RNA–Protein interactions for RNA: ENST00000503464.1

TOPBP1-203, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-203ENST00000503464 PAK3O75914 559 aaPredicted RBP9.21□□□□□ -0.94
TOPBP1-203ENST00000503464 IL13P35225 146 aa9.21□□□□□ -0.94
TOPBP1-203ENST00000503464 SLAIN2Q9P270 581 aa9.21□□□□□ -0.94
TOPBP1-203ENST00000503464 ZNF521Q96K83 1311 aa9.21□□□□□ -0.94
TOPBP1-203ENST00000503464 PPM1GO15355 546 aaPredicted RBP9.2□□□□□ -0.94
TOPBP1-203ENST00000503464 SOX12O15370 315 aa9.2□□□□□ -0.94
TOPBP1-203ENST00000503464 DIAPH1O60610 1272 aaKnown RBP9.2□□□□□ -0.94
TOPBP1-203ENST00000503464 PLEKHF1Q96S99 279 aa9.2□□□□□ -0.94
TOPBP1-203ENST00000503464 AHDC1Q5TGY3 1603 aaPredicted RBP9.2□□□□□ -0.94
TOPBP1-203ENST00000503464 CAMTA1Q9Y6Y1 1673 aa9.2□□□□□ -0.94
TOPBP1-203ENST00000503464 ABCB7O75027 752 aa9.19□□□□□ -0.94
TOPBP1-203ENST00000503464 NPM3O75607 178 aaKnown RBP9.19□□□□□ -0.94
TOPBP1-203ENST00000503464 EIF4A2Q14240 407 aaKnown RBP9.19□□□□□ -0.94
TOPBP1-203ENST00000503464 HSP90AB2PQ58FF8 381 aa9.19□□□□□ -0.94
TOPBP1-203ENST00000503464 NPHP3Q7Z494 1330 aa9.19□□□□□ -0.94
TOPBP1-203ENST00000503464 FLT4P35916 1363 aa9.19□□□□□ -0.94
TOPBP1-203ENST00000503464 RTL1A6NKG5 1358 aa9.18□□□□□ -0.94
TOPBP1-203ENST00000503464 APAF1O14727 1248 aa9.18□□□□□ -0.94
TOPBP1-203ENST00000503464 U2AF1L5P0DN76 240 aaPredicted RBP9.18□□□□□ -0.94
TOPBP1-203ENST00000503464 U2AF1Q01081 240 aaKnown RBP eCLIP9.18□□□□□ -0.94
TOPBP1-203ENST00000503464 SOS2Q07890 1332 aaPredicted RBP9.18□□□□□ -0.94
TOPBP1-203ENST00000503464 KIF24Q5T7B8 1368 aa9.18□□□□□ -0.94
TOPBP1-203ENST00000503464 SPATA31A3Q5VYP0 1347 aa9.18□□□□□ -0.94
TOPBP1-203ENST00000503464 LMO7Q8WWI1 1683 aa9.18□□□□□ -0.94
TOPBP1-203ENST00000503464 RSPH6AQ9H0K4 717 aa9.18□□□□□ -0.94
TOPBP1-203ENST00000503464 ZNF219Q9P2Y4 722 aaPredicted RBP9.18□□□□□ -0.94
TOPBP1-203ENST00000503464 U2SURPO15042 1029 aaKnown RBP9.17□□□□□ -0.94
TOPBP1-203ENST00000503464 RUNDC1Q96C34 613 aa9.17□□□□□ -0.94
TOPBP1-203ENST00000503464 SALL2Q9Y467 1007 aaPredicted RBP9.17□□□□□ -0.94
TOPBP1-203ENST00000503464 COL16A1Q07092 1604 aaPredicted RBP9.16□□□□□ -0.94
TOPBP1-203ENST00000503464 COL22A1Q8NFW1 1626 aaPredicted RBP9.16□□□□□ -0.94
TOPBP1-203ENST00000503464 GCP02774 474 aa9.16□□□□□ -0.94
TOPBP1-203ENST00000503464 HOXC9P31274 260 aa9.16□□□□□ -0.94
TOPBP1-203ENST00000503464 CDCA7LQ96GN5 454 aa9.16□□□□□ -0.94
TOPBP1-203ENST00000503464 PHLPP1O60346 1717 aa9.16□□□□□ -0.94
TOPBP1-203ENST00000503464 FAM208AQ9UK61 1670 aaKnown RBP9.16□□□□□ -0.94
TOPBP1-203ENST00000503464 ABCC6O95255 1503 aa9.15□□□□□ -0.94
TOPBP1-203ENST00000503464 ARHGEF10O15013 1369 aa9.15□□□□□ -0.94
TOPBP1-203ENST00000503464 ARHGEF25Q86VW2 580 aa9.15□□□□□ -0.94
TOPBP1-203ENST00000503464 AEBP1Q8IUX7 1158 aa9.15□□□□□ -0.94
TOPBP1-203ENST00000503464 TCP11L2Q8N4U5 519 aa9.15□□□□□ -0.94
TOPBP1-203ENST00000503464 NUDCQ9Y266 331 aa9.15□□□□□ -0.94
TOPBP1-203ENST00000503464 NCAPD2Q15021 1401 aa9.14□□□□□ -0.95
TOPBP1-203ENST00000503464 KDRP35968 1356 aa9.14□□□□□ -0.95
TOPBP1-203ENST00000503464 IGSF1Q8N6C5 1336 aa9.14□□□□□ -0.95
TOPBP1-203ENST00000503464 HMOX1P09601 288 aa9.14□□□□□ -0.95
TOPBP1-203ENST00000503464 PRKAR2BP31323 418 aa9.14□□□□□ -0.95
TOPBP1-203ENST00000503464 AMPHP49418 695 aa9.14□□□□□ -0.95
TOPBP1-203ENST00000503464 LMOD2Q6P5Q4 547 aa9.14□□□□□ -0.95
TOPBP1-203ENST00000503464 KCNH5Q8NCM2 988 aa9.14□□□□□ -0.95
TOPBP1-203ENST00000503464 PHACTR3Q96KR7 559 aa9.14□□□□□ -0.95
TOPBP1-203ENST00000503464 RRP7AQ9Y3A4 280 aaKnown RBP9.14□□□□□ -0.95
TOPBP1-203ENST00000503464 PLEKHG5O94827 1062 aa9.13□□□□□ -0.95
TOPBP1-203ENST00000503464 FCHSD2O94868 740 aa9.13□□□□□ -0.95
TOPBP1-203ENST00000503464 WWC1Q8IX03 1113 aa9.13□□□□□ -0.95
TOPBP1-203ENST00000503464 CABLES1Q8TDN4 633 aa9.13□□□□□ -0.95
TOPBP1-203ENST00000503464 IP6K1Q92551 441 aa9.13□□□□□ -0.95
TOPBP1-203ENST00000503464 CPDO75976 1380 aa9.12□□□□□ -0.95
TOPBP1-203ENST00000503464 VIRMAQ69YN4 1812 aaKnown RBP9.12□□□□□ -0.95
TOPBP1-203ENST00000503464 TMPOP42166 694 aaKnown RBP9.12□□□□□ -0.95
TOPBP1-203ENST00000503464 PDE3BQ13370 1112 aa9.12□□□□□ -0.95
TOPBP1-203ENST00000503464 TRMT2AQ8IZ69 625 aaKnown RBP9.12□□□□□ -0.95
TOPBP1-203ENST00000503464 EYA1Q99502 592 aa9.12□□□□□ -0.95
TOPBP1-203ENST00000503464 TRIM35Q9UPQ4 493 aa9.12□□□□□ -0.95
TOPBP1-203ENST00000503464 AXIN2Q9Y2T1 843 aa9.12□□□□□ -0.95
TOPBP1-203ENST00000503464 LRRC37A3O60309 1634 aa9.12□□□□□ -0.95
TOPBP1-203ENST00000503464 CCDC27Q2M243 656 aa9.11□□□□□ -0.95
TOPBP1-203ENST00000503464 SULT6B1Q6IMI4 303 aa9.11□□□□□ -0.95
TOPBP1-203ENST00000503464 NGEFQ8N5V2 710 aa9.11□□□□□ -0.95
TOPBP1-203ENST00000503464 KIAA0232Q92628 1395 aa9.11□□□□□ -0.95
TOPBP1-203ENST00000503464 ZC3H6P61129 1189 aaKnown RBP9.1□□□□□ -0.95
TOPBP1-203ENST00000503464 SLFN5Q08AF3 891 aa9.1□□□□□ -0.95
TOPBP1-203ENST00000503464 NEUROD2Q15784 382 aa9.1□□□□□ -0.95
TOPBP1-203ENST00000503464 DUSP27Q5VZP5 1158 aa9.1□□□□□ -0.95
TOPBP1-203ENST00000503464 GTF3C3Q9Y5Q9 886 aa9.1□□□□□ -0.95
TOPBP1-203ENST00000503464 MAPK8IP3Q9UPT6 1336 aa9.09□□□□□ -0.95
TOPBP1-203ENST00000503464 ZBTB7CA1YPR0 619 aa9.09□□□□□ -0.95
TOPBP1-203ENST00000503464 GOLGA2Q08379 1002 aa9.09□□□□□ -0.95
TOPBP1-203ENST00000503464 NFE2L2Q16236 605 aa9.09□□□□□ -0.95
TOPBP1-203ENST00000503464 NBPF6Q5VWK0 638 aa9.09□□□□□ -0.95
TOPBP1-203ENST00000503464 LRRC59Q96AG4 307 aaKnown RBP9.09□□□□□ -0.95
TOPBP1-203ENST00000503464 LTV1Q96GA3 475 aaPredicted RBP9.09□□□□□ -0.95
TOPBP1-203ENST00000503464 NBPF4Q96M43 638 aa9.09□□□□□ -0.95
TOPBP1-203ENST00000503464 PLCH1Q4KWH8 1693 aa9.09□□□□□ -0.95
TOPBP1-203ENST00000503464 PKD1L3Q7Z443 1732 aa9.08□□□□□ -0.96
TOPBP1-203ENST00000503464 ERBB3P21860 1342 aa9.08□□□□□ -0.96
TOPBP1-203ENST00000503464 RNF123Q5XPI4 1314 aa9.08□□□□□ -0.96
TOPBP1-203ENST00000503464 CHRNA2Q15822 529 aa9.08□□□□□ -0.96
TOPBP1-203ENST00000503464 USHBP1Q8N6Y0 703 aa9.08□□□□□ -0.96
TOPBP1-203ENST00000503464 ANKRD24Q8TF21 1146 aa9.08□□□□□ -0.96
TOPBP1-203ENST00000503464 COL14A1Q05707 1796 aaKnown RBP9.08□□□□□ -0.96
TOPBP1-203ENST00000503464 NRAPQ86VF7 1730 aa9.08□□□□□ -0.96
TOPBP1-203ENST00000503464 SHANK3Q9BYB0 1731 aa9.08□□□□□ -0.96
TOPBP1-203ENST00000503464 COL5A2P05997 1499 aaPredicted RBP9.08□□□□□ -0.96
TOPBP1-203ENST00000503464 ADAMTS7Q9UKP4 1686 aa9.07□□□□□ -0.96
TOPBP1-203ENST00000503464 RIPK4P57078 832 aa9.07□□□□□ -0.96
TOPBP1-203ENST00000503464 WDR63Q8IWG1 891 aa9.07□□□□□ -0.96
TOPBP1-203ENST00000503464 PNNQ9H307 717 aaKnown RBP9.07□□□□□ -0.96
TOPBP1-203ENST00000503464 SUPT16HQ9Y5B9 1047 aaKnown RBP9.07□□□□□ -0.96
TOPBP1-203ENST00000503464 WNK3Q9BYP7 1800 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms