RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 CD2BP2O95400 341 aaKnown RBP5.85□□□□□ -1.47
PRKD3-210ENST00000494667 ZFP91Q96JP5 570 aaPredicted RBP5.85□□□□□ -1.47
PRKD3-210ENST00000494667 TSPY26PQ9H489 355 aa5.85□□□□□ -1.47
PRKD3-210ENST00000494667 DDX19BQ9UMR2 479 aa5.85□□□□□ -1.47
PRKD3-210ENST00000494667 SETBP1Q9Y6X0 1596 aa5.85□□□□□ -1.47
PRKD3-210ENST00000494667 KIF24Q5T7B8 1368 aa5.85□□□□□ -1.47
PRKD3-210ENST00000494667 IL16Q14005 1332 aa5.85□□□□□ -1.47
PRKD3-210ENST00000494667 AK9Q5TCS8 1911 aa5.85□□□□□ -1.47
PRKD3-210ENST00000494667 REC8O95072 547 aa5.85□□□□□ -1.47
PRKD3-210ENST00000494667 KIF18AQ8NI77 898 aa5.85□□□□□ -1.47
PRKD3-210ENST00000494667 SYAP1Q96A49 352 aaPredicted RBP5.85□□□□□ -1.47
PRKD3-210ENST00000494667 KIF1BPQ96EK5 621 aa5.85□□□□□ -1.47
PRKD3-210ENST00000494667 SENP3-EIF4A1A0A087X0R7 540 aa5.85□□□□□ -1.47
PRKD3-210ENST00000494667 SMTNL1A8MU46 457 aa5.85□□□□□ -1.47
PRKD3-210ENST00000494667 BCCIPQ9P287 314 aaKnown RBP eCLIP5.85□□□□□ -1.47
PRKD3-210ENST00000494667 DMRT2Q9Y5R5 561 aa5.85□□□□□ -1.47
PRKD3-210ENST00000494667 APAF1O14727 1248 aa5.85□□□□□ -1.47
PRKD3-210ENST00000494667 ZDHHC9Q9Y397 364 aa5.85□□□□□ -1.47
PRKD3-210ENST00000494667 ASXL2Q76L83 1435 aa5.85□□□□□ -1.47
PRKD3-210ENST00000494667 DEPDC5O75140 1603 aa5.85□□□□□ -1.47
PRKD3-210ENST00000494667 CYP2C19P33261 490 aa5.84□□□□□ -1.47
PRKD3-210ENST00000494667 ZKSCAN2Q63HK3 967 aa5.84□□□□□ -1.47
PRKD3-210ENST00000494667 ZNF771Q7L3S4 317 aaPredicted RBP5.84□□□□□ -1.47
PRKD3-210ENST00000494667 KRT222Q8N1A0 295 aa5.84□□□□□ -1.47
PRKD3-210ENST00000494667 SPRYD3Q8NCJ5 442 aa5.84□□□□□ -1.47
PRKD3-210ENST00000494667 POLR3GLQ9BT43 218 aa5.84□□□□□ -1.47
PRKD3-210ENST00000494667 ZBTB40Q9NUA8 1239 aa5.84□□□□□ -1.47
PRKD3-210ENST00000494667 KNSTRNQ9Y448 316 aa5.84□□□□□ -1.47
PRKD3-210ENST00000494667 ERVK-7P63135 1459 aa5.84□□□□□ -1.47
PRKD3-210ENST00000494667 RIOK3O14730 519 aaKnown RBP5.84□□□□□ -1.47
PRKD3-210ENST00000494667 U2AF2P26368 475 aaKnown RBP eCLIP5.84□□□□□ -1.474e-8■■□□□ 12.8
PRKD3-210ENST00000494667 PABPN1Q86U42 306 aaKnown RBP eCLIP5.84□□□□□ -1.47
PRKD3-210ENST00000494667 BRMS1Q9HCU9 246 aa5.84□□□□□ -1.47
PRKD3-210ENST00000494667 PTCH1Q13635 1447 aa5.84□□□□□ -1.47
PRKD3-210ENST00000494667 TRAPPC8Q9Y2L5 1435 aa5.84□□□□□ -1.47
PRKD3-210ENST00000494667 EFCAB6Q5THR3 1501 aa5.84□□□□□ -1.47
PRKD3-210ENST00000494667 CLGNO14967 610 aa5.84□□□□□ -1.48
PRKD3-210ENST00000494667 PAXIP1Q6ZW49 1069 aaPredicted RBP5.84□□□□□ -1.48
PRKD3-210ENST00000494667 GCC1Q96CN9 775 aa5.84□□□□□ -1.48
PRKD3-210ENST00000494667 FEZ2Q9UHY8 353 aaPredicted RBP5.84□□□□□ -1.48
PRKD3-210ENST00000494667 PAXBP1Q9Y5B6 917 aa5.84□□□□□ -1.48
PRKD3-210ENST00000494667 NRXN1Q9ULB1 1477 aa5.84□□□□□ -1.48
PRKD3-210ENST00000494667 SAMD9LQ8IVG5 1584 aa5.83□□□□□ -1.48
PRKD3-210ENST00000494667 NOP2P46087 812 aaKnown RBP5.83□□□□□ -1.48
PRKD3-210ENST00000494667 KCNJ4P48050 445 aa5.83□□□□□ -1.48
PRKD3-210ENST00000494667 CHAF1AQ13111 956 aaPredicted RBP5.83□□□□□ -1.48
PRKD3-210ENST00000494667 RNF20Q5VTR2 975 aa5.83□□□□□ -1.48
PRKD3-210ENST00000494667 MCTP1Q6DN14 999 aa5.83□□□□□ -1.48
PRKD3-210ENST00000494667 DZIP1LQ8IYY4 767 aaKnown RBP5.83□□□□□ -1.48
PRKD3-210ENST00000494667 BRD1O95696 1058 aa5.83□□□□□ -1.48
PRKD3-210ENST00000494667 CUL4AQ13619 759 aa5.83□□□□□ -1.48
PRKD3-210ENST00000494667 RUNDC1Q96C34 613 aa5.83□□□□□ -1.48
PRKD3-210ENST00000494667 FUCA2Q9BTY2 467 aa5.83□□□□□ -1.48
PRKD3-210ENST00000494667 AATKQ6ZMQ8 1374 aa5.83□□□□□ -1.48
PRKD3-210ENST00000494667 ZNF644Q9H582 1327 aaPredicted RBP5.83□□□□□ -1.48
PRKD3-210ENST00000494667 CHD1LQ86WJ1 897 aa5.83□□□□□ -1.48
PRKD3-210ENST00000494667 ZNF397Q8NF99 534 aaPredicted RBP5.83□□□□□ -1.48
PRKD3-210ENST00000494667 ZNF622Q969S3 477 aaKnown RBP eCLIP5.83□□□□□ -1.48
PRKD3-210ENST00000494667 INTS4Q96HW7 963 aaKnown RBP5.83□□□□□ -1.48
PRKD3-210ENST00000494667 PTPRTO14522 1441 aa5.82□□□□□ -1.48
PRKD3-210ENST00000494667 ADGRB1O14514 1584 aa5.82□□□□□ -1.48
PRKD3-210ENST00000494667 SECISBP2LQ93073 1101 aaKnown RBP5.82□□□□□ -1.48
PRKD3-210ENST00000494667 ZNF428Q96B54 188 aa5.82□□□□□ -1.48
PRKD3-210ENST00000494667 MAP3K4Q9Y6R4 1608 aa5.82□□□□□ -1.48
PRKD3-210ENST00000494667 KNDC1Q76NI1 1749 aa5.82□□□□□ -1.48
PRKD3-210ENST00000494667 CEP120Q8N960 986 aa5.82□□□□□ -1.48
PRKD3-210ENST00000494667 IQUBQ8NA54 791 aa5.82□□□□□ -1.48
PRKD3-210ENST00000494667 UBXN6Q9BZV1 441 aa5.82□□□□□ -1.48
PRKD3-210ENST00000494667 FANCAO15360 1455 aa5.82□□□□□ -1.48
PRKD3-210ENST00000494667 COL3A1P02461 1466 aaPredicted RBP5.82□□□□□ -1.48
PRKD3-210ENST00000494667 VGLL3A8MV65 326 aa5.82□□□□□ -1.48
PRKD3-210ENST00000494667 EPB41L2O43491 1005 aaKnown RBP5.82□□□□□ -1.48
PRKD3-210ENST00000494667 TBC1D9Q6ZT07 1266 aa5.82□□□□□ -1.48
PRKD3-210ENST00000494667 RTL1A6NKG5 1358 aa5.81□□□□□ -1.48
PRKD3-210ENST00000494667 NSD2O96028 1365 aa5.81□□□□□ -1.48
PRKD3-210ENST00000494667 RPAP1Q9BWH6 1393 aaPredicted RBP5.81□□□□□ -1.48
PRKD3-210ENST00000494667 CDC45O75419 566 aa5.81□□□□□ -1.48
PRKD3-210ENST00000494667 MCM2P49736 904 aa5.81□□□□□ -1.48
PRKD3-210ENST00000494667 KCNF1Q9H3M0 494 aa5.81□□□□□ -1.48
PRKD3-210ENST00000494667 SYCE3A1L190 88 aa5.81□□□□□ -1.48
PRKD3-210ENST00000494667 KDM4AO75164 1064 aa5.81□□□□□ -1.48
PRKD3-210ENST00000494667 TDRD9Q8NDG6 1382 aaKnown RBP5.81□□□□□ -1.48
PRKD3-210ENST00000494667 GLI2P10070 1586 aa5.81□□□□□ -1.48
PRKD3-210ENST00000494667 VWDEQ8N2E2 1590 aa5.81□□□□□ -1.48
PRKD3-210ENST00000494667 SOX12O15370 315 aa5.81□□□□□ -1.48
PRKD3-210ENST00000494667 ALDH1L2Q3SY69 923 aa5.81□□□□□ -1.48
PRKD3-210ENST00000494667 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.81□□□□□ -1.48
PRKD3-210ENST00000494667 ATP8B1O43520 1251 aa5.8□□□□□ -1.48
PRKD3-210ENST00000494667 CHD2O14647 1828 aaKnown RBP5.8□□□□□ -1.48
PRKD3-210ENST00000494667 PRG4Q92954 1404 aaPredicted RBP5.8□□□□□ -1.48
PRKD3-210ENST00000494667 SPDYE4A6NLX3 237 aa5.8□□□□□ -1.48
PRKD3-210ENST00000494667 ZBTB22O15209 634 aa5.8□□□□□ -1.48
PRKD3-210ENST00000494667 USP26Q9BXU7 913 aa5.8□□□□□ -1.48
PRKD3-210ENST00000494667 ATG3Q9NT62 314 aa5.8□□□□□ -1.48
PRKD3-210ENST00000494667 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.8□□□□□ -1.48
PRKD3-210ENST00000494667 TET3O43151 1660 aa5.8□□□□□ -1.48
PRKD3-210ENST00000494667 N4BP2Q86UW6 1770 aaPredicted RBP5.8□□□□□ -1.48
PRKD3-210ENST00000494667 ATF7IPQ6VMQ6 1270 aa5.8□□□□□ -1.48
PRKD3-210ENST00000494667 JARID2Q92833 1246 aaPredicted RBP5.8□□□□□ -1.48
PRKD3-210ENST00000494667 RBM27Q9P2N5 1060 aaKnown RBP5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 109.4 ms