RNA–Protein interactions for RNA: ENST00000494195.1

HMGB3P14-201, Transcript of high mobility group box 3 pseudogene 14, humanhuman

BASIC

Gene HMGB3P14, Length 599 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P14-201ENST00000494195 SMPD1P17405 629 aa14.67□□□□□ -0.06
HMGB3P14-201ENST00000494195 GRM5P41594 1212 aa14.67□□□□□ -0.06
HMGB3P14-201ENST00000494195 KCTD15Q96SI1 283 aaPredicted RBP14.66□□□□□ -0.06
HMGB3P14-201ENST00000494195 TRAK2O60296 914 aa14.65□□□□□ -0.06
HMGB3P14-201ENST00000494195 NR5A1Q13285 461 aa14.65□□□□□ -0.06
HMGB3P14-201ENST00000494195 POM121CA8CG34 1229 aa14.64□□□□□ -0.07
HMGB3P14-201ENST00000494195 FSHRP23945 695 aa14.64□□□□□ -0.07
HMGB3P14-201ENST00000494195 FAM187AA6NFU0 413 aa14.63□□□□□ -0.07
HMGB3P14-201ENST00000494195 SEMA3FQ13275 785 aa14.63□□□□□ -0.07
HMGB3P14-201ENST00000494195 ESPNB1AK53 854 aa14.61□□□□□ -0.07
HMGB3P14-201ENST00000494195 DGAT1O75907 488 aa14.61□□□□□ -0.07
HMGB3P14-201ENST00000494195 NNTQ13423 1086 aa14.61□□□□□ -0.07
HMGB3P14-201ENST00000494195 ALG2Q9H553 416 aa14.61□□□□□ -0.07
HMGB3P14-201ENST00000494195 PKDCCQ504Y2 493 aa14.6□□□□□ -0.07
HMGB3P14-201ENST00000494195 INTS6LQ5JSJ4 861 aaKnown RBP14.6□□□□□ -0.07
HMGB3P14-201ENST00000494195 CEP126Q9P2H0 1117 aa14.6□□□□□ -0.07
HMGB3P14-201ENST00000494195 GIGYF1O75420 1035 aaPredicted RBP14.59□□□□□ -0.07
HMGB3P14-201ENST00000494195 SEPT12Q8IYM1 358 aa14.59□□□□□ -0.07
HMGB3P14-201ENST00000494195 TIMELESSQ9UNS1 1208 aa14.58□□□□□ -0.08
HMGB3P14-201ENST00000494195 NR3C2P08235 984 aa14.57□□□□□ -0.08
HMGB3P14-201ENST00000494195 RNF20Q5VTR2 975 aa14.57□□□□□ -0.08
HMGB3P14-201ENST00000494195 CCDC116Q8IYX3 515 aa14.57□□□□□ -0.08
HMGB3P14-201ENST00000494195 HPS1Q92902 700 aa14.57□□□□□ -0.08
HMGB3P14-201ENST00000494195 DHX9Q08211 1270 aaKnown RBP14.56□□□□□ -0.08
HMGB3P14-201ENST00000494195 ADAMTS19Q8TE59 1207 aa14.56□□□□□ -0.08
HMGB3P14-201ENST00000494195 AVPP01185 164 aa14.55□□□□□ -0.08
HMGB3P14-201ENST00000494195 HDGFL1Q5TGJ6 251 aa14.55□□□□□ -0.08
HMGB3P14-201ENST00000494195 CCDC125Q86Z20 511 aa14.55□□□□□ -0.08
HMGB3P14-201ENST00000494195 RAB15P59190 212 aa14.54□□□□□ -0.08
HMGB3P14-201ENST00000494195 GLMNQ92990 594 aa14.54□□□□□ -0.08
HMGB3P14-201ENST00000494195 SLFNL1Q499Z3 407 aa14.53□□□□□ -0.08
HMGB3P14-201ENST00000494195 ZNF777Q9ULD5 760 aaPredicted RBP14.53□□□□□ -0.08
HMGB3P14-201ENST00000494195 EMILIN1Q9Y6C2 1016 aa14.53□□□□□ -0.08
HMGB3P14-201ENST00000494195 PPP1R26Q5T8A7 1209 aaPredicted RBP14.51□□□□□ -0.09
HMGB3P14-201ENST00000494195 PHTF2Q8N3S3 785 aa14.51□□□□□ -0.09
HMGB3P14-201ENST00000494195 ERVH48-1M5A8F1 160 aa14.5□□□□□ -0.09
HMGB3P14-201ENST00000494195 WDR4P57081 412 aaKnown RBP14.5□□□□□ -0.09
HMGB3P14-201ENST00000494195 RNF135Q8IUD6 432 aa14.5□□□□□ -0.09
HMGB3P14-201ENST00000494195 CALR3Q96L12 384 aaKnown RBP14.5□□□□□ -0.09
HMGB3P14-201ENST00000494195 KLF16Q9BXK1 252 aaPredicted RBP14.5□□□□□ -0.09
HMGB3P14-201ENST00000494195 CTC1Q2NKJ3 1217 aa14.49□□□□□ -0.09
HMGB3P14-201ENST00000494195 PGPEP1Q9NXJ5 209 aa14.49□□□□□ -0.09
HMGB3P14-201ENST00000494195 TIMP2P16035 220 aa14.48□□□□□ -0.09
HMGB3P14-201ENST00000494195 ZIC2O95409 532 aaPredicted RBP14.47□□□□□ -0.09
HMGB3P14-201ENST00000494195 SMCPP49901 116 aaPredicted RBP14.47□□□□□ -0.09
HMGB3P14-201ENST00000494195 Q6ZNB5 142 aa14.47□□□□□ -0.09
HMGB3P14-201ENST00000494195 ITPKCQ96DU7 683 aa14.47□□□□□ -0.09
HMGB3P14-201ENST00000494195 MYT1Q01538 1121 aa14.46□□□□□ -0.09
HMGB3P14-201ENST00000494195 CRIPAKQ8N1N5 446 aa14.46□□□□□ -0.09
HMGB3P14-201ENST00000494195 TRIM52Q96A61 297 aa14.46□□□□□ -0.09
HMGB3P14-201ENST00000494195 CCDC85AQ96PX6 553 aaPredicted RBP14.46□□□□□ -0.09
HMGB3P14-201ENST00000494195 TMPRSS4Q9NRS4 437 aa14.46□□□□□ -0.09
HMGB3P14-201ENST00000494195 CHIC2Q9UKJ5 165 aa14.46□□□□□ -0.09
HMGB3P14-201ENST00000494195 NFATC2IPQ8NCF5 419 aa14.45□□□□□ -0.1
HMGB3P14-201ENST00000494195 ZFAND3Q9H8U3 227 aa14.45□□□□□ -0.1
HMGB3P14-201ENST00000494195 PCDHB11Q9Y5F2 797 aa14.45□□□□□ -0.1
HMGB3P14-201ENST00000494195 PIK3CDO00329 1044 aa14.44□□□□□ -0.1
HMGB3P14-201ENST00000494195 CAPN5O15484 640 aaPredicted RBP14.44□□□□□ -0.1
HMGB3P14-201ENST00000494195 ZNF784Q8NCA9 323 aaPredicted RBP14.44□□□□□ -0.1
HMGB3P14-201ENST00000494195 UCN2Q96RP3 112 aa14.44□□□□□ -0.1
HMGB3P14-201ENST00000494195 AXIN1O15169 862 aa14.42□□□□□ -0.1
HMGB3P14-201ENST00000494195 MAP7D1Q3KQU3 841 aa14.42□□□□□ -0.1
HMGB3P14-201ENST00000494195 PLPP7Q8NBV4 271 aa14.42□□□□□ -0.1
HMGB3P14-201ENST00000494195 DOLKQ9UPQ8 538 aa14.42□□□□□ -0.1
HMGB3P14-201ENST00000494195 AAASQ9NRG9 546 aa14.41□□□□□ -0.1
HMGB3P14-201ENST00000494195 SKIP12755 728 aa14.4□□□□□ -0.1
HMGB3P14-201ENST00000494195 TSGA10IPQ3SY00 556 aa14.4□□□□□ -0.1
HMGB3P14-201ENST00000494195 ARID3CA6NKF2 412 aa14.39□□□□□ -0.11
HMGB3P14-201ENST00000494195 ST8SIA5O15466 376 aa14.39□□□□□ -0.11
HMGB3P14-201ENST00000494195 LILRA1O75019 489 aa14.39□□□□□ -0.11
HMGB3P14-201ENST00000494195 ERVK-9P63128 1117 aa14.39□□□□□ -0.11
HMGB3P14-201ENST00000494195 TRAF7Q6Q0C0 670 aa14.39□□□□□ -0.11
HMGB3P14-201ENST00000494195 CYLDQ9NQC7 956 aa14.39□□□□□ -0.11
HMGB3P14-201ENST00000494195 CC2D2BQ6DHV5 1058 aa14.38□□□□□ -0.11
HMGB3P14-201ENST00000494195 TBC1D9Q6ZT07 1266 aa14.38□□□□□ -0.11
HMGB3P14-201ENST00000494195 CDCA7Q9BWT1 371 aaPredicted RBP14.38□□□□□ -0.11
HMGB3P14-201ENST00000494195 Q6ZVU0 165 aa14.37□□□□□ -0.11
HMGB3P14-201ENST00000494195 ATP9BO43861 1147 aa14.36□□□□□ -0.11
HMGB3P14-201ENST00000494195 CBLBQ13191 982 aa14.36□□□□□ -0.11
HMGB3P14-201ENST00000494195 MEIOBQ8N635 442 aa14.36□□□□□ -0.11
HMGB3P14-201ENST00000494195 USP17L5A8MUK1 530 aa14.35□□□□□ -0.11
HMGB3P14-201ENST00000494195 LCE2BO14633 110 aa14.35□□□□□ -0.11
HMGB3P14-201ENST00000494195 LZTS3O60299 673 aaPredicted RBP14.35□□□□□ -0.11
HMGB3P14-201ENST00000494195 SCTRP47872 440 aa14.35□□□□□ -0.11
HMGB3P14-201ENST00000494195 OXLD1Q5BKU9 147 aa14.35□□□□□ -0.11
HMGB3P14-201ENST00000494195 MYCP01106 439 aaPredicted RBP14.34□□□□□ -0.11
HMGB3P14-201ENST00000494195 ADD1P35611 737 aaKnown RBP14.34□□□□□ -0.11
HMGB3P14-201ENST00000494195 USP4Q13107 963 aa14.34□□□□□ -0.11
HMGB3P14-201ENST00000494195 SIRT1Q96EB6 747 aa14.34□□□□□ -0.11
HMGB3P14-201ENST00000494195 PPP1R12CQ9BZL4 782 aa14.34□□□□□ -0.11
HMGB3P14-201ENST00000494195 ESF1Q9H501 851 aaKnown RBP14.34□□□□□ -0.11
HMGB3P14-201ENST00000494195 PALM3A6NDB9 673 aaPredicted RBP14.33□□□□□ -0.12
HMGB3P14-201ENST00000494195 TFIP11Q9UBB9 837 aaKnown RBP14.33□□□□□ -0.12
HMGB3P14-201ENST00000494195 ADH1AP07327 375 aa14.32□□□□□ -0.12
HMGB3P14-201ENST00000494195 PLEKHM2Q8IWE5 1019 aa14.32□□□□□ -0.12
HMGB3P14-201ENST00000494195 EML3Q32P44 896 aa14.31□□□□□ -0.12
HMGB3P14-201ENST00000494195 C1orf115Q9H7X2 142 aa14.31□□□□□ -0.12
HMGB3P14-201ENST00000494195 MAFBQ9Y5Q3 323 aaPredicted RBP14.31□□□□□ -0.12
HMGB3P14-201ENST00000494195 USP17L3A6NCW0 530 aa14.3□□□□□ -0.12
HMGB3P14-201ENST00000494195 USP17L4A6NCW7 530 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 838 ms