RNA–Protein interactions for RNA: ENST00000503674.5

SDHA-203, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 2,426 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-203ENST00000503674 ANKRD36BQ8N2N9 1353 aa17.33■□□□□ 0.36
SDHA-203ENST00000503674 NRXN3Q9Y4C0 1643 aa17.33■□□□□ 0.36
SDHA-203ENST00000503674 SHPRHQ149N8 1683 aa17.33■□□□□ 0.36
SDHA-203ENST00000503674 SLC12A5Q9H2X9 1139 aa17.32■□□□□ 0.36
SDHA-203ENST00000503674 A0A0U1RQG5 324 aaPredicted RBP17.32■□□□□ 0.36
SDHA-203ENST00000503674 GOLGA6L22H0YM25 854 aa17.32■□□□□ 0.36
SDHA-203ENST00000503674 DYNC1I1O14576 645 aa17.32■□□□□ 0.36
SDHA-203ENST00000503674 FTSJ3Q8IY81 847 aaKnown RBP17.32■□□□□ 0.36
SDHA-203ENST00000503674 K7ELQ4 463 aaPredicted RBP17.31■□□□□ 0.36
SDHA-203ENST00000503674 BAG4O95429 457 aaKnown RBP17.31■□□□□ 0.36
SDHA-203ENST00000503674 UBR1Q8IWV7 1749 aa17.31■□□□□ 0.36
SDHA-203ENST00000503674 NSD2O96028 1365 aa17.3■□□□□ 0.36
SDHA-203ENST00000503674 STK26Q9P289 416 aa17.29■□□□□ 0.36
SDHA-203ENST00000503674 ATAD2Q6PL18 1390 aa17.29■□□□□ 0.36
SDHA-203ENST00000503674 CCDC27Q2M243 656 aa17.29■□□□□ 0.36
SDHA-203ENST00000503674 GAS2L2Q8NHY3 880 aa17.29■□□□□ 0.36
SDHA-203ENST00000503674 RBSNQ9H1K0 784 aa17.29■□□□□ 0.36
SDHA-203ENST00000503674 ZKSCAN5Q9Y2L8 839 aa17.29■□□□□ 0.36
SDHA-203ENST00000503674 KNDC1Q76NI1 1749 aa17.29■□□□□ 0.36
SDHA-203ENST00000503674 ANKRD26Q9UPS8 1709 aa17.29■□□□□ 0.36
SDHA-203ENST00000503674 TNRQ92752 1358 aa17.28■□□□□ 0.36
SDHA-203ENST00000503674 ZSCAN23Q3MJ62 389 aa17.28■□□□□ 0.36
SDHA-203ENST00000503674 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.28■□□□□ 0.36
SDHA-203ENST00000503674 CSPP1Q1MSJ5 1256 aa17.27■□□□□ 0.36
SDHA-203ENST00000503674 PRAM1Q96QH2 718 aa17.27■□□□□ 0.36
SDHA-203ENST00000503674 ARID3AQ99856 593 aa17.27■□□□□ 0.36
SDHA-203ENST00000503674 TRIM27P14373 513 aa17.27■□□□□ 0.35
SDHA-203ENST00000503674 DDX19BQ9UMR2 479 aa17.27■□□□□ 0.35
SDHA-203ENST00000503674 NUCB1Q02818 461 aa17.26■□□□□ 0.35
SDHA-203ENST00000503674 PRDM10Q9NQV6 1147 aa17.26■□□□□ 0.35
SDHA-203ENST00000503674 RBM42Q9BTD8 480 aaKnown RBP17.26■□□□□ 0.35
SDHA-203ENST00000503674 CABP2Q9NPB3 220 aa17.26■□□□□ 0.35
SDHA-203ENST00000503674 ZHX1Q9UKY1 873 aaPredicted RBP17.26■□□□□ 0.35
SDHA-203ENST00000503674 MCM5P33992 734 aa17.25■□□□□ 0.35
SDHA-203ENST00000503674 SAFB2Q14151 953 aaKnown RBP eCLIP17.25■□□□□ 0.353e-7■□□□□ 9.3
SDHA-203ENST00000503674 UTP14CQ5TAP6 766 aaKnown RBP17.25■□□□□ 0.35
SDHA-203ENST00000503674 CAVIN1Q6NZI2 390 aaKnown RBP17.25■□□□□ 0.35
SDHA-203ENST00000503674 MORC1Q86VD1 984 aa17.25■□□□□ 0.35
SDHA-203ENST00000503674 SASS6Q6UVJ0 657 aa17.25■□□□□ 0.35
SDHA-203ENST00000503674 ABCC11Q96J66 1382 aa17.24■□□□□ 0.35
SDHA-203ENST00000503674 DMTNQ08495 405 aa17.24■□□□□ 0.35
SDHA-203ENST00000503674 BMP2KLQ5H9B9 411 aa17.24■□□□□ 0.35
SDHA-203ENST00000503674 ITPRIPQ8IWB1 547 aa17.24■□□□□ 0.35
SDHA-203ENST00000503674 FER1L4A9Z1Z3 1794 aa17.24■□□□□ 0.35
SDHA-203ENST00000503674 PRIM1P49642 420 aaKnown RBP17.23■□□□□ 0.35
SDHA-203ENST00000503674 CCDC94Q9BW85 323 aaPredicted RBP17.23■□□□□ 0.35
SDHA-203ENST00000503674 LNPKQ9C0E8 428 aa17.23■□□□□ 0.35
SDHA-203ENST00000503674 SRPK2P78362 688 aaKnown RBP17.23■□□□□ 0.35
SDHA-203ENST00000503674 LMBRD1Q9NUN5 540 aa17.23■□□□□ 0.35
SDHA-203ENST00000503674 A0A1W2PP64 1363 aa17.23■□□□□ 0.35
SDHA-203ENST00000503674 MINK1Q8N4C8 1332 aaPredicted RBP17.23■□□□□ 0.35
SDHA-203ENST00000503674 ADAMTSL3P82987 1691 aa17.23■□□□□ 0.35
SDHA-203ENST00000503674 ZSCAN20P17040 1043 aaPredicted RBP17.22■□□□□ 0.35
SDHA-203ENST00000503674 HDGFP51858 240 aaKnown RBP17.22■□□□□ 0.35
SDHA-203ENST00000503674 MCTP1Q6DN14 999 aa17.22■□□□□ 0.35
SDHA-203ENST00000503674 ZBTB40Q9NUA8 1239 aa17.22■□□□□ 0.35
SDHA-203ENST00000503674 SENP3Q9H4L4 574 aaPredicted RBP17.22■□□□□ 0.35
SDHA-203ENST00000503674 C3P01024 1663 aa17.22■□□□□ 0.35
SDHA-203ENST00000503674 KIF20BQ96Q89 1820 aa17.22■□□□□ 0.35
SDHA-203ENST00000503674 MED14O60244 1454 aa17.22■□□□□ 0.35
SDHA-203ENST00000503674 CT47B1P0C2W7 299 aaPredicted RBP17.21■□□□□ 0.35
SDHA-203ENST00000503674 CHD1LQ86WJ1 897 aa17.21■□□□□ 0.35
SDHA-203ENST00000503674 SMC4Q9NTJ3 1288 aa17.21■□□□□ 0.35
SDHA-203ENST00000503674 CD163L1Q9NR16 1453 aa17.21■□□□□ 0.35
SDHA-203ENST00000503674 ATF7IPQ6VMQ6 1270 aa17.21■□□□□ 0.35
SDHA-203ENST00000503674 TECPR2O15040 1411 aa17.2■□□□□ 0.34
SDHA-203ENST00000503674 CYP2E1P05181 493 aaPredicted RBP17.2■□□□□ 0.34
SDHA-203ENST00000503674 NCLP19338 710 aaKnown RBP17.2■□□□□ 0.34
SDHA-203ENST00000503674 FGD1P98174 961 aa17.2■□□□□ 0.34
SDHA-203ENST00000503674 CPS1P31327 1500 aa17.2■□□□□ 0.34
SDHA-203ENST00000503674 TMEM2Q9UHN6 1383 aa17.2■□□□□ 0.34
SDHA-203ENST00000503674 CEBPAP49715 358 aaPredicted RBP17.2■□□□□ 0.34
SDHA-203ENST00000503674 NCBP3Q53F19 620 aaKnown RBP17.2■□□□□ 0.34
SDHA-203ENST00000503674 AK9Q5TCS8 1911 aa17.2■□□□□ 0.34
SDHA-203ENST00000503674 TSR2Q969E8 191 aaKnown RBP17.19■□□□□ 0.34
SDHA-203ENST00000503674 TERF2IPQ9NYB0 399 aa17.19■□□□□ 0.34
SDHA-203ENST00000503674 RIMS1Q86UR5 1692 aaKnown RBP17.19■□□□□ 0.34
SDHA-203ENST00000503674 TBC1D9Q6ZT07 1266 aa17.19■□□□□ 0.34
SDHA-203ENST00000503674 TMEM57Q8N5G2 664 aa17.19■□□□□ 0.34
SDHA-203ENST00000503674 SSH1Q8WYL5 1049 aa17.19■□□□□ 0.34
SDHA-203ENST00000503674 TNNT2P45379 298 aaPredicted RBP17.18■□□□□ 0.34
SDHA-203ENST00000503674 PLPPR3Q6T4P5 718 aa17.18■□□□□ 0.34
SDHA-203ENST00000503674 CCDC39Q9UFE4 941 aa17.18■□□□□ 0.34
SDHA-203ENST00000503674 KIF16BQ96L93 1317 aa17.18■□□□□ 0.34
SDHA-203ENST00000503674 FAM135BQ49AJ0 1406 aa17.18■□□□□ 0.34
SDHA-203ENST00000503674 ATP7BP35670 1465 aa17.17■□□□□ 0.34
SDHA-203ENST00000503674 KDM4FA0A1W2PPD8 638 aa17.17■□□□□ 0.34
SDHA-203ENST00000503674 NUCB2P80303 420 aa17.17■□□□□ 0.34
SDHA-203ENST00000503674 GPT2Q8TD30 523 aa17.17■□□□□ 0.34
SDHA-203ENST00000503674 CDK19Q9BWU1 502 aa17.17■□□□□ 0.34
SDHA-203ENST00000503674 EXOSC9Q06265 439 aaKnown RBP17.17■□□□□ 0.34
SDHA-203ENST00000503674 NOB1Q9ULX3 412 aaKnown RBP17.17■□□□□ 0.34
SDHA-203ENST00000503674 METP08581 1390 aa17.17■□□□□ 0.34
SDHA-203ENST00000503674 PKP1Q13835 747 aa17.16■□□□□ 0.34
SDHA-203ENST00000503674 RBM27Q9P2N5 1060 aaKnown RBP17.16■□□□□ 0.34
SDHA-203ENST00000503674 SIRT1Q96EB6 747 aa17.16■□□□□ 0.34
SDHA-203ENST00000503674 LRSAM1Q6UWE0 723 aa17.15■□□□□ 0.34
SDHA-203ENST00000503674 MYRIPQ8NFW9 859 aa17.15■□□□□ 0.34
SDHA-203ENST00000503674 CFAP53Q96M91 514 aa17.15■□□□□ 0.34
SDHA-203ENST00000503674 HDGFL2Q7Z4V5 671 aaPredicted RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms