RNA–Protein interactions for RNA: ENST00000493271.1

SNRNP200-207, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 3

Gene SNRNP200, Length 585 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-207ENST00000493271 ZNF692Q9BU19 519 aaPredicted RBP15.86■□□□□ 0.13
SNRNP200-207ENST00000493271 CABP1Q9NZU7 370 aa15.86■□□□□ 0.13
SNRNP200-207ENST00000493271 EVC2Q86UK5 1308 aa15.86■□□□□ 0.13
SNRNP200-207ENST00000493271 CPSF1Q10570 1443 aaKnown RBP15.85■□□□□ 0.13
SNRNP200-207ENST00000493271 SBF2Q86WG5 1849 aa15.83■□□□□ 0.12
SNRNP200-207ENST00000493271 ZBTB7CA1YPR0 619 aa15.83■□□□□ 0.12
SNRNP200-207ENST00000493271 TTC21AQ8NDW8 1320 aa15.83■□□□□ 0.12
SNRNP200-207ENST00000493271 ABCC6O95255 1503 aa15.83■□□□□ 0.12
SNRNP200-207ENST00000493271 TRPM1Q7Z4N2 1603 aa15.83■□□□□ 0.12
SNRNP200-207ENST00000493271 PIK3C2AO00443 1686 aa15.83■□□□□ 0.12
SNRNP200-207ENST00000493271 COL18A1P39060 1754 aa15.82■□□□□ 0.12
SNRNP200-207ENST00000493271 WNK3Q9BYP7 1800 aa15.82■□□□□ 0.12
SNRNP200-207ENST00000493271 ARHGEF25Q86VW2 580 aa15.82■□□□□ 0.12
SNRNP200-207ENST00000493271 CARD10Q9BWT7 1032 aa15.82■□□□□ 0.12
SNRNP200-207ENST00000493271 CCDC7Q96M83 1385 aa15.81■□□□□ 0.12
SNRNP200-207ENST00000493271 AKAP12Q02952 1782 aa15.8■□□□□ 0.12
SNRNP200-207ENST00000493271 CASZ1Q86V15 1759 aa15.8■□□□□ 0.12
SNRNP200-207ENST00000493271 TTC21BQ7Z4L5 1316 aa15.79■□□□□ 0.12
SNRNP200-207ENST00000493271 MARCH10Q8NA82 808 aaPredicted RBP15.79■□□□□ 0.12
SNRNP200-207ENST00000493271 AXIN2Q9Y2T1 843 aa15.79■□□□□ 0.12
SNRNP200-207ENST00000493271 EXOC5O00471 708 aa15.78■□□□□ 0.12
SNRNP200-207ENST00000493271 CSB-PGBD3P0DP91 1061 aa15.78■□□□□ 0.12
SNRNP200-207ENST00000493271 ANO8Q9HCE9 1232 aaPredicted RBP15.78■□□□□ 0.12
SNRNP200-207ENST00000493271 STK32BQ9NY57 414 aa15.78■□□□□ 0.12
SNRNP200-207ENST00000493271 TNS2Q63HR2 1409 aa15.77■□□□□ 0.11
SNRNP200-207ENST00000493271 TXNRD1Q16881 649 aa15.76■□□□□ 0.11
SNRNP200-207ENST00000493271 NFAT5O94916 1531 aa15.75■□□□□ 0.11
SNRNP200-207ENST00000493271 SLC15A2Q16348 729 aa15.75■□□□□ 0.11
SNRNP200-207ENST00000493271 PROM2Q8N271 834 aa15.75■□□□□ 0.11
SNRNP200-207ENST00000493271 L3MBTL2Q969R5 705 aa15.75■□□□□ 0.11
SNRNP200-207ENST00000493271 ROCK2O75116 1388 aaKnown RBP15.75■□□□□ 0.11
SNRNP200-207ENST00000493271 KTN1Q86UP2 1357 aaKnown RBP15.74■□□□□ 0.11
SNRNP200-207ENST00000493271 SBNO2Q9Y2G9 1366 aa15.74■□□□□ 0.11
SNRNP200-207ENST00000493271 PTGER2P43116 358 aa15.73■□□□□ 0.11
SNRNP200-207ENST00000493271 MTFR1LQ9H019 292 aa15.73■□□□□ 0.11
SNRNP200-207ENST00000493271 USP31Q70CQ4 1352 aa15.73■□□□□ 0.11
SNRNP200-207ENST00000493271 ZBTB7AO95365 584 aa15.72■□□□□ 0.11
SNRNP200-207ENST00000493271 PTF1AQ7RTS3 328 aa15.72■□□□□ 0.11
SNRNP200-207ENST00000493271 NHSQ6T4R5 1651 aa15.71■□□□□ 0.11
SNRNP200-207ENST00000493271 USP54Q70EL1 1684 aa15.71■□□□□ 0.11
SNRNP200-207ENST00000493271 RGPD5Q99666 1765 aa15.71■□□□□ 0.11
SNRNP200-207ENST00000493271 ERBB3P21860 1342 aa15.7■□□□□ 0.1
SNRNP200-207ENST00000493271 MYOM1P52179 1685 aa15.7■□□□□ 0.1
SNRNP200-207ENST00000493271 SOX12O15370 315 aa15.7■□□□□ 0.1
SNRNP200-207ENST00000493271 MON2Q7Z3U7 1717 aa15.7■□□□□ 0.1
SNRNP200-207ENST00000493271 PDGFDQ9GZP0 370 aaPredicted RBP15.69■□□□□ 0.1
SNRNP200-207ENST00000493271 MAP3K5Q99683 1374 aa15.68■□□□□ 0.1
SNRNP200-207ENST00000493271 IL2RBP14784 551 aa15.68■□□□□ 0.1
SNRNP200-207ENST00000493271 SYT17Q9BSW7 474 aa15.68■□□□□ 0.1
SNRNP200-207ENST00000493271 ATF5Q9Y2D1 282 aaPredicted RBP15.68■□□□□ 0.1
SNRNP200-207ENST00000493271 SGIP1Q9BQI5 828 aa15.67■□□□□ 0.1
SNRNP200-207ENST00000493271 FHDC1Q9C0D6 1143 aaPredicted RBP15.67■□□□□ 0.1
SNRNP200-207ENST00000493271 PAPPAQ13219 1627 aa15.66■□□□□ 0.1
SNRNP200-207ENST00000493271 HDGFL2Q7Z4V5 671 aaPredicted RBP15.66■□□□□ 0.1
SNRNP200-207ENST00000493271 NLRP2Q9NX02 1062 aa15.66■□□□□ 0.1
SNRNP200-207ENST00000493271 EDC4Q6P2E9 1401 aaKnown RBP15.65■□□□□ 0.1
SNRNP200-207ENST00000493271 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.64■□□□□ 0.09
SNRNP200-207ENST00000493271 ZNF784Q8NCA9 323 aaPredicted RBP15.64■□□□□ 0.09
SNRNP200-207ENST00000493271 SLC16A10Q8TF71 515 aa15.64■□□□□ 0.09
SNRNP200-207ENST00000493271 PUS7Q96PZ0 661 aaKnown RBP15.64■□□□□ 0.09
SNRNP200-207ENST00000493271 ARXQ96QS3 562 aa15.64■□□□□ 0.09
SNRNP200-207ENST00000493271 SLC27A3Q5K4L6 730 aa15.63■□□□□ 0.09
SNRNP200-207ENST00000493271 ANKRD24Q8TF21 1146 aa15.63■□□□□ 0.09
SNRNP200-207ENST00000493271 ACSBG1Q96GR2 724 aa15.63■□□□□ 0.09
SNRNP200-207ENST00000493271 TERF2IPQ9NYB0 399 aa15.63■□□□□ 0.09
SNRNP200-207ENST00000493271 CD163L1Q9NR16 1453 aa15.63■□□□□ 0.09
SNRNP200-207ENST00000493271 LTN1O94822 1766 aa15.62■□□□□ 0.09
SNRNP200-207ENST00000493271 UTRNP46939 3433 aa15.62■□□□□ 0.09
SNRNP200-207ENST00000493271 NME9Q86XW9 330 aa15.62■□□□□ 0.09
SNRNP200-207ENST00000493271 SIN3AQ96ST3 1273 aa15.62■□□□□ 0.09
SNRNP200-207ENST00000493271 FAM208AQ9UK61 1670 aaKnown RBP15.62■□□□□ 0.09
SNRNP200-207ENST00000493271 BTAF1O14981 1849 aa15.61■□□□□ 0.09
SNRNP200-207ENST00000493271 SLC24A1O60721 1099 aa15.6■□□□□ 0.09
SNRNP200-207ENST00000493271 NEUROD1Q13562 356 aa15.6■□□□□ 0.09
SNRNP200-207ENST00000493271 TMC1Q8TDI8 760 aa15.6■□□□□ 0.09
SNRNP200-207ENST00000493271 CARD11Q9BXL7 1154 aa15.6■□□□□ 0.09
SNRNP200-207ENST00000493271 CHD4Q14839 1912 aa15.6■□□□□ 0.09
SNRNP200-207ENST00000493271 QSER1Q2KHR3 1735 aa15.6■□□□□ 0.09
SNRNP200-207ENST00000493271 POLD1P28340 1107 aa15.59■□□□□ 0.09
SNRNP200-207ENST00000493271 IP6K1Q92551 441 aa15.59■□□□□ 0.09
SNRNP200-207ENST00000493271 HMGB2P26583 209 aaKnown RBP15.58■□□□□ 0.08
SNRNP200-207ENST00000493271 ZNF827Q17R98 1081 aa15.57■□□□□ 0.08
SNRNP200-207ENST00000493271 AKT1S1Q96B36 256 aa15.57■□□□□ 0.08
SNRNP200-207ENST00000493271 SLC12A5Q9H2X9 1139 aa15.57■□□□□ 0.08
SNRNP200-207ENST00000493271 LRRC4BQ9NT99 713 aa15.57■□□□□ 0.08
SNRNP200-207ENST00000493271 A0A1W2PP64 1363 aa15.57■□□□□ 0.08
SNRNP200-207ENST00000493271 ANKRD36BQ8N2N9 1353 aa15.56■□□□□ 0.08
SNRNP200-207ENST00000493271 COL24A1Q17RW2 1714 aa15.55■□□□□ 0.08
SNRNP200-207ENST00000493271 GPR162Q16538 588 aa15.54■□□□□ 0.08
SNRNP200-207ENST00000493271 DDX54Q8TDD1 881 aaKnown RBP15.54■□□□□ 0.08
SNRNP200-207ENST00000493271 COG3Q96JB2 828 aa15.54■□□□□ 0.08
SNRNP200-207ENST00000493271 PNPLA7Q6ZV29 1317 aa15.53■□□□□ 0.08
SNRNP200-207ENST00000493271 C1QTNF8P60827 252 aa15.53■□□□□ 0.08
SNRNP200-207ENST00000493271 TFCP2L1Q9NZI6 479 aa15.53■□□□□ 0.08
SNRNP200-207ENST00000493271 RTL1A6NKG5 1358 aa15.52■□□□□ 0.08
SNRNP200-207ENST00000493271 CGNL1Q0VF96 1302 aa15.52■□□□□ 0.08
SNRNP200-207ENST00000493271 HOXC9P31274 260 aa15.51■□□□□ 0.07
SNRNP200-207ENST00000493271 SYTL4Q96C24 671 aaPredicted RBP15.51■□□□□ 0.07
SNRNP200-207ENST00000493271 LY75O60449 1722 aa15.51■□□□□ 0.07
SNRNP200-207ENST00000493271 TONSLQ96HA7 1378 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 185.2 ms