RNA–Protein interactions for RNA: ENST00000494795.1

SAMM50-206, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 3,248 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-206ENST00000494795 MYH16Q9H6N6 1097 aa13.43□□□□□ -0.26
SAMM50-206ENST00000494795 SULT6B1Q6IMI4 303 aa13.43□□□□□ -0.26
SAMM50-206ENST00000494795 ZNF692Q9BU19 519 aaPredicted RBP13.43□□□□□ -0.26
SAMM50-206ENST00000494795 ITSN1Q15811 1721 aa13.43□□□□□ -0.26
SAMM50-206ENST00000494795 KRT24Q2M2I5 525 aa13.43□□□□□ -0.26
SAMM50-206ENST00000494795 SMC4Q9NTJ3 1288 aa13.43□□□□□ -0.26
SAMM50-206ENST00000494795 FOXO3O43524 673 aa13.42□□□□□ -0.26
SAMM50-206ENST00000494795 PEAK1Q9H792 1746 aa13.42□□□□□ -0.26
SAMM50-206ENST00000494795 PLCB2Q00722 1185 aa13.41□□□□□ -0.26
SAMM50-206ENST00000494795 NOB1Q9ULX3 412 aaKnown RBP13.41□□□□□ -0.26
SAMM50-206ENST00000494795 TRIM27P14373 513 aa13.41□□□□□ -0.26
SAMM50-206ENST00000494795 NFE2L2Q16236 605 aa13.41□□□□□ -0.26
SAMM50-206ENST00000494795 BACH2Q9BYV9 841 aa13.41□□□□□ -0.26
SAMM50-206ENST00000494795 DIP2AQ14689 1571 aa13.41□□□□□ -0.26
SAMM50-206ENST00000494795 CEP170BQ9Y4F5 1589 aaPredicted RBP13.41□□□□□ -0.26
SAMM50-206ENST00000494795 TOPAZ1Q8N9V7 1692 aa13.41□□□□□ -0.26
SAMM50-206ENST00000494795 NRKQ7Z2Y5 1582 aa13.41□□□□□ -0.26
SAMM50-206ENST00000494795 OVOS2A0A0J9YW53 1432 aa13.41□□□□□ -0.26
SAMM50-206ENST00000494795 OVOS2Q6IE36 1432 aa13.41□□□□□ -0.26
SAMM50-206ENST00000494795 MAP3K19Q56UN5 1328 aa13.41□□□□□ -0.26
SAMM50-206ENST00000494795 AATKQ6ZMQ8 1374 aa13.4□□□□□ -0.26
SAMM50-206ENST00000494795 XPCQ01831 940 aaPredicted RBP13.4□□□□□ -0.26
SAMM50-206ENST00000494795 PDE3AQ14432 1141 aa13.4□□□□□ -0.26
SAMM50-206ENST00000494795 SSH2Q76I76 1423 aa13.4□□□□□ -0.26
SAMM50-206ENST00000494795 CENPQQ7L2Z9 268 aaPredicted RBP13.4□□□□□ -0.26
SAMM50-206ENST00000494795 MCM10Q7L590 875 aa13.4□□□□□ -0.26
SAMM50-206ENST00000494795 CDK12Q9NYV4 1490 aaPredicted RBP13.4□□□□□ -0.26
SAMM50-206ENST00000494795 TPRNQ4KMQ1 711 aa13.39□□□□□ -0.27
SAMM50-206ENST00000494795 MBIPQ9NS73 344 aa13.39□□□□□ -0.27
SAMM50-206ENST00000494795 MIS18AQ9NYP9 233 aa13.39□□□□□ -0.27
SAMM50-206ENST00000494795 C14orf37Q86TY3 774 aa13.38□□□□□ -0.27
SAMM50-206ENST00000494795 NLRP6P59044 892 aa13.38□□□□□ -0.27
SAMM50-206ENST00000494795 C8orf58Q8NAV2 365 aa13.38□□□□□ -0.27
SAMM50-206ENST00000494795 ANP32EQ9BTT0 268 aa13.37□□□□□ -0.27
SAMM50-206ENST00000494795 PTCH1Q13635 1447 aa13.37□□□□□ -0.27
SAMM50-206ENST00000494795 LTV1Q96GA3 475 aaPredicted RBP13.37□□□□□ -0.27
SAMM50-206ENST00000494795 ANKLE2Q86XL3 938 aa13.37□□□□□ -0.27
SAMM50-206ENST00000494795 DLG5Q8TDM6 1919 aa13.37□□□□□ -0.27
SAMM50-206ENST00000494795 XRN1Q8IZH2 1706 aaKnown RBP13.36□□□□□ -0.27
SAMM50-206ENST00000494795 TMEM57Q8N5G2 664 aa13.36□□□□□ -0.27
SAMM50-206ENST00000494795 ZKSCAN2Q63HK3 967 aa13.36□□□□□ -0.27
SAMM50-206ENST00000494795 DZIP1LQ8IYY4 767 aaKnown RBP13.35□□□□□ -0.27
SAMM50-206ENST00000494795 VAMP4O75379 141 aa13.35□□□□□ -0.27
SAMM50-206ENST00000494795 C8orf34Q49A92 452 aa13.35□□□□□ -0.27
SAMM50-206ENST00000494795 ITPRIPQ8IWB1 547 aa13.35□□□□□ -0.27
SAMM50-206ENST00000494795 USHBP1Q8N6Y0 703 aa13.35□□□□□ -0.27
SAMM50-206ENST00000494795 MVPQ14764 893 aaKnown RBP13.35□□□□□ -0.27
SAMM50-206ENST00000494795 FTSJ3Q8IY81 847 aaKnown RBP13.35□□□□□ -0.27
SAMM50-206ENST00000494795 ORAI2Q96SN7 254 aa13.35□□□□□ -0.27
SAMM50-206ENST00000494795 ABTB2Q8N961 1025 aa13.34□□□□□ -0.27
SAMM50-206ENST00000494795 ZBTB7CA1YPR0 619 aa13.34□□□□□ -0.27
SAMM50-206ENST00000494795 PIK3C2AO00443 1686 aa13.34□□□□□ -0.27
SAMM50-206ENST00000494795 ATF7IPQ6VMQ6 1270 aa13.34□□□□□ -0.27
SAMM50-206ENST00000494795 EYA1Q99502 592 aa13.34□□□□□ -0.27
SAMM50-206ENST00000494795 USP31Q70CQ4 1352 aa13.33□□□□□ -0.28
SAMM50-206ENST00000494795 NEFMP07197 916 aa13.33□□□□□ -0.28
SAMM50-206ENST00000494795 ZNF853P0CG23 659 aa13.33□□□□□ -0.28
SAMM50-206ENST00000494795 C1orf115Q9H7X2 142 aa13.33□□□□□ -0.28
SAMM50-206ENST00000494795 IL16Q14005 1332 aa13.33□□□□□ -0.28
SAMM50-206ENST00000494795 ESCO1Q5FWF5 840 aa13.33□□□□□ -0.28
SAMM50-206ENST00000494795 SEC24BO95487 1268 aa13.32□□□□□ -0.28
SAMM50-206ENST00000494795 AMPHP49418 695 aa13.32□□□□□ -0.28
SAMM50-206ENST00000494795 MTHFSDQ2M296 383 aaKnown RBP13.32□□□□□ -0.28
SAMM50-206ENST00000494795 SLC4A3P48751 1232 aa13.32□□□□□ -0.28
SAMM50-206ENST00000494795 NALCNQ8IZF0 1738 aa13.32□□□□□ -0.28
SAMM50-206ENST00000494795 DDX17Q92841 729 aaKnown RBP13.32□□□□□ -0.28
SAMM50-206ENST00000494795 PNNQ9H307 717 aaKnown RBP13.32□□□□□ -0.28
SAMM50-206ENST00000494795 SETD1BQ9UPS6 1966 aaKnown RBP13.32□□□□□ -0.28
SAMM50-206ENST00000494795 MS4A1P11836 297 aa13.31□□□□□ -0.28
SAMM50-206ENST00000494795 ADAMTSL3P82987 1691 aa13.31□□□□□ -0.28
SAMM50-206ENST00000494795 PHF8Q9UPP1 1060 aa13.3□□□□□ -0.28
SAMM50-206ENST00000494795 TWISTNBQ3B726 338 aaPredicted RBP13.3□□□□□ -0.28
SAMM50-206ENST00000494795 IPO9Q96P70 1041 aaKnown RBP13.3□□□□□ -0.28
SAMM50-206ENST00000494795 PDZRN3Q9UPQ7 1066 aa13.3□□□□□ -0.28
SAMM50-206ENST00000494795 MRPL50Q8N5N7 158 aaKnown RBP13.3□□□□□ -0.28
SAMM50-206ENST00000494795 CFAP44Q96MT7 982 aa13.3□□□□□ -0.28
SAMM50-206ENST00000494795 DNAJC5Q9H3Z4 198 aa13.29□□□□□ -0.28
SAMM50-206ENST00000494795 ANP32AP39687 249 aaKnown RBP13.29□□□□□ -0.28
SAMM50-206ENST00000494795 IFT57Q9NWB7 429 aa13.29□□□□□ -0.28
SAMM50-206ENST00000494795 MARF1Q9Y4F3 1742 aaKnown RBP13.29□□□□□ -0.28
SAMM50-206ENST00000494795 HOXC9P31274 260 aa13.28□□□□□ -0.28
SAMM50-206ENST00000494795 HSPA2P54652 639 aa13.28□□□□□ -0.28
SAMM50-206ENST00000494795 CHD2O14647 1828 aaKnown RBP13.28□□□□□ -0.28
SAMM50-206ENST00000494795 TTC21AQ8NDW8 1320 aa13.28□□□□□ -0.28
SAMM50-206ENST00000494795 NOP58Q9Y2X3 529 aaKnown RBP13.28□□□□□ -0.28
SAMM50-206ENST00000494795 GNAI1P63096 354 aa13.28□□□□□ -0.28
SAMM50-206ENST00000494795 LMOD2Q6P5Q4 547 aa13.28□□□□□ -0.28
SAMM50-206ENST00000494795 FMN2Q9NZ56 1722 aa13.27□□□□□ -0.28
SAMM50-206ENST00000494795 RGPD1P0DJD0 1748 aa13.26□□□□□ -0.29
SAMM50-206ENST00000494795 FLT4P35916 1363 aa13.26□□□□□ -0.29
SAMM50-206ENST00000494795 PIK3R4Q99570 1358 aa13.26□□□□□ -0.29
SAMM50-206ENST00000494795 LRRC59Q96AG4 307 aaKnown RBP13.26□□□□□ -0.29
SAMM50-206ENST00000494795 ZBTB40Q9NUA8 1239 aa13.26□□□□□ -0.29
SAMM50-206ENST00000494795 SBNO1A3KN83 1393 aa13.26□□□□□ -0.29
SAMM50-206ENST00000494795 CT47B1P0C2W7 299 aaPredicted RBP13.26□□□□□ -0.29
SAMM50-206ENST00000494795 PSME1Q06323 249 aa13.26□□□□□ -0.29
SAMM50-206ENST00000494795 FAM161AQ3B820 660 aa13.26□□□□□ -0.29
SAMM50-206ENST00000494795 NECTIN2Q92692 538 aa13.26□□□□□ -0.29
SAMM50-206ENST00000494795 NPHP4O75161 1426 aaPredicted RBP13.25□□□□□ -0.29
SAMM50-206ENST00000494795 NBR1Q14596 966 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms