RNA–Protein interactions for RNA: ENST00000503078.5

DDX41-202, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 2,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-202ENST00000503078 MRPL50Q8N5N7 158 aaKnown RBP30.62■■■□□ 2.49
DDX41-202ENST00000503078 TNPO1Q92973 898 aaKnown RBP30.62■■■□□ 2.49
DDX41-202ENST00000503078 CABP1Q9NZU7 370 aa30.62■■■□□ 2.49
DDX41-202ENST00000503078 VAMP4O75379 141 aa30.61■■■□□ 2.49
DDX41-202ENST00000503078 ARHGEF40Q8TER5 1519 aa30.61■■■□□ 2.49
DDX41-202ENST00000503078 KIF2CQ99661 725 aa30.61■■■□□ 2.49
DDX41-202ENST00000503078 NFE2L2Q16236 605 aa30.59■■■□□ 2.49
DDX41-202ENST00000503078 CALD1Q05682 793 aaKnown RBP30.59■■■□□ 2.49
DDX41-202ENST00000503078 GRPEL1Q9HAV7 217 aa30.59■■■□□ 2.49
DDX41-202ENST00000503078 GBP4Q96PP9 640 aa30.58■■■□□ 2.49
DDX41-202ENST00000503078 POLKQ9UBT6 870 aa30.58■■■□□ 2.49
DDX41-202ENST00000503078 AGLP35573 1532 aa30.58■■■□□ 2.49
DDX41-202ENST00000503078 RAB3GAP1Q15042 981 aa30.58■■■□□ 2.49
DDX41-202ENST00000503078 C1orf115Q9H7X2 142 aa30.57■■■□□ 2.48
DDX41-202ENST00000503078 CLCN1P35523 988 aa30.56■■■□□ 2.48
DDX41-202ENST00000503078 PHACTR3Q96KR7 559 aa30.56■■■□□ 2.48
DDX41-202ENST00000503078 ALKQ9UM73 1620 aa30.55■■■□□ 2.48
DDX41-202ENST00000503078 GNAI1P63096 354 aa30.55■■■□□ 2.48
DDX41-202ENST00000503078 TBC1D9Q6ZT07 1266 aa30.55■■■□□ 2.48
DDX41-202ENST00000503078 IFT57Q9NWB7 429 aa30.54■■■□□ 2.48
DDX41-202ENST00000503078 TSPYL6Q8N831 410 aa30.54■■■□□ 2.48
DDX41-202ENST00000503078 ABCC4O15439 1325 aa30.54■■■□□ 2.48
DDX41-202ENST00000503078 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.53■■■□□ 2.48
DDX41-202ENST00000503078 THUMPD2Q9BTF0 503 aaKnown RBP30.53■■■□□ 2.48
DDX41-202ENST00000503078 PTMSP20962 102 aa30.52■■■□□ 2.48
DDX41-202ENST00000503078 FBXO31Q5XUX0 539 aaPredicted RBP30.52■■■□□ 2.48
DDX41-202ENST00000503078 HMOX1P09601 288 aa30.52■■■□□ 2.48
DDX41-202ENST00000503078 FBLN1P23142 703 aa30.52■■■□□ 2.48
DDX41-202ENST00000503078 SKOR2Q2VWA4 1001 aaPredicted RBP30.52■■■□□ 2.48
DDX41-202ENST00000503078 SIRT2Q8IXJ6 389 aa30.52■■■□□ 2.48
DDX41-202ENST00000503078 K7ELQ4 463 aaPredicted RBP30.51■■■□□ 2.48
DDX41-202ENST00000503078 PPP6R1Q9UPN7 881 aa30.51■■■□□ 2.48
DDX41-202ENST00000503078 ATP7BP35670 1465 aa30.51■■■□□ 2.47
DDX41-202ENST00000503078 CD2BP2O95400 341 aaKnown RBP30.5■■■□□ 2.47
DDX41-202ENST00000503078 HSP90AA1P07900 732 aaKnown RBP30.5■■■□□ 2.47
DDX41-202ENST00000503078 ZNF853P0CG23 659 aa30.5■■■□□ 2.47
DDX41-202ENST00000503078 MAP2P11137 1827 aaKnown RBP30.5■■■□□ 2.47
DDX41-202ENST00000503078 MBIPQ9NS73 344 aa30.49■■■□□ 2.47
DDX41-202ENST00000503078 ELL2O00472 640 aaPredicted RBP30.47■■■□□ 2.47
DDX41-202ENST00000503078 CDC45O75419 566 aa30.46■■■□□ 2.47
DDX41-202ENST00000503078 KIF13AQ9H1H9 1805 aa30.46■■■□□ 2.47
DDX41-202ENST00000503078 TWISTNBQ3B726 338 aaPredicted RBP30.46■■■□□ 2.47
DDX41-202ENST00000503078 IL13P35225 146 aa30.44■■■□□ 2.46
DDX41-202ENST00000503078 RBM42Q9BTD8 480 aaKnown RBP30.44■■■□□ 2.46
DDX41-202ENST00000503078 API5Q9BZZ5 524 aaKnown RBP30.44■■■□□ 2.46
DDX41-202ENST00000503078 FOXD4L1Q9NU39 408 aa30.44■■■□□ 2.46
DDX41-202ENST00000503078 UBE2Q2Q8WVN8 375 aa30.43■■■□□ 2.46
DDX41-202ENST00000503078 EMILIN1Q9Y6C2 1016 aa30.43■■■□□ 2.46
DDX41-202ENST00000503078 GAS2L3Q86XJ1 694 aa30.42■■■□□ 2.46
DDX41-202ENST00000503078 CFAP44Q96MT7 982 aa30.42■■■□□ 2.46
DDX41-202ENST00000503078 DLC1Q96QB1 1528 aa30.42■■■□□ 2.46
DDX41-202ENST00000503078 LMOD3Q0VAK6 560 aa30.41■■■□□ 2.46
DDX41-202ENST00000503078 CDK12Q9NYV4 1490 aaPredicted RBP30.41■■■□□ 2.46
DDX41-202ENST00000503078 KIF24Q5T7B8 1368 aa30.41■■■□□ 2.46
DDX41-202ENST00000503078 C8orf58Q8NAV2 365 aa30.4■■■□□ 2.46
DDX41-202ENST00000503078 GAS2L2Q8NHY3 880 aa30.4■■■□□ 2.46
DDX41-202ENST00000503078 GSPT1P15170 499 aaKnown RBP30.39■■■□□ 2.45
DDX41-202ENST00000503078 CLEC17AQ6ZS10 378 aa30.39■■■□□ 2.45
DDX41-202ENST00000503078 NAP1L5Q96NT1 182 aaPredicted RBP30.39■■■□□ 2.45
DDX41-202ENST00000503078 DLG5Q8TDM6 1919 aa30.38■■■□□ 2.45
DDX41-202ENST00000503078 ESPNB1AK53 854 aa30.38■■■□□ 2.45
DDX41-202ENST00000503078 WAPLQ7Z5K2 1190 aa30.38■■■□□ 2.45
DDX41-202ENST00000503078 SPATA31D1Q6ZQQ2 1576 aa30.38■■■□□ 2.45
DDX41-202ENST00000503078 SSFA2P28290 1259 aa30.37■■■□□ 2.45
DDX41-202ENST00000503078 PLEKHM2Q8IWE5 1019 aa30.37■■■□□ 2.45
DDX41-202ENST00000503078 EDC4Q6P2E9 1401 aaKnown RBP30.37■■■□□ 2.45
DDX41-202ENST00000503078 STAG3Q9UJ98 1225 aa30.36■■■□□ 2.45
DDX41-202ENST00000503078 KNDC1Q76NI1 1749 aa30.36■■■□□ 2.45
DDX41-202ENST00000503078 GOLGA6L22H0YM25 854 aa30.36■■■□□ 2.45
DDX41-202ENST00000503078 DCTPP1Q9H773 170 aa30.36■■■□□ 2.45
DDX41-202ENST00000503078 RIMS2Q9UQ26 1411 aa30.36■■■□□ 2.45
DDX41-202ENST00000503078 AATKQ6ZMQ8 1374 aa30.36■■■□□ 2.45
DDX41-202ENST00000503078 CPSF1Q10570 1443 aaKnown RBP30.35■■■□□ 2.45
DDX41-202ENST00000503078 TRIM44Q96DX7 344 aaPredicted RBP30.34■■■□□ 2.45
DDX41-202ENST00000503078 RABEP1Q15276 862 aa30.34■■■□□ 2.45
DDX41-202ENST00000503078 NME9Q86XW9 330 aa30.33■■■□□ 2.45
DDX41-202ENST00000503078 TTC22Q5TAA0 569 aa30.32■■■□□ 2.44
DDX41-202ENST00000503078 ERBB4Q15303 1308 aa30.32■■■□□ 2.44
DDX41-202ENST00000503078 A2ML1A8K2U0 1454 aa30.31■■■□□ 2.44
DDX41-202ENST00000503078 MLECQ14165 292 aa30.3■■■□□ 2.44
DDX41-202ENST00000503078 FAM83GA6ND36 823 aa30.3■■■□□ 2.44
DDX41-202ENST00000503078 BAG4O95429 457 aaKnown RBP30.3■■■□□ 2.44
DDX41-202ENST00000503078 INTS3Q68E01 1043 aaKnown RBP30.29■■■□□ 2.44
DDX41-202ENST00000503078 KLHL40Q2TBA0 621 aa30.29■■■□□ 2.44
DDX41-202ENST00000503078 ZRANB1Q9UGI0 708 aa30.29■■■□□ 2.44
DDX41-202ENST00000503078 IBTKQ9P2D0 1353 aaPredicted RBP30.28■■■□□ 2.44
DDX41-202ENST00000503078 SETD1AO15047 1707 aaKnown RBP30.28■■■□□ 2.44
DDX41-202ENST00000503078 ANKRD44Q8N8A2 993 aa30.27■■■□□ 2.44
DDX41-202ENST00000503078 USP26Q9BXU7 913 aa30.27■■■□□ 2.44
DDX41-202ENST00000503078 WASLO00401 505 aaPredicted RBP30.26■■■□□ 2.43
DDX41-202ENST00000503078 COG3Q96JB2 828 aa30.26■■■□□ 2.43
DDX41-202ENST00000503078 DCTN1Q14203 1278 aa30.26■■■□□ 2.43
DDX41-202ENST00000503078 DDX49Q9Y6V7 483 aaKnown RBP30.26■■■□□ 2.43
DDX41-202ENST00000503078 ATP10DQ9P241 1426 aa30.25■■■□□ 2.43
DDX41-202ENST00000503078 C16orf71Q8IYS4 520 aaPredicted RBP30.25■■■□□ 2.43
DDX41-202ENST00000503078 NUCB2P80303 420 aa30.24■■■□□ 2.43
DDX41-202ENST00000503078 RRS1Q15050 365 aaKnown RBP30.24■■■□□ 2.43
DDX41-202ENST00000503078 RPAP2Q8IXW5 612 aaPredicted RBP30.24■■■□□ 2.43
DDX41-202ENST00000503078 CCDC173Q0VFZ6 552 aa30.23■■■□□ 2.43
DDX41-202ENST00000503078 HAP1P54257 671 aaPredicted RBP30.22■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms