU9 147 aa5.43□□□□□ -1.54
CCDC30-212ENST00000507855 WWC1Q8IX03 1113 aa5.43□□□□□ -1.54
CCDC30-212ENST00000507855 STK32AQ8WU08 396 aa5.43□□□□□ -1.54
CCDC30-212ENST00000507855 CD2BP2O95400 341 aaKnown RBP5.42□□□□□ -1.54
CCDC30-212ENST00000507855 WNT7BP56706 349 aa5.42□□□□□ -1.54
CCDC30-212ENST00000507855 VASH1Q7L8A9 365 aaPredicted RBP5.42□□□□□ -1.54
CCDC30-212ENST00000507855 ZMIZ1Q9ULJ6 1067 aa5.42□□□□□ -1.54
CCDC30-212ENST00000507855 CHIC2Q9UKJ5 165 aa5.42□□□□□ -1.54
CCDC30-212ENST00000507855 ESPNB1AK53 854 aa5.41□□□□□ -1.54
CCDC30-212ENST00000507855 ALDH1A1P00352 501 aa5.41□□□□□ -1.54
CCDC30-212ENST00000507855 SLFNL1Q499Z3 407 aa5.41□□□□□ -1.54
CCDC30-212ENST00000507855 TRMT44Q8IYL2 757 aaKnown RBP5.41□□□□□ -1.54
CCDC30-212ENST00000507855 ZNF594Q96JF6 807 aaPredicted RBP5.41□□□□□ -1.54
CCDC30-212ENST00000507855 WNT7AO00755 349 aa5.4□□□□□ -1.54
CCDC30-212ENST00000507855 VARSP26640 1264 aaKnown RBP5.4□□□□□ -1.54
CCDC30-212ENST00000507855 CBLBQ13191 982 aa5.4□□□□□ -1.54
CCDC30-212ENST00000507855 ZNF598Q86UK7 904 aaKnown RBP5.4□□□□□ -1.54
CCDC30-212ENST00000507855 ZNF784Q8NCA9 323 aaPredicted RBP5.4□□□□□ -1.54
CCDC30-212ENST00000507855 PNMA1Q8ND90 353 aa5.4□□□□□ -1.54
CCDC30-212ENST00000507855 CYLDQ9NQC7 956 aa5.4□□□□□ -1.54
CCDC30-212ENST00000507855 MKRN1Q9UHC7 482 aaKnown RBP5.4□□□□□ -1.54
CCDC30-212ENST00000507855 PCDHB11Q9Y5F2 797 aa5.4□□□□□ -1.54
CCDC30-212ENST00000507855 DKK1O94907 266 aa5.4□□□□□ -1.55
CCDC30-212ENST00000507855 KDF1Q8NAX2 398 aaPredicted RBP5.4□□□□□ -1.55
CCDC30-212ENST00000507855 CDK15Q96Q40 435 aa5.4□□□□□ -1.55
CCDC30-212ENST00000507855 ZFAND3Q9H8U3 227 aa5.4□□□□□ -1.55
CCDC30-212ENST00000507855 ZBTB7BO15156 539 aaPredicted RBP5.39□□□□□ -1.55
CCDC30-212ENST00000507855 PPP1R26Q5T8A7 1209 aaPredicted RBP5.39□□□□□ -1.55
CCDC30-212ENST00000507855 ITPKCQ96DU7 683 aa5.39□□□□□ -1.55
CCDC30-212ENST00000507855 LILRA1O75019 489 aa5.39□□□□□ -1.55
CCDC30-212ENST00000507855 SOX11P35716 441 aa5.39□□□□□ -1.55
CCDC30-212ENST00000507855 HPS1Q92902 700 aa5.39□□□□□ -1.55
CCDC30-212ENST00000507855 SMPD1P17405 629 aa5.38□□□□□ -1.55
CCDC30-212ENST00000507855 PBXIP1Q96AQ6 731 aa5.38□□□□□ -1.55
CCDC30-212ENST00000507855 KLF16Q9BXK1 252 aaPredicted RBP5.38□□□□□ -1.55
CCDC30-212ENST00000507855 RAB6BQ9NRW1 208 aa5.38□□□□□ -1.55
CCDC30-212ENST00000507855 DOLKQ9UPQ8 538 aa5.38□□□□□ -1.55
CCDC30-212ENST00000507855 PCDHGA11Q9Y5H2 935 aa5.38□□□□□ -1.55
CCDC30-212ENST00000507855 ADH1CP00326 375 aa5.38□□□□□ -1.55
CCDC30-212ENST00000507855 TOR4AQ9NXH8 423 aa5.38□□□□□ -1.55
CCDC30-212ENST00000507855 PTK7Q13308 1070 aa5.37□□□□□ -1.55
CCDC30-212ENST00000507855 TMEM164Q5U3C3 297 aa5.37□□□□□ -1.55
CCDC30-212ENST00000507855 OGFOD1Q8N543 542 aa5.37□□□□□ -1.55
CCDC30-212ENST00000507855 AGBL1Q96MI9 1066 aa5.37□□□□□ -1.55
CCDC30-212ENST00000507855 OSBPL3Q9H4L5 887 aa5.37□□□□□ -1.55
CCDC30-212ENST00000507855 TMEM88BA6NKF7 163 aa5.37□□□□□ -1.55
CCDC30-212ENST00000507855 NNTQ13423 1086 aa5.37□□□□□ -1.55
CCDC30-212ENST00000507855 SFI1A8K8P3 1242 aa5.36□□□□□ -1.55
CCDC30-212ENST00000507855 RASA1P20936 1047 aa5.36□□□□□ -1.55
CCDC30-212ENST00000507855 FAM69CQ0P6D2 419 aa5.36□□□□□ -1.55
CCDC30-212ENST00000507855 NBPF20Q3BBV1 942 aa5.36□□□□□ -1.55
CCDC30-212ENST00000507855 CAPN12Q6ZSI9 719 aa5.36□□□□□ -1.55
CCDC30-212ENST00000507855 PURBQ96QR8 312 aaKnown RBP5.36□□□□□ -1.55
CCDC30-212ENST00000507855 MAP4K5Q9Y4K4 846 aa5.36□□□□□ -1.55
CCDC30-212ENST00000507855 USP3Q9Y6I4 520 aa5.36□□□□□ -1.55
CCDC30-212ENST00000507855 DPYDQ12882 1025 aa5.35□□□□□ -1.55
CCDC30-212ENST00000507855 HOMEZQ8IX15 550 aa5.35□□□□□ -1.55
CCDC30-212ENST00000507855 VRTNQ9H8Y1 702 aa5.35□□□□□ -1.55
CCDC30-212ENST00000507855 PODXL2Q9NZ53 605 aa5.35□□□□□ -1.55
CCDC30-212ENST00000507855 V9GY48 417 aaPredicted RBP5.35□□□□□ -1.55
CCDC30-212ENST00000507855 USP17L15C9J2P7 530 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms