RNA–Protein interactions for RNA: ENST00000497567.1

ATP13A3-210, Transcript of ATPase 13A3, humanhuman

TSL 4

Gene ATP13A3, Length 532 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-210ENST00000497567 GIGYF1O75420 1035 aaPredicted RBP12.18□□□□□ -0.46
ATP13A3-210ENST00000497567 NR3C2P08235 984 aa12.18□□□□□ -0.46
ATP13A3-210ENST00000497567 FSHRP23945 695 aa12.18□□□□□ -0.46
ATP13A3-210ENST00000497567 WASF2Q9Y6W5 498 aa12.18□□□□□ -0.46
ATP13A3-210ENST00000497567 HPS1Q92902 700 aa12.17□□□□□ -0.46
ATP13A3-210ENST00000497567 ALG2Q9H553 416 aa12.17□□□□□ -0.46
ATP13A3-210ENST00000497567 CEP126Q9P2H0 1117 aa12.17□□□□□ -0.46
ATP13A3-210ENST00000497567 CDV3Q9UKY7 258 aaKnown RBP12.17□□□□□ -0.46
ATP13A3-210ENST00000497567 ZNF777Q9ULD5 760 aaPredicted RBP12.17□□□□□ -0.46
ATP13A3-210ENST00000497567 ESPNB1AK53 854 aa12.16□□□□□ -0.46
ATP13A3-210ENST00000497567 NNTQ13423 1086 aa12.16□□□□□ -0.46
ATP13A3-210ENST00000497567 INTS6LQ5JSJ4 861 aaKnown RBP12.16□□□□□ -0.46
ATP13A3-210ENST00000497567 RAB15P59190 212 aa12.15□□□□□ -0.46
ATP13A3-210ENST00000497567 SEMA3FQ13275 785 aa12.15□□□□□ -0.46
ATP13A3-210ENST00000497567 NBPF20Q3BBV1 942 aa12.15□□□□□ -0.46
ATP13A3-210ENST00000497567 SOX11P35716 441 aa12.14□□□□□ -0.47
ATP13A3-210ENST00000497567 MCCD1P59942 119 aaPredicted RBP12.14□□□□□ -0.47
ATP13A3-210ENST00000497567 NR5A1Q13285 461 aa12.14□□□□□ -0.47
ATP13A3-210ENST00000497567 HDGFL1Q5TGJ6 251 aa12.14□□□□□ -0.47
ATP13A3-210ENST00000497567 LAPTM4AQ15012 233 aa12.13□□□□□ -0.47
ATP13A3-210ENST00000497567 PKDCCQ504Y2 493 aa12.11□□□□□ -0.47
ATP13A3-210ENST00000497567 ZNF592Q92610 1267 aa12.11□□□□□ -0.47
ATP13A3-210ENST00000497567 GLMNQ92990 594 aa12.11□□□□□ -0.47
ATP13A3-210ENST00000497567 DGAT1O75907 488 aa12.1□□□□□ -0.47
ATP13A3-210ENST00000497567 CCDC116Q8IYX3 515 aa12.1□□□□□ -0.47
ATP13A3-210ENST00000497567 PHTF2Q8N3S3 785 aa12.1□□□□□ -0.47
ATP13A3-210ENST00000497567 ERVH48-1M5A8F1 160 aa12.09□□□□□ -0.47
ATP13A3-210ENST00000497567 PIK3CDO00329 1044 aa12.09□□□□□ -0.47
ATP13A3-210ENST00000497567 TSGA10IPQ3SY00 556 aa12.09□□□□□ -0.47
ATP13A3-210ENST00000497567 PPP1R26Q5T8A7 1209 aaPredicted RBP12.09□□□□□ -0.47
ATP13A3-210ENST00000497567 KLF16Q9BXK1 252 aaPredicted RBP12.09□□□□□ -0.47
ATP13A3-210ENST00000497567 TMPRSS4Q9NRS4 437 aa12.09□□□□□ -0.47
ATP13A3-210ENST00000497567 ARID3CA6NKF2 412 aa12.08□□□□□ -0.48
ATP13A3-210ENST00000497567 AVPP01185 164 aa12.08□□□□□ -0.48
ATP13A3-210ENST00000497567 ERICH6Q7L0X2 663 aa12.08□□□□□ -0.48
ATP13A3-210ENST00000497567 CCDC85AQ96PX6 553 aaPredicted RBP12.08□□□□□ -0.48
ATP13A3-210ENST00000497567 SEPT12Q8IYM1 358 aa12.07□□□□□ -0.48
ATP13A3-210ENST00000497567 TIMP2P16035 220 aa12.06□□□□□ -0.48
ATP13A3-210ENST00000497567 WDR4P57081 412 aaKnown RBP12.06□□□□□ -0.48
ATP13A3-210ENST00000497567 SLFNL1Q499Z3 407 aa12.06□□□□□ -0.48
ATP13A3-210ENST00000497567 RNF135Q8IUD6 432 aa12.06□□□□□ -0.48
ATP13A3-210ENST00000497567 ITPKCQ96DU7 683 aa12.06□□□□□ -0.48
ATP13A3-210ENST00000497567 CALR3Q96L12 384 aaKnown RBP12.06□□□□□ -0.48
ATP13A3-210ENST00000497567 UCN2Q96RP3 112 aa12.06□□□□□ -0.48
ATP13A3-210ENST00000497567 ZFAND3Q9H8U3 227 aa12.06□□□□□ -0.48
ATP13A3-210ENST00000497567 ZIC2O95409 532 aaPredicted RBP12.05□□□□□ -0.48
ATP13A3-210ENST00000497567 MYT1Q01538 1121 aa12.05□□□□□ -0.48
ATP13A3-210ENST00000497567 LCE2BO14633 110 aa12.04□□□□□ -0.48
ATP13A3-210ENST00000497567 DHX9Q08211 1270 aaKnown RBP12.04□□□□□ -0.48
ATP13A3-210ENST00000497567 RNF20Q5VTR2 975 aa12.04□□□□□ -0.48
ATP13A3-210ENST00000497567 CDCA7Q9BWT1 371 aaPredicted RBP12.04□□□□□ -0.48
ATP13A3-210ENST00000497567 PCDHB11Q9Y5F2 797 aa12.04□□□□□ -0.48
ATP13A3-210ENST00000497567 ST8SIA5O15466 376 aa12.03□□□□□ -0.48
ATP13A3-210ENST00000497567 Q6ZNB5 142 aa12.03□□□□□ -0.48
ATP13A3-210ENST00000497567 ZNF784Q8NCA9 323 aaPredicted RBP12.03□□□□□ -0.48
ATP13A3-210ENST00000497567 EMILIN1Q9Y6C2 1016 aa12.03□□□□□ -0.48
ATP13A3-210ENST00000497567 C1orf115Q9H7X2 142 aa12.02□□□□□ -0.49
ATP13A3-210ENST00000497567 CHIC2Q9UKJ5 165 aa12.02□□□□□ -0.49
ATP13A3-210ENST00000497567 SUPT5HO00267 1087 aaKnown RBP12.01□□□□□ -0.49
ATP13A3-210ENST00000497567 CAPN5O15484 640 aaPredicted RBP12.01□□□□□ -0.49
ATP13A3-210ENST00000497567 TBC1D9Q6ZT07 1266 aa12.01□□□□□ -0.49
ATP13A3-210ENST00000497567 LILRA1O75019 489 aa12□□□□□ -0.49
ATP13A3-210ENST00000497567 SKIP12755 728 aa12□□□□□ -0.49
ATP13A3-210ENST00000497567 SCTRP47872 440 aa12□□□□□ -0.49
ATP13A3-210ENST00000497567 CBLBQ13191 982 aa12□□□□□ -0.49
ATP13A3-210ENST00000497567 TRAF7Q6Q0C0 670 aa12□□□□□ -0.49
ATP13A3-210ENST00000497567 PLPP7Q8NBV4 271 aa12□□□□□ -0.49
ATP13A3-210ENST00000497567 CYLDQ9NQC7 956 aa12□□□□□ -0.49
ATP13A3-210ENST00000497567 AAASQ9NRG9 546 aa12□□□□□ -0.49
ATP13A3-210ENST00000497567 PGPEP1Q9NXJ5 209 aa12□□□□□ -0.49
ATP13A3-210ENST00000497567 ADD1P35611 737 aaKnown RBP11.99□□□□□ -0.49
ATP13A3-210ENST00000497567 SMCPP49901 116 aaPredicted RBP11.99□□□□□ -0.49
ATP13A3-210ENST00000497567 DOLKQ9UPQ8 538 aa11.99□□□□□ -0.49
ATP13A3-210ENST00000497567 AXIN1O15169 862 aa11.98□□□□□ -0.49
ATP13A3-210ENST00000497567 CTC1Q2NKJ3 1217 aa11.98□□□□□ -0.49
ATP13A3-210ENST00000497567 CRIPAKQ8N1N5 446 aa11.98□□□□□ -0.49
ATP13A3-210ENST00000497567 DACH1Q9UI36 760 aa11.98□□□□□ -0.49
ATP13A3-210ENST00000497567 OXLD1Q5BKU9 147 aa11.97□□□□□ -0.49
ATP13A3-210ENST00000497567 CCDC125Q86Z20 511 aa11.97□□□□□ -0.49
ATP13A3-210ENST00000497567 TFIP11Q9UBB9 837 aaKnown RBP11.97□□□□□ -0.49
ATP13A3-210ENST00000497567 ERVK-9P63128 1117 aa11.96□□□□□ -0.49
ATP13A3-210ENST00000497567 NFATC2IPQ8NCF5 419 aa11.96□□□□□ -0.49
ATP13A3-210ENST00000497567 DEPDC4Q8N2C3 294 aa11.95□□□□□ -0.5
ATP13A3-210ENST00000497567 PPP1R12CQ9BZL4 782 aa11.95□□□□□ -0.5
ATP13A3-210ENST00000497567 PALM3A6NDB9 673 aaPredicted RBP11.94□□□□□ -0.5
ATP13A3-210ENST00000497567 USP17L5A8MUK1 530 aa11.94□□□□□ -0.5
ATP13A3-210ENST00000497567 ATP9BO43861 1147 aa11.94□□□□□ -0.5
ATP13A3-210ENST00000497567 BMP1P13497 986 aa11.94□□□□□ -0.5
ATP13A3-210ENST00000497567 MAP7D1Q3KQU3 841 aa11.94□□□□□ -0.5
ATP13A3-210ENST00000497567 CC2D2BQ6DHV5 1058 aa11.94□□□□□ -0.5
ATP13A3-210ENST00000497567 Q6ZVU0 165 aa11.94□□□□□ -0.5
ATP13A3-210ENST00000497567 TRIM46Q7Z4K8 759 aa11.93□□□□□ -0.5
ATP13A3-210ENST00000497567 MEIOBQ8N635 442 aa11.93□□□□□ -0.5
ATP13A3-210ENST00000497567 AGBL1Q96MI9 1066 aa11.93□□□□□ -0.5
ATP13A3-210ENST00000497567 NCOA4Q13772 614 aa11.92□□□□□ -0.5
ATP13A3-210ENST00000497567 OSBPL3Q9H4L5 887 aa11.92□□□□□ -0.5
ATP13A3-210ENST00000497567 MAFBQ9Y5Q3 323 aaPredicted RBP11.92□□□□□ -0.5
ATP13A3-210ENST00000497567 USP17L3A6NCW0 530 aa11.91□□□□□ -0.5
ATP13A3-210ENST00000497567 USP17L4A6NCW7 530 aa11.91□□□□□ -0.5
ATP13A3-210ENST00000497567 USP17L2Q6R6M4 530 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms