RNA–Protein interactions for RNA: ENST00000490262.1

SREBF2-207, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 2

Gene SREBF2, Length 450 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-207ENST00000490262 LRP5O75197 1615 aa16.76■□□□□ 0.27
SREBF2-207ENST00000490262 PARD3Q8TEW0 1356 aa16.76■□□□□ 0.27
SREBF2-207ENST00000490262 CD163L1Q9NR16 1453 aa16.75■□□□□ 0.27
SREBF2-207ENST00000490262 TRIM26Q12899 539 aaPredicted RBP16.75■□□□□ 0.27
SREBF2-207ENST00000490262 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.75■□□□□ 0.27
SREBF2-207ENST00000490262 TMC1Q8TDI8 760 aa16.75■□□□□ 0.27
SREBF2-207ENST00000490262 NFAT5O94916 1531 aa16.75■□□□□ 0.27
SREBF2-207ENST00000490262 C11orf95C9JLR9 678 aaPredicted RBP16.74■□□□□ 0.27
SREBF2-207ENST00000490262 DDB1Q16531 1140 aa16.74■□□□□ 0.27
SREBF2-207ENST00000490262 SLC12A5Q9H2X9 1139 aa16.74■□□□□ 0.27
SREBF2-207ENST00000490262 USP31Q70CQ4 1352 aa16.74■□□□□ 0.27
SREBF2-207ENST00000490262 LRRC37A3O60309 1634 aa16.74■□□□□ 0.27
SREBF2-207ENST00000490262 CSB-PGBD3P0DP91 1061 aa16.73■□□□□ 0.27
SREBF2-207ENST00000490262 HDGFL2Q7Z4V5 671 aaPredicted RBP16.73■□□□□ 0.27
SREBF2-207ENST00000490262 PEAK1Q9H792 1746 aa16.73■□□□□ 0.27
SREBF2-207ENST00000490262 WNK3Q9BYP7 1800 aa16.73■□□□□ 0.27
SREBF2-207ENST00000490262 OVOS2A0A0G2JMS6 1433 aa16.72■□□□□ 0.27
SREBF2-207ENST00000490262 OVOS2A0A0J9YW53 1432 aa16.72■□□□□ 0.27
SREBF2-207ENST00000490262 OVOS2Q6IE36 1432 aa16.72■□□□□ 0.27
SREBF2-207ENST00000490262 NME9Q86XW9 330 aa16.72■□□□□ 0.27
SREBF2-207ENST00000490262 PUS7Q96PZ0 661 aaKnown RBP16.72■□□□□ 0.27
SREBF2-207ENST00000490262 CDCA7Q9BWT1 371 aaPredicted RBP16.72■□□□□ 0.27
SREBF2-207ENST00000490262 CARD10Q9BWT7 1032 aa16.72■□□□□ 0.27
SREBF2-207ENST00000490262 RREB1Q92766 1687 aa16.72■□□□□ 0.27
SREBF2-207ENST00000490262 TERF2IPQ9NYB0 399 aa16.71■□□□□ 0.27
SREBF2-207ENST00000490262 USP54Q70EL1 1684 aa16.71■□□□□ 0.27
SREBF2-207ENST00000490262 SBF2Q86WG5 1849 aa16.7■□□□□ 0.26
SREBF2-207ENST00000490262 ABCC6O95255 1503 aa16.7■□□□□ 0.26
SREBF2-207ENST00000490262 EDC4Q6P2E9 1401 aaKnown RBP16.7■□□□□ 0.26
SREBF2-207ENST00000490262 A0A1W2PP64 1363 aa16.69■□□□□ 0.26
SREBF2-207ENST00000490262 ST20-MTHFSA0A0A6YYL1 179 aa16.69■□□□□ 0.26
SREBF2-207ENST00000490262 TESK2Q96S53 571 aa16.69■□□□□ 0.26
SREBF2-207ENST00000490262 NUP188Q5SRE5 1749 aa16.69■□□□□ 0.26
SREBF2-207ENST00000490262 MARCH10Q8NA82 808 aaPredicted RBP16.68■□□□□ 0.26
SREBF2-207ENST00000490262 CCDC7Q96M83 1385 aa16.67■□□□□ 0.26
SREBF2-207ENST00000490262 LTN1O94822 1766 aa16.67■□□□□ 0.26
SREBF2-207ENST00000490262 NBPF14Q5TI25 921 aa16.67■□□□□ 0.26
SREBF2-207ENST00000490262 EXOC5O00471 708 aa16.66■□□□□ 0.26
SREBF2-207ENST00000490262 SLC24A1O60721 1099 aa16.66■□□□□ 0.26
SREBF2-207ENST00000490262 BCL11BQ9C0K0 894 aaPredicted RBP16.66■□□□□ 0.26
SREBF2-207ENST00000490262 BCL9O00512 1426 aa16.65■□□□□ 0.26
SREBF2-207ENST00000490262 PLSCR1O15162 318 aa16.65■□□□□ 0.26
SREBF2-207ENST00000490262 PTF1AQ7RTS3 328 aa16.65■□□□□ 0.26
SREBF2-207ENST00000490262 ERBB3P21860 1342 aa16.65■□□□□ 0.26
SREBF2-207ENST00000490262 NINLQ9Y2I6 1382 aa16.64■□□□□ 0.26
SREBF2-207ENST00000490262 NLRP2Q9NX02 1062 aa16.64■□□□□ 0.25
SREBF2-207ENST00000490262 RGPD3A6NKT7 1758 aaPredicted RBP16.64■□□□□ 0.25
SREBF2-207ENST00000490262 RGPD4Q7Z3J3 1758 aa16.64■□□□□ 0.25
SREBF2-207ENST00000490262 ANKRD24Q8TF21 1146 aa16.62■□□□□ 0.25
SREBF2-207ENST00000490262 TNS2Q63HR2 1409 aa16.62■□□□□ 0.25
SREBF2-207ENST00000490262 IL2RBP14784 551 aa16.6■□□□□ 0.25
SREBF2-207ENST00000490262 IP6K1Q92551 441 aa16.6■□□□□ 0.25
SREBF2-207ENST00000490262 COG3Q96JB2 828 aa16.6■□□□□ 0.25
SREBF2-207ENST00000490262 TMF1P82094 1093 aa16.59■□□□□ 0.25
SREBF2-207ENST00000490262 PROM2Q8N271 834 aa16.59■□□□□ 0.25
SREBF2-207ENST00000490262 USP47Q96K76 1375 aa16.59■□□□□ 0.25
SREBF2-207ENST00000490262 ANKRD36BQ8N2N9 1353 aa16.58■□□□□ 0.24
SREBF2-207ENST00000490262 KCNQ2O43526 872 aa16.57■□□□□ 0.24
SREBF2-207ENST00000490262 TXNRD1Q16881 649 aa16.56■□□□□ 0.24
SREBF2-207ENST00000490262 LTV1Q96GA3 475 aaPredicted RBP16.56■□□□□ 0.24
SREBF2-207ENST00000490262 ANO8Q9HCE9 1232 aaPredicted RBP16.56■□□□□ 0.24
SREBF2-207ENST00000490262 MAP3K19Q56UN5 1328 aa16.55■□□□□ 0.24
SREBF2-207ENST00000490262 FBLN1P23142 703 aa16.55■□□□□ 0.24
SREBF2-207ENST00000490262 SPON1Q9HCB6 807 aa16.55■□□□□ 0.24
SREBF2-207ENST00000490262 NHSQ6T4R5 1651 aa16.55■□□□□ 0.24
SREBF2-207ENST00000490262 FAM208AQ9UK61 1670 aaKnown RBP16.54■□□□□ 0.24
SREBF2-207ENST00000490262 HOXC9P31274 260 aa16.54■□□□□ 0.24
SREBF2-207ENST00000490262 ACSBG1Q96GR2 724 aa16.54■□□□□ 0.24
SREBF2-207ENST00000490262 KAT6BQ8WYB5 2073 aa16.54■□□□□ 0.24
SREBF2-207ENST00000490262 FYB1O15117 783 aa16.53■□□□□ 0.24
SREBF2-207ENST00000490262 AMPHP49418 695 aa16.53■□□□□ 0.24
SREBF2-207ENST00000490262 CDCA8Q53HL2 280 aa16.53■□□□□ 0.24
SREBF2-207ENST00000490262 TIMELESSQ9UNS1 1208 aa16.53■□□□□ 0.24
SREBF2-207ENST00000490262 GGNBP2Q9H3C7 697 aa16.52■□□□□ 0.24
SREBF2-207ENST00000490262 CASZ1Q86V15 1759 aa16.51■□□□□ 0.23
SREBF2-207ENST00000490262 PPP1R1BQ9UD71 204 aaPredicted RBP16.51■□□□□ 0.23
SREBF2-207ENST00000490262 RGPD2P0DJD1 1756 aa16.51■□□□□ 0.23
SREBF2-207ENST00000490262 DDX54Q8TDD1 881 aaKnown RBP16.5■□□□□ 0.23
SREBF2-207ENST00000490262 PCGF6Q9BYE7 350 aa16.5■□□□□ 0.23
SREBF2-207ENST00000490262 PDGFDQ9GZP0 370 aaPredicted RBP16.5■□□□□ 0.23
SREBF2-207ENST00000490262 STK32BQ9NY57 414 aa16.5■□□□□ 0.23
SREBF2-207ENST00000490262 BTAF1O14981 1849 aa16.49■□□□□ 0.23
SREBF2-207ENST00000490262 CLSPNQ9HAW4 1339 aa16.49■□□□□ 0.23
SREBF2-207ENST00000490262 RRS1Q15050 365 aaKnown RBP16.49■□□□□ 0.23
SREBF2-207ENST00000490262 SLC15A2Q16348 729 aa16.49■□□□□ 0.23
SREBF2-207ENST00000490262 RTL1A6NKG5 1358 aa16.49■□□□□ 0.23
SREBF2-207ENST00000490262 KIF20BQ96Q89 1820 aa16.47■□□□□ 0.23
SREBF2-207ENST00000490262 ZBTB7AO95365 584 aa16.46■□□□□ 0.23
SREBF2-207ENST00000490262 NBPF6Q5VWK0 638 aa16.46■□□□□ 0.23
SREBF2-207ENST00000490262 NBPF4Q96M43 638 aa16.46■□□□□ 0.23
SREBF2-207ENST00000490262 ZCRB1Q8TBF4 217 aaKnown RBP16.45■□□□□ 0.22
SREBF2-207ENST00000490262 CARD14Q9BXL6 1004 aa16.45■□□□□ 0.22
SREBF2-207ENST00000490262 MYOM1P52179 1685 aa16.45■□□□□ 0.22
SREBF2-207ENST00000490262 MEGF6O75095 1541 aa16.45■□□□□ 0.22
SREBF2-207ENST00000490262 ATF5Q9Y2D1 282 aaPredicted RBP16.44■□□□□ 0.22
SREBF2-207ENST00000490262 SHANK3Q9BYB0 1731 aa16.44■□□□□ 0.22
SREBF2-207ENST00000490262 SMG6Q86US8 1419 aaKnown RBP16.44■□□□□ 0.22
SREBF2-207ENST00000490262 PTGER2P43116 358 aa16.43■□□□□ 0.22
SREBF2-207ENST00000490262 HSP90AB2PQ58FF8 381 aa16.43■□□□□ 0.22
SREBF2-207ENST00000490262 USHBP1Q8N6Y0 703 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms