RNA–Protein interactions for RNA: ENST00000504010.5

NR1I3-219, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 944 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-219ENST00000504010 ATP7BP35670 1465 aa12.66□□□□□ -0.38
NR1I3-219ENST00000504010 OVOS2A0A0G2JMS6 1433 aa12.66□□□□□ -0.38
NR1I3-219ENST00000504010 OVOS2A0A0J9YW53 1432 aa12.66□□□□□ -0.38
NR1I3-219ENST00000504010 OVOS2Q6IE36 1432 aa12.66□□□□□ -0.38
NR1I3-219ENST00000504010 NGDNQ8NEJ9 315 aaKnown RBP12.66□□□□□ -0.38
NR1I3-219ENST00000504010 USP35Q9P2H5 1018 aa12.66□□□□□ -0.38
NR1I3-219ENST00000504010 MYOM1P52179 1685 aa12.66□□□□□ -0.38
NR1I3-219ENST00000504010 PTGER2P43116 358 aa12.65□□□□□ -0.38
NR1I3-219ENST00000504010 CHRNA2Q15822 529 aa12.65□□□□□ -0.38
NR1I3-219ENST00000504010 NUDT16Q96DE0 195 aaKnown RBP12.64□□□□□ -0.39
NR1I3-219ENST00000504010 SYT17Q9BSW7 474 aa12.64□□□□□ -0.39
NR1I3-219ENST00000504010 EVC2Q86UK5 1308 aa12.63□□□□□ -0.39
NR1I3-219ENST00000504010 ITSN1Q15811 1721 aa12.63□□□□□ -0.39
NR1I3-219ENST00000504010 SBF2Q86WG5 1849 aa12.63□□□□□ -0.39
NR1I3-219ENST00000504010 GIGYF1O75420 1035 aaPredicted RBP12.63□□□□□ -0.39
NR1I3-219ENST00000504010 FHDC1Q9C0D6 1143 aaPredicted RBP12.63□□□□□ -0.39
NR1I3-219ENST00000504010 BCL11BQ9C0K0 894 aaPredicted RBP12.63□□□□□ -0.39
NR1I3-219ENST00000504010 CPDO75976 1380 aa12.63□□□□□ -0.39
NR1I3-219ENST00000504010 PEAK1Q9H792 1746 aa12.62□□□□□ -0.39
NR1I3-219ENST00000504010 MAP3K5Q99683 1374 aa12.62□□□□□ -0.39
NR1I3-219ENST00000504010 ZBTB7AO95365 584 aa12.62□□□□□ -0.39
NR1I3-219ENST00000504010 ZC3H6P61129 1189 aaKnown RBP12.62□□□□□ -0.39
NR1I3-219ENST00000504010 LARP1Q6PKG0 1096 aaKnown RBP12.62□□□□□ -0.39
NR1I3-219ENST00000504010 TMC1Q8TDI8 760 aa12.62□□□□□ -0.39
NR1I3-219ENST00000504010 ANO8Q9HCE9 1232 aaPredicted RBP12.62□□□□□ -0.39
NR1I3-219ENST00000504010 TMF1P82094 1093 aa12.61□□□□□ -0.39
NR1I3-219ENST00000504010 MTFR1LQ9H019 292 aa12.61□□□□□ -0.39
NR1I3-219ENST00000504010 CABP1Q9NZU7 370 aa12.61□□□□□ -0.39
NR1I3-219ENST00000504010 LMO7Q8WWI1 1683 aa12.61□□□□□ -0.39
NR1I3-219ENST00000504010 SLC12A5Q9H2X9 1139 aa12.6□□□□□ -0.39
NR1I3-219ENST00000504010 STK32BQ9NY57 414 aa12.6□□□□□ -0.39
NR1I3-219ENST00000504010 BCL9O00512 1426 aa12.6□□□□□ -0.39
NR1I3-219ENST00000504010 PDGFDQ9GZP0 370 aaPredicted RBP12.59□□□□□ -0.39
NR1I3-219ENST00000504010 ATF5Q9Y2D1 282 aaPredicted RBP12.59□□□□□ -0.39
NR1I3-219ENST00000504010 AATKQ6ZMQ8 1374 aa12.58□□□□□ -0.4
NR1I3-219ENST00000504010 CRB1P82279 1406 aa12.58□□□□□ -0.4
NR1I3-219ENST00000504010 PPIP5K1Q6PFW1 1433 aa12.58□□□□□ -0.4
NR1I3-219ENST00000504010 POTEDQ86YR6 584 aa12.58□□□□□ -0.4
NR1I3-219ENST00000504010 SGIP1Q9BQI5 828 aa12.58□□□□□ -0.4
NR1I3-219ENST00000504010 SBNO2Q9Y2G9 1366 aa12.57□□□□□ -0.4
NR1I3-219ENST00000504010 SLC15A2Q16348 729 aa12.57□□□□□ -0.4
NR1I3-219ENST00000504010 DDB1Q16531 1140 aa12.57□□□□□ -0.4
NR1I3-219ENST00000504010 PROM2Q8N271 834 aa12.57□□□□□ -0.4
NR1I3-219ENST00000504010 ARXQ96QS3 562 aa12.57□□□□□ -0.4
NR1I3-219ENST00000504010 COL5A2P05997 1499 aaPredicted RBP12.57□□□□□ -0.4
NR1I3-219ENST00000504010 KIF7Q2M1P5 1343 aa12.57□□□□□ -0.4
NR1I3-219ENST00000504010 CDCA7Q9BWT1 371 aaPredicted RBP12.56□□□□□ -0.4
NR1I3-219ENST00000504010 FOXD4L1Q9NU39 408 aa12.56□□□□□ -0.4
NR1I3-219ENST00000504010 CCDC61Q9Y6R9 512 aa12.56□□□□□ -0.4
NR1I3-219ENST00000504010 USP19O94966 1318 aa12.56□□□□□ -0.4
NR1I3-219ENST00000504010 ACEP12821 1306 aa12.56□□□□□ -0.4
NR1I3-219ENST00000504010 POLR3AO14802 1390 aaPredicted RBP12.56□□□□□ -0.4
NR1I3-219ENST00000504010 LRRC37A3O60309 1634 aa12.55□□□□□ -0.4
NR1I3-219ENST00000504010 GPR162Q16538 588 aa12.55□□□□□ -0.4
NR1I3-219ENST00000504010 TXNRD1Q16881 649 aa12.55□□□□□ -0.4
NR1I3-219ENST00000504010 NUTM2GQ5VZR2 741 aa12.54□□□□□ -0.4
NR1I3-219ENST00000504010 ABTB2Q8N961 1025 aa12.54□□□□□ -0.4
NR1I3-219ENST00000504010 WASHC2AQ641Q2 1341 aa12.54□□□□□ -0.4
NR1I3-219ENST00000504010 TOPAZ1Q8N9V7 1692 aa12.54□□□□□ -0.4
NR1I3-219ENST00000504010 AKAP12Q02952 1782 aa12.53□□□□□ -0.4
NR1I3-219ENST00000504010 SLC4A2P04920 1241 aa12.53□□□□□ -0.4
NR1I3-219ENST00000504010 CNGB1Q14028 1251 aaPredicted RBP12.53□□□□□ -0.4
NR1I3-219ENST00000504010 NLRP13Q86W25 1043 aa12.53□□□□□ -0.4
NR1I3-219ENST00000504010 PLEKHG3A1L390 1219 aa12.52□□□□□ -0.41
NR1I3-219ENST00000504010 GCP02774 474 aa12.52□□□□□ -0.41
NR1I3-219ENST00000504010 BRD4O60885 1362 aaPredicted RBP12.52□□□□□ -0.41
NR1I3-219ENST00000504010 CCDC7Q96M83 1385 aa12.52□□□□□ -0.41
NR1I3-219ENST00000504010 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.51□□□□□ -0.41
NR1I3-219ENST00000504010 SHANK3Q9BYB0 1731 aa12.51□□□□□ -0.41
NR1I3-219ENST00000504010 WNK3Q9BYP7 1800 aa12.51□□□□□ -0.41
NR1I3-219ENST00000504010 CDCA8Q53HL2 280 aa12.5□□□□□ -0.41
NR1I3-219ENST00000504010 PTF1AQ7RTS3 328 aa12.5□□□□□ -0.41
NR1I3-219ENST00000504010 MARCH10Q8NA82 808 aaPredicted RBP12.5□□□□□ -0.41
NR1I3-219ENST00000504010 CD163L1Q9NR16 1453 aa12.5□□□□□ -0.41
NR1I3-219ENST00000504010 A0A1W2PP64 1363 aa12.49□□□□□ -0.41
NR1I3-219ENST00000504010 KTN1Q86UP2 1357 aaKnown RBP12.49□□□□□ -0.41
NR1I3-219ENST00000504010 TOM1L2Q6ZVM7 507 aa12.49□□□□□ -0.41
NR1I3-219ENST00000504010 SLC16A10Q8TF71 515 aa12.49□□□□□ -0.41
NR1I3-219ENST00000504010 PANK3Q9H999 370 aa12.49□□□□□ -0.41
NR1I3-219ENST00000504010 ZNF316A6NFI3 1004 aaPredicted RBP12.48□□□□□ -0.41
NR1I3-219ENST00000504010 GRIN3BO60391 1043 aa12.48□□□□□ -0.41
NR1I3-219ENST00000504010 HDGFL2Q7Z4V5 671 aaPredicted RBP12.48□□□□□ -0.41
NR1I3-219ENST00000504010 CARD14Q9BXL6 1004 aa12.48□□□□□ -0.41
NR1I3-219ENST00000504010 WDR17Q8IZU2 1322 aa12.47□□□□□ -0.41
NR1I3-219ENST00000504010 SLC24A1O60721 1099 aa12.47□□□□□ -0.41
NR1I3-219ENST00000504010 POLD1P28340 1107 aa12.47□□□□□ -0.41
NR1I3-219ENST00000504010 DDX10Q13206 875 aaKnown RBP12.47□□□□□ -0.41
NR1I3-219ENST00000504010 NME9Q86XW9 330 aa12.47□□□□□ -0.41
NR1I3-219ENST00000504010 PUS7Q96PZ0 661 aaKnown RBP12.47□□□□□ -0.41
NR1I3-219ENST00000504010 PAPPAQ13219 1627 aa12.47□□□□□ -0.41
NR1I3-219ENST00000504010 USP6P35125 1406 aa12.46□□□□□ -0.41
NR1I3-219ENST00000504010 SOX12O15370 315 aa12.46□□□□□ -0.41
NR1I3-219ENST00000504010 HSPA6P17066 643 aa12.46□□□□□ -0.41
NR1I3-219ENST00000504010 TERF2IPQ9NYB0 399 aa12.46□□□□□ -0.41
NR1I3-219ENST00000504010 CPSF1Q10570 1443 aaKnown RBP12.45□□□□□ -0.42
NR1I3-219ENST00000504010 COL24A1Q17RW2 1714 aa12.45□□□□□ -0.42
NR1I3-219ENST00000504010 NHSQ6T4R5 1651 aa12.45□□□□□ -0.42
NR1I3-219ENST00000504010 TTC21BQ7Z4L5 1316 aa12.45□□□□□ -0.42
NR1I3-219ENST00000504010 EXOC5O00471 708 aa12.45□□□□□ -0.42
NR1I3-219ENST00000504010 CARD10Q9BWT7 1032 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms