RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 PSDA5PKW4 1024 aaPredicted RBP11.52□□□□□ -0.57
HDAC6-234ENST00000493923 SOX12O15370 315 aa11.52□□□□□ -0.57
HDAC6-234ENST00000493923 EVA1CP58658 441 aa11.52□□□□□ -0.57
HDAC6-234ENST00000493923 CARD11Q9BXL7 1154 aa11.52□□□□□ -0.57
HDAC6-234ENST00000493923 MON2Q7Z3U7 1717 aa11.52□□□□□ -0.57
HDAC6-234ENST00000493923 NFAT5O94916 1531 aa11.51□□□□□ -0.57
HDAC6-234ENST00000493923 TRIM37O94972 964 aa11.51□□□□□ -0.57
HDAC6-234ENST00000493923 SF3B2Q13435 895 aaKnown RBP11.51□□□□□ -0.57
HDAC6-234ENST00000493923 BARGINQ6ZT62 677 aa11.51□□□□□ -0.57
HDAC6-234ENST00000493923 ANP32EQ9BTT0 268 aa11.51□□□□□ -0.57
HDAC6-234ENST00000493923 BRD4O60885 1362 aaPredicted RBP11.51□□□□□ -0.57
HDAC6-234ENST00000493923 EZH2Q15910 746 aaKnown RBP11.5□□□□□ -0.57
HDAC6-234ENST00000493923 TCP11L2Q8N4U5 519 aa11.5□□□□□ -0.57
HDAC6-234ENST00000493923 AATKQ6ZMQ8 1374 aa11.5□□□□□ -0.57
HDAC6-234ENST00000493923 PARP4Q9UKK3 1724 aaKnown RBP11.49□□□□□ -0.57
HDAC6-234ENST00000493923 BAG6P46379 1132 aa11.49□□□□□ -0.57
HDAC6-234ENST00000493923 PTF1AQ7RTS3 328 aa11.49□□□□□ -0.57
HDAC6-234ENST00000493923 ARHGEF25Q86VW2 580 aa11.49□□□□□ -0.57
HDAC6-234ENST00000493923 NME9Q86XW9 330 aa11.49□□□□□ -0.57
HDAC6-234ENST00000493923 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.49□□□□□ -0.57
HDAC6-234ENST00000493923 SLC12A5Q9H2X9 1139 aa11.49□□□□□ -0.57
HDAC6-234ENST00000493923 KTN1Q86UP2 1357 aaKnown RBP11.49□□□□□ -0.57
HDAC6-234ENST00000493923 TONSLQ96HA7 1378 aa11.49□□□□□ -0.57
HDAC6-234ENST00000493923 SBNO2Q9Y2G9 1366 aa11.49□□□□□ -0.57
HDAC6-234ENST00000493923 PEAK1Q9H792 1746 aa11.49□□□□□ -0.57
HDAC6-234ENST00000493923 WNK3Q9BYP7 1800 aa11.49□□□□□ -0.57
HDAC6-234ENST00000493923 CAMKK2Q96RR4 588 aa11.48□□□□□ -0.57
HDAC6-234ENST00000493923 TESK2Q96S53 571 aa11.48□□□□□ -0.57
HDAC6-234ENST00000493923 DISP2A7MBM2 1401 aa11.48□□□□□ -0.57
HDAC6-234ENST00000493923 CRB1P82279 1406 aa11.48□□□□□ -0.57
HDAC6-234ENST00000493923 LRRC37A3O60309 1634 aa11.48□□□□□ -0.57
HDAC6-234ENST00000493923 ZNF692Q9BU19 519 aaPredicted RBP11.47□□□□□ -0.57
HDAC6-234ENST00000493923 SBF2Q86WG5 1849 aa11.46□□□□□ -0.57
HDAC6-234ENST00000493923 USP54Q70EL1 1684 aa11.46□□□□□ -0.57
HDAC6-234ENST00000493923 TTC21AQ8NDW8 1320 aa11.46□□□□□ -0.57
HDAC6-234ENST00000493923 DIEXFQ68CQ4 756 aaKnown RBP11.46□□□□□ -0.57
HDAC6-234ENST00000493923 SAMD1Q6SPF0 538 aaPredicted RBP11.46□□□□□ -0.57
HDAC6-234ENST00000493923 FAM196AQ6ZSG2 479 aa11.46□□□□□ -0.57
HDAC6-234ENST00000493923 TMC1Q8TDI8 760 aa11.46□□□□□ -0.57
HDAC6-234ENST00000493923 RREB1Q92766 1687 aa11.46□□□□□ -0.58
HDAC6-234ENST00000493923 A0A1W2PP64 1363 aa11.45□□□□□ -0.58
HDAC6-234ENST00000493923 USP31Q70CQ4 1352 aa11.45□□□□□ -0.58
HDAC6-234ENST00000493923 WDR17Q8IZU2 1322 aa11.45□□□□□ -0.58
HDAC6-234ENST00000493923 ST20-MTHFSA0A0A6YYL1 179 aa11.45□□□□□ -0.58
HDAC6-234ENST00000493923 APBA3O96018 575 aa11.45□□□□□ -0.58
HDAC6-234ENST00000493923 PDE3BQ13370 1112 aa11.45□□□□□ -0.58
HDAC6-234ENST00000493923 R3HDM1Q15032 1099 aaKnown RBP11.45□□□□□ -0.58
HDAC6-234ENST00000493923 ZNF219Q9P2Y4 722 aaPredicted RBP11.45□□□□□ -0.58
HDAC6-234ENST00000493923 NUP188Q5SRE5 1749 aa11.45□□□□□ -0.58
HDAC6-234ENST00000493923 LTN1O94822 1766 aa11.44□□□□□ -0.58
HDAC6-234ENST00000493923 FBLN1P23142 703 aa11.44□□□□□ -0.58
HDAC6-234ENST00000493923 TOM1L2Q6ZVM7 507 aa11.44□□□□□ -0.58
HDAC6-234ENST00000493923 MARCH10Q8NA82 808 aaPredicted RBP11.44□□□□□ -0.58
HDAC6-234ENST00000493923 THRAP3Q9Y2W1 955 aaKnown RBP11.44□□□□□ -0.58
HDAC6-234ENST00000493923 LRP5O75197 1615 aa11.43□□□□□ -0.58
HDAC6-234ENST00000493923 PRKCSHP14314 528 aaPredicted RBP11.43□□□□□ -0.58
HDAC6-234ENST00000493923 OVOS2A0A0J9YW53 1432 aa11.42□□□□□ -0.58
HDAC6-234ENST00000493923 OVOS2Q6IE36 1432 aa11.42□□□□□ -0.58
HDAC6-234ENST00000493923 KCNH5Q8NCM2 988 aa11.41□□□□□ -0.58
HDAC6-234ENST00000493923 CARD10Q9BWT7 1032 aa11.41□□□□□ -0.58
HDAC6-234ENST00000493923 EDC4Q6P2E9 1401 aaKnown RBP11.41□□□□□ -0.58
HDAC6-234ENST00000493923 CSB-PGBD3P0DP91 1061 aa11.4□□□□□ -0.58
HDAC6-234ENST00000493923 DDB1Q16531 1140 aa11.4□□□□□ -0.58
HDAC6-234ENST00000493923 OVOS2A0A0G2JMS6 1433 aa11.4□□□□□ -0.58
HDAC6-234ENST00000493923 HDGFL2Q7Z4V5 671 aaPredicted RBP11.39□□□□□ -0.59
HDAC6-234ENST00000493923 PROM2Q8N271 834 aa11.39□□□□□ -0.59
HDAC6-234ENST00000493923 RGPD2P0DJD1 1756 aa11.39□□□□□ -0.59
HDAC6-234ENST00000493923 ERBB3P21860 1342 aa11.38□□□□□ -0.59
HDAC6-234ENST00000493923 PUS7Q96PZ0 661 aaKnown RBP11.38□□□□□ -0.59
HDAC6-234ENST00000493923 ANO8Q9HCE9 1232 aaPredicted RBP11.38□□□□□ -0.59
HDAC6-234ENST00000493923 ABCC6O95255 1503 aa11.38□□□□□ -0.59
HDAC6-234ENST00000493923 USP47Q96K76 1375 aa11.38□□□□□ -0.59
HDAC6-234ENST00000493923 KAT6BQ8WYB5 2073 aa11.37□□□□□ -0.59
HDAC6-234ENST00000493923 KCNQ2O43526 872 aa11.37□□□□□ -0.59
HDAC6-234ENST00000493923 ANKRD24Q8TF21 1146 aa11.37□□□□□ -0.59
HDAC6-234ENST00000493923 NLRP2Q9NX02 1062 aa11.37□□□□□ -0.59
HDAC6-234ENST00000493923 TERF2IPQ9NYB0 399 aa11.37□□□□□ -0.59
HDAC6-234ENST00000493923 PDGFDQ9GZP0 370 aaPredicted RBP11.36□□□□□ -0.59
HDAC6-234ENST00000493923 PARD3Q8TEW0 1356 aa11.36□□□□□ -0.59
HDAC6-234ENST00000493923 MYOM1P52179 1685 aa11.36□□□□□ -0.59
HDAC6-234ENST00000493923 MAP3K19Q56UN5 1328 aa11.35□□□□□ -0.59
HDAC6-234ENST00000493923 TNS2Q63HR2 1409 aa11.35□□□□□ -0.59
HDAC6-234ENST00000493923 LTV1Q96GA3 475 aaPredicted RBP11.35□□□□□ -0.59
HDAC6-234ENST00000493923 ACSBG1Q96GR2 724 aa11.35□□□□□ -0.59
HDAC6-234ENST00000493923 BCL11BQ9C0K0 894 aaPredicted RBP11.35□□□□□ -0.59
HDAC6-234ENST00000493923 CCDC7Q96M83 1385 aa11.35□□□□□ -0.59
HDAC6-234ENST00000493923 BCL9O00512 1426 aa11.35□□□□□ -0.59
HDAC6-234ENST00000493923 RGPD3A6NKT7 1758 aaPredicted RBP11.34□□□□□ -0.59
HDAC6-234ENST00000493923 RGPD4Q7Z3J3 1758 aa11.34□□□□□ -0.59
HDAC6-234ENST00000493923 FAM208AQ9UK61 1670 aaKnown RBP11.34□□□□□ -0.59
HDAC6-234ENST00000493923 ANKRD36BQ8N2N9 1353 aa11.34□□□□□ -0.59
HDAC6-234ENST00000493923 EXOC5O00471 708 aa11.34□□□□□ -0.59
HDAC6-234ENST00000493923 MYCNP04198 464 aaPredicted RBP11.34□□□□□ -0.59
HDAC6-234ENST00000493923 IP6K1Q92551 441 aa11.34□□□□□ -0.59
HDAC6-234ENST00000493923 GGNBP2Q9H3C7 697 aa11.34□□□□□ -0.59
HDAC6-234ENST00000493923 FYB1O15117 783 aa11.33□□□□□ -0.6
HDAC6-234ENST00000493923 RRS1Q15050 365 aaKnown RBP11.33□□□□□ -0.6
HDAC6-234ENST00000493923 CDCA7Q9BWT1 371 aaPredicted RBP11.33□□□□□ -0.6
HDAC6-234ENST00000493923 CARD14Q9BXL6 1004 aa11.33□□□□□ -0.6
HDAC6-234ENST00000493923 CASZ1Q86V15 1759 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms