RNA–Protein interactions for RNA: ENST00000503393.6

SH3BP2-207, Transcript of SH3 domain binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene SH3BP2, Length 9,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BP2-207ENST00000503393 ANKRD50Q9ULJ7 1429 aa18.45■□□□□ 0.54
SH3BP2-207ENST00000503393 CHD1LQ86WJ1 897 aa18.45■□□□□ 0.54
SH3BP2-207ENST00000503393 NOB1Q9ULX3 412 aaKnown RBP18.45■□□□□ 0.54
SH3BP2-207ENST00000503393 PSME1Q06323 249 aa18.45■□□□□ 0.54
SH3BP2-207ENST00000503393 FAM107BQ9H098 131 aa18.45■□□□□ 0.54
SH3BP2-207ENST00000503393 DYNC1I1O14576 645 aa18.44■□□□□ 0.54
SH3BP2-207ENST00000503393 PNISRQ8TF01 805 aaKnown RBP18.44■□□□□ 0.54
SH3BP2-207ENST00000503393 UPF3BQ9BZI7 483 aaKnown RBP18.44■□□□□ 0.54
SH3BP2-207ENST00000503393 FAM193AP78312 1265 aa18.44■□□□□ 0.54
SH3BP2-207ENST00000503393 MAP9Q49MG5 647 aa18.44■□□□□ 0.54
SH3BP2-207ENST00000503393 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.44■□□□□ 0.548e-7■■■■■ 120.2
SH3BP2-207ENST00000503393 SRCIN1Q9C0H9 1055 aa18.44■□□□□ 0.54
SH3BP2-207ENST00000503393 AIMP1Q12904 312 aaKnown RBP18.44■□□□□ 0.54
SH3BP2-207ENST00000503393 SMTNL1A8MU46 457 aa18.44■□□□□ 0.54
SH3BP2-207ENST00000503393 BCAR3O75815 825 aa18.44■□□□□ 0.54
SH3BP2-207ENST00000503393 MCM5P33992 734 aa18.44■□□□□ 0.54
SH3BP2-207ENST00000503393 MVPQ14764 893 aaKnown RBP18.44■□□□□ 0.54
SH3BP2-207ENST00000503393 GGNBP2Q9H3C7 697 aa18.44■□□□□ 0.54
SH3BP2-207ENST00000503393 SYCP1Q15431 976 aa18.43■□□□□ 0.54
SH3BP2-207ENST00000503393 CCAR1Q8IX12 1150 aaKnown RBP18.43■□□□□ 0.54
SH3BP2-207ENST00000503393 SHTN1A0MZ66 631 aa18.43■□□□□ 0.54
SH3BP2-207ENST00000503393 DDX11Q96FC9 970 aa18.43■□□□□ 0.54
SH3BP2-207ENST00000503393 ZMYND15Q9H091 742 aa18.43■□□□□ 0.54
SH3BP2-207ENST00000503393 C1orf115Q9H7X2 142 aa18.43■□□□□ 0.54
SH3BP2-207ENST00000503393 WDR97A6NE52 1622 aa18.43■□□□□ 0.54
SH3BP2-207ENST00000503393 ANKRD18AQ8IVF6 992 aa18.43■□□□□ 0.54
SH3BP2-207ENST00000503393 CDK5RAP3Q96JB5 506 aa18.43■□□□□ 0.54
SH3BP2-207ENST00000503393 TBC1D2BQ9UPU7 963 aa18.43■□□□□ 0.54
SH3BP2-207ENST00000503393 SFPQP23246 707 aaKnown RBP eCLIP18.42■□□□□ 0.54
SH3BP2-207ENST00000503393 EXOSC9Q06265 439 aaKnown RBP18.42■□□□□ 0.54
SH3BP2-207ENST00000503393 ATF7IPQ6VMQ6 1270 aa18.42■□□□□ 0.54
SH3BP2-207ENST00000503393 MCM3P25205 808 aa18.42■□□□□ 0.54
SH3BP2-207ENST00000503393 TWISTNBQ3B726 338 aaPredicted RBP18.42■□□□□ 0.54
SH3BP2-207ENST00000503393 ATP2B1P20020 1258 aa18.41■□□□□ 0.54
SH3BP2-207ENST00000503393 ARHGAP29Q52LW3 1261 aa18.41■□□□□ 0.54
SH3BP2-207ENST00000503393 EPB41L2O43491 1005 aaKnown RBP18.4■□□□□ 0.54
SH3BP2-207ENST00000503393 TAX1BP1Q86VP1 789 aa18.4■□□□□ 0.54
SH3BP2-207ENST00000503393 CCDC183Q5T5S1 534 aa18.4■□□□□ 0.54
SH3BP2-207ENST00000503393 ZSCAN12O43309 604 aa18.4■□□□□ 0.54
SH3BP2-207ENST00000503393 WDR63Q8IWG1 891 aa18.39■□□□□ 0.54
SH3BP2-207ENST00000503393 RAPGEF4Q8WZA2 1011 aa18.39■□□□□ 0.54
SH3BP2-207ENST00000503393 CCT4P50991 539 aaKnown RBP18.39■□□□□ 0.53
SH3BP2-207ENST00000503393 CCDC148Q8NFR7 591 aa18.39■□□□□ 0.53
SH3BP2-207ENST00000503393 PTPRGP23470 1445 aa18.39■□□□□ 0.53
SH3BP2-207ENST00000503393 XPCQ01831 940 aaPredicted RBP18.38■□□□□ 0.53
SH3BP2-207ENST00000503393 GAS2L2Q8NHY3 880 aa18.38■□□□□ 0.53
SH3BP2-207ENST00000503393 TRIM22Q8IYM9 498 aa18.38■□□□□ 0.53
SH3BP2-207ENST00000503393 NCOA2Q15596 1464 aa18.38■□□□□ 0.53
SH3BP2-207ENST00000503393 PPP6R1Q9UPN7 881 aa18.38■□□□□ 0.53
SH3BP2-207ENST00000503393 EZRP15311 586 aaKnown RBP18.38■□□□□ 0.53
SH3BP2-207ENST00000503393 SYTL4Q96C24 671 aaPredicted RBP18.38■□□□□ 0.53
SH3BP2-207ENST00000503393 DNAJC2Q99543 621 aaKnown RBP18.38■□□□□ 0.53
SH3BP2-207ENST00000503393 ZSCAN31Q96LW9 406 aaPredicted RBP18.37■□□□□ 0.53
SH3BP2-207ENST00000503393 PRKAR2BP31323 418 aa18.37■□□□□ 0.53
SH3BP2-207ENST00000503393 CFAP100Q494V2 611 aa18.37■□□□□ 0.53
SH3BP2-207ENST00000503393 PPP4R3BQ5MIZ7 849 aa18.37■□□□□ 0.53
SH3BP2-207ENST00000503393 ZHX1Q9UKY1 873 aaPredicted RBP18.37■□□□□ 0.53
SH3BP2-207ENST00000503393 FYB1O15117 783 aa18.37■□□□□ 0.53
SH3BP2-207ENST00000503393 BLOC1S2Q6QNY1 142 aa18.37■□□□□ 0.53
SH3BP2-207ENST00000503393 CABP2Q9NPB3 220 aa18.37■□□□□ 0.53
SH3BP2-207ENST00000503393 KIAA1328Q86T90 577 aa18.36■□□□□ 0.53
SH3BP2-207ENST00000503393 SUPT6HQ7KZ85 1726 aaKnown RBP18.36■□□□□ 0.53
SH3BP2-207ENST00000503393 SLC3A2P08195 630 aaKnown RBP18.36■□□□□ 0.53
SH3BP2-207ENST00000503393 STK3Q13188 491 aa18.36■□□□□ 0.53
SH3BP2-207ENST00000503393 PLEKHH2Q8IVE3 1493 aa18.36■□□□□ 0.53
SH3BP2-207ENST00000503393 RBM33Q96EV2 1170 aaKnown RBP18.35■□□□□ 0.53
SH3BP2-207ENST00000503393 TIGD1Q96MW7 591 aa18.35■□□□□ 0.53
SH3BP2-207ENST00000503393 GBP2P32456 591 aaPredicted RBP18.35■□□□□ 0.53
SH3BP2-207ENST00000503393 TSR2Q969E8 191 aaKnown RBP18.35■□□□□ 0.53
SH3BP2-207ENST00000503393 PRIMPOLQ96LW4 560 aa18.35■□□□□ 0.53
SH3BP2-207ENST00000503393 CDKL5O76039 1030 aa18.34■□□□□ 0.53
SH3BP2-207ENST00000503393 JAKMIP3Q5VZ66 844 aa18.34■□□□□ 0.53
SH3BP2-207ENST00000503393 CASQ1P31415 396 aa18.34■□□□□ 0.53
SH3BP2-207ENST00000503393 KIF5CO60282 957 aa18.34■□□□□ 0.53
SH3BP2-207ENST00000503393 IMMTQ16891 758 aaKnown RBP18.34■□□□□ 0.53
SH3BP2-207ENST00000503393 SLC26A8Q96RN1 970 aa18.34■□□□□ 0.53
SH3BP2-207ENST00000503393 ZNF644Q9H582 1327 aaPredicted RBP18.34■□□□□ 0.53
SH3BP2-207ENST00000503393 CASKIN1Q8WXD9 1431 aa18.34■□□□□ 0.53
SH3BP2-207ENST00000503393 PLEKHH1Q9ULM0 1364 aa18.34■□□□□ 0.53
SH3BP2-207ENST00000503393 ANKRD62A6NC57 917 aa18.34■□□□□ 0.53
SH3BP2-207ENST00000503393 FANCD2Q9BXW9 1451 aa18.34■□□□□ 0.53
SH3BP2-207ENST00000503393 NEMFO60524 1076 aa18.33■□□□□ 0.53
SH3BP2-207ENST00000503393 MICALCLQ6ZW33 695 aa18.33■□□□□ 0.53
SH3BP2-207ENST00000503393 KDM4AO75164 1064 aa18.33■□□□□ 0.53
SH3BP2-207ENST00000503393 SLC4A2P04920 1241 aa18.33■□□□□ 0.53
SH3BP2-207ENST00000503393 TNNT1P13805 278 aa18.33■□□□□ 0.53
SH3BP2-207ENST00000503393 C16orf45Q96MC5 204 aaPredicted RBP18.33■□□□□ 0.52
SH3BP2-207ENST00000503393 GAPVD1Q14C86 1478 aa18.33■□□□□ 0.52
SH3BP2-207ENST00000503393 KRT32Q14532 448 aa18.33■□□□□ 0.52
SH3BP2-207ENST00000503393 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.33■□□□□ 0.527e-9■■■□□ 15.3
SH3BP2-207ENST00000503393 PDRG1Q9NUG6 133 aa18.32■□□□□ 0.52
SH3BP2-207ENST00000503393 ATAD2BQ9ULI0 1458 aa18.32■□□□□ 0.52
SH3BP2-207ENST00000503393 ERICH3Q5RHP9 1530 aa18.32■□□□□ 0.52
SH3BP2-207ENST00000503393 ZNF428Q96B54 188 aa18.32■□□□□ 0.52
SH3BP2-207ENST00000503393 ZNF397Q8NF99 534 aaPredicted RBP18.32■□□□□ 0.52
SH3BP2-207ENST00000503393 SCAND2PQ9GZW5 306 aaPredicted RBP18.32■□□□□ 0.52
SH3BP2-207ENST00000503393 POLR3GO15318 223 aaPredicted RBP18.31■□□□□ 0.52
SH3BP2-207ENST00000503393 KRT18P05783 430 aaKnown RBP18.31■□□□□ 0.52
SH3BP2-207ENST00000503393 ANO10Q9NW15 660 aa18.31■□□□□ 0.52
SH3BP2-207ENST00000503393 CLIP2Q9UDT6 1046 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms