RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-208ENST00000489816 NUTM2GQ5VZR2 741 aa19.81■□□□□ 0.76
BRD9-208ENST00000489816 SMC5Q8IY18 1101 aa19.8■□□□□ 0.76
BRD9-208ENST00000489816 MRPL50Q8N5N7 158 aaKnown RBP19.8■□□□□ 0.76
BRD9-208ENST00000489816 MAP2P11137 1827 aaKnown RBP19.8■□□□□ 0.76
BRD9-208ENST00000489816 LTKP29376 864 aa19.79■□□□□ 0.76
BRD9-208ENST00000489816 GNAI1P63096 354 aa19.79■□□□□ 0.76
BRD9-208ENST00000489816 ZBTB7BO15156 539 aaPredicted RBP19.79■□□□□ 0.76
BRD9-208ENST00000489816 FOXD4L1Q9NU39 408 aa19.79■□□□□ 0.76
BRD9-208ENST00000489816 CHD1LQ86WJ1 897 aa19.78■□□□□ 0.76
BRD9-208ENST00000489816 GZF1Q9H116 711 aaPredicted RBP19.78■□□□□ 0.76
BRD9-208ENST00000489816 FAM135BQ49AJ0 1406 aa19.78■□□□□ 0.76
BRD9-208ENST00000489816 FOXO3O43524 673 aa19.77■□□□□ 0.76
BRD9-208ENST00000489816 ACEP12821 1306 aa19.77■□□□□ 0.76
BRD9-208ENST00000489816 EIF4A2Q14240 407 aaKnown RBP19.77■□□□□ 0.76
BRD9-208ENST00000489816 CPS1P31327 1500 aa19.77■□□□□ 0.76
BRD9-208ENST00000489816 ALDH1L2Q3SY69 923 aa19.77■□□□□ 0.75
BRD9-208ENST00000489816 ROBO2Q9HCK4 1378 aa19.76■□□□□ 0.75
BRD9-208ENST00000489816 SIRT2Q8IXJ6 389 aa19.76■□□□□ 0.75
BRD9-208ENST00000489816 RBM33Q96EV2 1170 aaKnown RBP19.76■□□□□ 0.75
BRD9-208ENST00000489816 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.76■□□□□ 0.75
BRD9-208ENST00000489816 NCBP3Q53F19 620 aaKnown RBP19.75■□□□□ 0.75
BRD9-208ENST00000489816 NUCB1Q02818 461 aa19.75■□□□□ 0.75
BRD9-208ENST00000489816 NECTIN2Q92692 538 aa19.74■□□□□ 0.75
BRD9-208ENST00000489816 IFT57Q9NWB7 429 aa19.74■□□□□ 0.75
BRD9-208ENST00000489816 CFAP44Q96MT7 982 aa19.74■□□□□ 0.75
BRD9-208ENST00000489816 EDC4Q6P2E9 1401 aaKnown RBP19.73■□□□□ 0.75
BRD9-208ENST00000489816 C16orf71Q8IYS4 520 aaPredicted RBP19.73■□□□□ 0.75
BRD9-208ENST00000489816 MED14O60244 1454 aa19.73■□□□□ 0.75
BRD9-208ENST00000489816 DIP2BQ9P265 1576 aa19.72■□□□□ 0.75
BRD9-208ENST00000489816 CPSF1Q10570 1443 aaKnown RBP19.72■□□□□ 0.75
BRD9-208ENST00000489816 RIMBP3CA6NJZ7 1639 aa19.72■□□□□ 0.75
BRD9-208ENST00000489816 RIMBP3BA6NNM3 1639 aa19.72■□□□□ 0.75
BRD9-208ENST00000489816 RIMBP3Q9UFD9 1639 aa19.72■□□□□ 0.75
BRD9-208ENST00000489816 ANTXR1Q9H6X2 564 aa19.72■□□□□ 0.75
BRD9-208ENST00000489816 TTC21BQ7Z4L5 1316 aa19.72■□□□□ 0.75
BRD9-208ENST00000489816 LTV1Q96GA3 475 aaPredicted RBP19.71■□□□□ 0.75
BRD9-208ENST00000489816 HDGFP51858 240 aaKnown RBP19.71■□□□□ 0.75
BRD9-208ENST00000489816 CALD1Q05682 793 aaKnown RBP19.71■□□□□ 0.75
BRD9-208ENST00000489816 RBM42Q9BTD8 480 aaKnown RBP19.71■□□□□ 0.75
BRD9-208ENST00000489816 ZNF853P0CG23 659 aa19.7■□□□□ 0.74
BRD9-208ENST00000489816 SLC4A10Q6U841 1118 aa19.7■□□□□ 0.74
BRD9-208ENST00000489816 PPP6R1Q9UPN7 881 aa19.7■□□□□ 0.74
BRD9-208ENST00000489816 ATP7BP35670 1465 aa19.7■□□□□ 0.74
BRD9-208ENST00000489816 C14orf37Q86TY3 774 aa19.69■□□□□ 0.74
BRD9-208ENST00000489816 NGDNQ8NEJ9 315 aaKnown RBP19.69■□□□□ 0.74
BRD9-208ENST00000489816 TNRQ92752 1358 aa19.69■□□□□ 0.74
BRD9-208ENST00000489816 ZNF692Q9BU19 519 aaPredicted RBP19.68■□□□□ 0.74
BRD9-208ENST00000489816 KIF20BQ96Q89 1820 aa19.68■□□□□ 0.74
BRD9-208ENST00000489816 F6X3S4 739 aa19.68■□□□□ 0.74
BRD9-208ENST00000489816 SMARCA5O60264 1052 aaPredicted RBP19.68■□□□□ 0.74
BRD9-208ENST00000489816 OTUD7AQ8TE49 926 aaPredicted RBP19.68■□□□□ 0.74
BRD9-208ENST00000489816 AMOTL2Q9Y2J4 779 aa19.67■□□□□ 0.74
BRD9-208ENST00000489816 ZBTB7CA1YPR0 619 aa19.67■□□□□ 0.74
BRD9-208ENST00000489816 LMOD3Q0VAK6 560 aa19.66■□□□□ 0.74
BRD9-208ENST00000489816 SLC4A2P04920 1241 aa19.65■□□□□ 0.74
BRD9-208ENST00000489816 TMEM2Q9UHN6 1383 aa19.65■□□□□ 0.74
BRD9-208ENST00000489816 ANKRD26Q9UPS8 1709 aa19.65■□□□□ 0.74
BRD9-208ENST00000489816 HSCBQ8IWL3 235 aa19.65■□□□□ 0.74
BRD9-208ENST00000489816 CD2BP2O95400 341 aaKnown RBP19.64■□□□□ 0.73
BRD9-208ENST00000489816 AMPHP49418 695 aa19.64■□□□□ 0.73
BRD9-208ENST00000489816 TBC1D9Q6ZT07 1266 aa19.64■□□□□ 0.73
BRD9-208ENST00000489816 SPATA31D1Q6ZQQ2 1576 aa19.64■□□□□ 0.73
BRD9-208ENST00000489816 G2E3Q7L622 706 aa19.64■□□□□ 0.73
BRD9-208ENST00000489816 VIRMAQ69YN4 1812 aaKnown RBP19.63■□□□□ 0.73
BRD9-208ENST00000489816 HSP90AA1P07900 732 aaKnown RBP19.63■□□□□ 0.73
BRD9-208ENST00000489816 MEIS3Q99687 375 aa19.63■□□□□ 0.73
BRD9-208ENST00000489816 MAP3K19Q56UN5 1328 aa19.63■□□□□ 0.73
BRD9-208ENST00000489816 API5Q9BZZ5 524 aaKnown RBP19.63■□□□□ 0.73
BRD9-208ENST00000489816 MTHFSDQ2M296 383 aaKnown RBP19.63■□□□□ 0.73
BRD9-208ENST00000489816 ABCC4O15439 1325 aa19.62■□□□□ 0.73
BRD9-208ENST00000489816 ZNF428Q96B54 188 aa19.62■□□□□ 0.73
BRD9-208ENST00000489816 ARHGAP45Q92619 1136 aa19.61■□□□□ 0.73
BRD9-208ENST00000489816 NLRP6P59044 892 aa19.61■□□□□ 0.73
BRD9-208ENST00000489816 EID1Q9Y6B2 187 aa19.61■□□□□ 0.73
BRD9-208ENST00000489816 NRXN3Q9Y4C0 1643 aa19.61■□□□□ 0.73
BRD9-208ENST00000489816 HSP90AB1P08238 724 aaKnown RBP19.6■□□□□ 0.73
BRD9-208ENST00000489816 GCC1Q96CN9 775 aa19.6■□□□□ 0.73
BRD9-208ENST00000489816 TSPYL4Q9UJ04 414 aa19.6■□□□□ 0.73
BRD9-208ENST00000489816 CDK12Q9NYV4 1490 aaPredicted RBP19.6■□□□□ 0.73
BRD9-208ENST00000489816 AATKQ6ZMQ8 1374 aa19.6■□□□□ 0.73
BRD9-208ENST00000489816 USHBP1Q8N6Y0 703 aa19.6■□□□□ 0.73
BRD9-208ENST00000489816 RTF1Q92541 710 aaKnown RBP19.6■□□□□ 0.73
BRD9-208ENST00000489816 DLC1Q96QB1 1528 aa19.6■□□□□ 0.73
BRD9-208ENST00000489816 BMP2KLQ5H9B9 411 aa19.59■□□□□ 0.73
BRD9-208ENST00000489816 GSPT1P15170 499 aaKnown RBP19.59■□□□□ 0.73
BRD9-208ENST00000489816 TSHZ3Q63HK5 1081 aa19.59■□□□□ 0.73
BRD9-208ENST00000489816 AGLP35573 1532 aa19.59■□□□□ 0.73
BRD9-208ENST00000489816 CHL1O00533 1208 aa19.58■□□□□ 0.73
BRD9-208ENST00000489816 BRPF1P55201 1214 aaPredicted RBP19.58■□□□□ 0.73
BRD9-208ENST00000489816 EYA1Q99502 592 aa19.57■□□□□ 0.72
BRD9-208ENST00000489816 ADAMTS13Q76LX8 1427 aa19.57■□□□□ 0.72
BRD9-208ENST00000489816 MCM4P33991 863 aa19.57■□□□□ 0.72
BRD9-208ENST00000489816 SETD1AO15047 1707 aaKnown RBP19.56■□□□□ 0.72
BRD9-208ENST00000489816 PLEKHM2Q8IWE5 1019 aa19.56■□□□□ 0.72
BRD9-208ENST00000489816 CHMP5Q9NZZ3 219 aa19.56■□□□□ 0.72
BRD9-208ENST00000489816 DLG5Q8TDM6 1919 aa19.56■□□□□ 0.72
BRD9-208ENST00000489816 PTCH1Q13635 1447 aa19.55■□□□□ 0.72
BRD9-208ENST00000489816 KIF2CQ99661 725 aa19.55■□□□□ 0.72
BRD9-208ENST00000489816 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.55■□□□□ 0.72
BRD9-208ENST00000489816 CDC42BPGQ6DT37 1551 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms