RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 MARCH10Q8NA82 808 aaPredicted RBP22.85■■□□□ 1.25
HDAC6-236ENST00000498808 BCL9O00512 1426 aa22.84■■□□□ 1.25
HDAC6-236ENST00000498808 TOM1L2Q6ZVM7 507 aa22.84■■□□□ 1.25
HDAC6-236ENST00000498808 ATF5Q9Y2D1 282 aaPredicted RBP22.84■■□□□ 1.25
HDAC6-236ENST00000498808 KIAA1210Q9ULL0 1709 aa22.84■■□□□ 1.25
HDAC6-236ENST00000498808 BRD4O60885 1362 aaPredicted RBP22.84■■□□□ 1.25
HDAC6-236ENST00000498808 AKAP12Q02952 1782 aa22.84■■□□□ 1.25
HDAC6-236ENST00000498808 USP6P35125 1406 aa22.82■■□□□ 1.24
HDAC6-236ENST00000498808 SRPK2P78362 688 aaKnown RBP22.82■■□□□ 1.24
HDAC6-236ENST00000498808 NLRP6P59044 892 aa22.81■■□□□ 1.24
HDAC6-236ENST00000498808 CABP2Q9NPB3 220 aa22.81■■□□□ 1.24
HDAC6-236ENST00000498808 AXIN2Q9Y2T1 843 aa22.81■■□□□ 1.24
HDAC6-236ENST00000498808 WDR17Q8IZU2 1322 aa22.81■■□□□ 1.24
HDAC6-236ENST00000498808 SYT17Q9BSW7 474 aa22.8■■□□□ 1.24
HDAC6-236ENST00000498808 FHDC1Q9C0D6 1143 aaPredicted RBP22.8■■□□□ 1.24
HDAC6-236ENST00000498808 PIK3C2AO00443 1686 aa22.8■■□□□ 1.24
HDAC6-236ENST00000498808 TXNRD1Q16881 649 aa22.79■■□□□ 1.24
HDAC6-236ENST00000498808 NBPF1Q3BBV0 1214 aa22.79■■□□□ 1.24
HDAC6-236ENST00000498808 SLC15A2Q16348 729 aa22.78■■□□□ 1.24
HDAC6-236ENST00000498808 SGIP1Q9BQI5 828 aa22.78■■□□□ 1.24
HDAC6-236ENST00000498808 STK32BQ9NY57 414 aa22.78■■□□□ 1.24
HDAC6-236ENST00000498808 CHD4Q14839 1912 aa22.78■■□□□ 1.24
HDAC6-236ENST00000498808 CPSF1Q10570 1443 aaKnown RBP22.77■■□□□ 1.24
HDAC6-236ENST00000498808 CDCA7Q9BWT1 371 aaPredicted RBP22.77■■□□□ 1.24
HDAC6-236ENST00000498808 RGPD5Q99666 1765 aa22.76■■□□□ 1.23
HDAC6-236ENST00000498808 CABP1Q9NZU7 370 aa22.76■■□□□ 1.23
HDAC6-236ENST00000498808 CENPJQ9HC77 1338 aaPredicted RBP22.76■■□□□ 1.23
HDAC6-236ENST00000498808 MTFR1LQ9H019 292 aa22.75■■□□□ 1.23
HDAC6-236ENST00000498808 SENP3-EIF4A1A0A087X0R7 540 aa22.74■■□□□ 1.23
HDAC6-236ENST00000498808 QRICH2Q9H0J4 1663 aa22.74■■□□□ 1.23
HDAC6-236ENST00000498808 ARHGEF25Q86VW2 580 aa22.73■■□□□ 1.23
HDAC6-236ENST00000498808 CARD10Q9BWT7 1032 aa22.73■■□□□ 1.23
HDAC6-236ENST00000498808 C1QTNF8P60827 252 aa22.71■■□□□ 1.23
HDAC6-236ENST00000498808 NHSQ6T4R5 1651 aa22.71■■□□□ 1.23
HDAC6-236ENST00000498808 PAPPAQ13219 1627 aa22.7■■□□□ 1.22
HDAC6-236ENST00000498808 TRPM1Q7Z4N2 1603 aa22.69■■□□□ 1.22
HDAC6-236ENST00000498808 TNS2Q63HR2 1409 aa22.69■■□□□ 1.22
HDAC6-236ENST00000498808 EXOC5O00471 708 aa22.69■■□□□ 1.22
HDAC6-236ENST00000498808 CSB-PGBD3P0DP91 1061 aa22.68■■□□□ 1.22
HDAC6-236ENST00000498808 MAP3K5Q99683 1374 aa22.67■■□□□ 1.22
HDAC6-236ENST00000498808 ARXQ96QS3 562 aa22.67■■□□□ 1.22
HDAC6-236ENST00000498808 NFAT5O94916 1531 aa22.67■■□□□ 1.22
HDAC6-236ENST00000498808 CCDC7Q96M83 1385 aa22.66■■□□□ 1.22
HDAC6-236ENST00000498808 SOX12O15370 315 aa22.66■■□□□ 1.22
HDAC6-236ENST00000498808 TTC21BQ7Z4L5 1316 aa22.65■■□□□ 1.22
HDAC6-236ENST00000498808 KCNH5Q8NCM2 988 aa22.65■■□□□ 1.22
HDAC6-236ENST00000498808 ACSBG1Q96GR2 724 aa22.64■■□□□ 1.21
HDAC6-236ENST00000498808 ABCC6O95255 1503 aa22.63■■□□□ 1.21
HDAC6-236ENST00000498808 BTAF1O14981 1849 aa22.62■■□□□ 1.21
HDAC6-236ENST00000498808 ZNF827Q17R98 1081 aa22.62■■□□□ 1.21
HDAC6-236ENST00000498808 EVC2Q86UK5 1308 aa22.59■■□□□ 1.21
HDAC6-236ENST00000498808 TTC21AQ8NDW8 1320 aa22.59■■□□□ 1.21
HDAC6-236ENST00000498808 ZNF692Q9BU19 519 aaPredicted RBP22.59■■□□□ 1.21
HDAC6-236ENST00000498808 LRRC4BQ9NT99 713 aa22.58■■□□□ 1.21
HDAC6-236ENST00000498808 GPR162Q16538 588 aa22.57■■□□□ 1.2
HDAC6-236ENST00000498808 ERBB3P21860 1342 aa22.56■■□□□ 1.2
HDAC6-236ENST00000498808 COL24A1Q17RW2 1714 aa22.55■■□□□ 1.2
HDAC6-236ENST00000498808 KAT6BQ8WYB5 2073 aa22.54■■□□□ 1.2
HDAC6-236ENST00000498808 QSER1Q2KHR3 1735 aa22.54■■□□□ 1.2
HDAC6-236ENST00000498808 GIGYF1O75420 1035 aaPredicted RBP22.54■■□□□ 1.2
HDAC6-236ENST00000498808 IL2RBP14784 551 aa22.53■■□□□ 1.2
HDAC6-236ENST00000498808 IFFO2Q5TF58 517 aa22.53■■□□□ 1.2
HDAC6-236ENST00000498808 AKT1S1Q96B36 256 aa22.53■■□□□ 1.2
HDAC6-236ENST00000498808 NLRP2Q9NX02 1062 aa22.53■■□□□ 1.2
HDAC6-236ENST00000498808 SHANK3Q9BYB0 1731 aa22.53■■□□□ 1.2
HDAC6-236ENST00000498808 KTN1Q86UP2 1357 aaKnown RBP22.52■■□□□ 1.2
HDAC6-236ENST00000498808 MON2Q7Z3U7 1717 aa22.52■■□□□ 1.2
HDAC6-236ENST00000498808 KLHL34Q8N239 644 aa22.52■■□□□ 1.2
HDAC6-236ENST00000498808 USP54Q70EL1 1684 aa22.52■■□□□ 1.2
HDAC6-236ENST00000498808 SLC16A10Q8TF71 515 aa22.51■■□□□ 1.19
HDAC6-236ENST00000498808 GOLGB1Q14789 3259 aaKnown RBP22.51■■□□□ 1.19
HDAC6-236ENST00000498808 LTN1O94822 1766 aa22.5■■□□□ 1.19
HDAC6-236ENST00000498808 TUBGCP6Q96RT7 1819 aa22.5■■□□□ 1.19
HDAC6-236ENST00000498808 PNPLA7Q6ZV29 1317 aa22.5■■□□□ 1.19
HDAC6-236ENST00000498808 USP31Q70CQ4 1352 aa22.5■■□□□ 1.19
HDAC6-236ENST00000498808 PELP1Q8IZL8 1130 aaKnown RBP22.49■■□□□ 1.19
HDAC6-236ENST00000498808 POLD1P28340 1107 aa22.48■■□□□ 1.19
HDAC6-236ENST00000498808 NLGN2Q8NFZ4 835 aa22.48■■□□□ 1.19
HDAC6-236ENST00000498808 SLC27A3Q5K4L6 730 aa22.46■■□□□ 1.19
HDAC6-236ENST00000498808 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.46■■□□□ 1.19
HDAC6-236ENST00000498808 ANKRD24Q8TF21 1146 aa22.46■■□□□ 1.19
HDAC6-236ENST00000498808 NME9Q86XW9 330 aa22.45■■□□□ 1.18
HDAC6-236ENST00000498808 L3MBTL2Q969R5 705 aa22.45■■□□□ 1.18
HDAC6-236ENST00000498808 CEP350Q5VT06 3117 aa22.44■■□□□ 1.18
HDAC6-236ENST00000498808 CD163L1Q9NR16 1453 aa22.43■■□□□ 1.18
HDAC6-236ENST00000498808 SBNO2Q9Y2G9 1366 aa22.43■■□□□ 1.18
HDAC6-236ENST00000498808 KCNQ4P56696 695 aa22.43■■□□□ 1.18
HDAC6-236ENST00000498808 YBX3P16989 372 aaKnown RBP eCLIP22.42■■□□□ 1.18
HDAC6-236ENST00000498808 TFCP2L1Q9NZI6 479 aa22.42■■□□□ 1.18
HDAC6-236ENST00000498808 LY75O60449 1722 aa22.41■■□□□ 1.18
HDAC6-236ENST00000498808 ROCK2O75116 1388 aaKnown RBP22.4■■□□□ 1.18
HDAC6-236ENST00000498808 DDX54Q8TDD1 881 aaKnown RBP22.4■■□□□ 1.18
HDAC6-236ENST00000498808 DOT1LQ8TEK3 1739 aa22.39■■□□□ 1.17
HDAC6-236ENST00000498808 NSD2O96028 1365 aa22.38■■□□□ 1.17
HDAC6-236ENST00000498808 ANKRD36BQ8N2N9 1353 aa22.37■■□□□ 1.17
HDAC6-236ENST00000498808 FAM208AQ9UK61 1670 aaKnown RBP22.36■■□□□ 1.17
HDAC6-236ENST00000498808 GRIN3BO60391 1043 aa22.36■■□□□ 1.17
HDAC6-236ENST00000498808 PRIM1P49642 420 aaKnown RBP22.36■■□□□ 1.17
HDAC6-236ENST00000498808 SYTL4Q96C24 671 aaPredicted RBP22.36■■□□□ 1.17
HDAC6-236ENST00000498808 ATP10DQ9P241 1426 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms