RNA–Protein interactions for RNA: ENST00000488249.1

RBM28-207, Transcript of RNA binding motif protein 28, humanhuman

TSL 3

Gene RBM28, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-207ENST00000488249 FSHRP23945 695 aa6.59□□□□□ -1.35
RBM28-207ENST00000488249 EIF4G2P78344 907 aaKnown RBP eCLIP6.59□□□□□ -1.35
RBM28-207ENST00000488249 NNTQ13423 1086 aa6.59□□□□□ -1.35
RBM28-207ENST00000488249 NBPF20Q3BBV1 942 aa6.59□□□□□ -1.35
RBM28-207ENST00000488249 Q6ZNB5 142 aa6.59□□□□□ -1.35
RBM28-207ENST00000488249 HPS1Q92902 700 aa6.59□□□□□ -1.35
RBM28-207ENST00000488249 NR3C2P08235 984 aa6.58□□□□□ -1.36
RBM28-207ENST00000488249 PROSER2Q86WR7 435 aaPredicted RBP6.58□□□□□ -1.36
RBM28-207ENST00000488249 FNBP4Q8N3X1 1017 aaPredicted RBP6.58□□□□□ -1.36
RBM28-207ENST00000488249 ESPNB1AK53 854 aa6.57□□□□□ -1.36
RBM28-207ENST00000488249 INTS6LQ5JSJ4 861 aaKnown RBP6.57□□□□□ -1.36
RBM28-207ENST00000488249 GIGYF1O75420 1035 aaPredicted RBP6.56□□□□□ -1.36
RBM28-207ENST00000488249 SOX11P35716 441 aa6.56□□□□□ -1.36
RBM28-207ENST00000488249 MYT1Q01538 1121 aa6.56□□□□□ -1.36
RBM28-207ENST00000488249 CTC1Q2NKJ3 1217 aa6.56□□□□□ -1.36
RBM28-207ENST00000488249 SEPT12Q8IYM1 358 aa6.56□□□□□ -1.36
RBM28-207ENST00000488249 CCDC116Q8IYX3 515 aa6.56□□□□□ -1.36
RBM28-207ENST00000488249 CEP126Q9P2H0 1117 aa6.56□□□□□ -1.36
RBM28-207ENST00000488249 SMCPP49901 116 aaPredicted RBP6.55□□□□□ -1.36
RBM28-207ENST00000488249 DHX9Q08211 1270 aaKnown RBP6.55□□□□□ -1.36
RBM28-207ENST00000488249 SEMA3FQ13275 785 aa6.55□□□□□ -1.36
RBM28-207ENST00000488249 TRAF7Q6Q0C0 670 aa6.55□□□□□ -1.36
RBM28-207ENST00000488249 CRIPAKQ8N1N5 446 aa6.55□□□□□ -1.36
RBM28-207ENST00000488249 KLF16Q9BXK1 252 aaPredicted RBP6.55□□□□□ -1.36
RBM28-207ENST00000488249 ZMYND15Q9H091 742 aa6.55□□□□□ -1.36
RBM28-207ENST00000488249 POM121CA8CG34 1229 aa6.54□□□□□ -1.36
RBM28-207ENST00000488249 LCE2BO14633 110 aa6.54□□□□□ -1.36
RBM28-207ENST00000488249 AXIN1O15169 862 aa6.54□□□□□ -1.36
RBM28-207ENST00000488249 TIMP2P16035 220 aa6.54□□□□□ -1.36
RBM28-207ENST00000488249 WDR4P57081 412 aaKnown RBP6.54□□□□□ -1.36
RBM28-207ENST00000488249 RAB15P59190 212 aa6.54□□□□□ -1.36
RBM28-207ENST00000488249 PPP1R26Q5T8A7 1209 aaPredicted RBP6.54□□□□□ -1.36
RBM28-207ENST00000488249 RNF20Q5VTR2 975 aa6.54□□□□□ -1.36
RBM28-207ENST00000488249 ALG2Q9H553 416 aa6.54□□□□□ -1.36
RBM28-207ENST00000488249 EMILIN1Q9Y6C2 1016 aa6.54□□□□□ -1.36
RBM28-207ENST00000488249 ERVH48-1M5A8F1 160 aa6.53□□□□□ -1.36
RBM28-207ENST00000488249 ST8SIA5O15466 376 aa6.53□□□□□ -1.36
RBM28-207ENST00000488249 CAPN5O15484 640 aaPredicted RBP6.53□□□□□ -1.36
RBM28-207ENST00000488249 ZIC2O95409 532 aaPredicted RBP6.53□□□□□ -1.36
RBM28-207ENST00000488249 CCDC125Q86Z20 511 aa6.53□□□□□ -1.36
RBM28-207ENST00000488249 ITPKCQ96DU7 683 aa6.53□□□□□ -1.36
RBM28-207ENST00000488249 AAASQ9NRG9 546 aa6.53□□□□□ -1.36
RBM28-207ENST00000488249 TRAK2O60296 914 aa6.52□□□□□ -1.37
RBM28-207ENST00000488249 C14orf37Q86TY3 774 aa6.52□□□□□ -1.37
RBM28-207ENST00000488249 ZFAND3Q9H8U3 227 aa6.52□□□□□ -1.37
RBM28-207ENST00000488249 TMPRSS4Q9NRS4 437 aa6.52□□□□□ -1.37
RBM28-207ENST00000488249 PGPEP1Q9NXJ5 209 aa6.52□□□□□ -1.37
RBM28-207ENST00000488249 SLFNL1Q499Z3 407 aa6.51□□□□□ -1.37
RBM28-207ENST00000488249 HDGFL1Q5TGJ6 251 aa6.51□□□□□ -1.37
RBM28-207ENST00000488249 PHTF2Q8N3S3 785 aa6.51□□□□□ -1.37
RBM28-207ENST00000488249 ADAMTS19Q8TE59 1207 aa6.51□□□□□ -1.37
RBM28-207ENST00000488249 RNF135Q8IUD6 432 aa6.5□□□□□ -1.37
RBM28-207ENST00000488249 ZNF784Q8NCA9 323 aaPredicted RBP6.49□□□□□ -1.37
RBM28-207ENST00000488249 TRIM52Q96A61 297 aa6.49□□□□□ -1.37
RBM28-207ENST00000488249 CCDC85AQ96PX6 553 aaPredicted RBP6.49□□□□□ -1.37
RBM28-207ENST00000488249 DACH1Q9UI36 760 aa6.49□□□□□ -1.37
RBM28-207ENST00000488249 CHIC2Q9UKJ5 165 aa6.49□□□□□ -1.37
RBM28-207ENST00000488249 ZNF777Q9ULD5 760 aaPredicted RBP6.49□□□□□ -1.37
RBM28-207ENST00000488249 PCDHB11Q9Y5F2 797 aa6.49□□□□□ -1.37
RBM28-207ENST00000488249 LILRA1O75019 489 aa6.48□□□□□ -1.37
RBM28-207ENST00000488249 CBLBQ13191 982 aa6.48□□□□□ -1.37
RBM28-207ENST00000488249 TSGA10IPQ3SY00 556 aa6.48□□□□□ -1.37
RBM28-207ENST00000488249 ERICH6Q7L0X2 663 aa6.48□□□□□ -1.37
RBM28-207ENST00000488249 GLMNQ92990 594 aa6.48□□□□□ -1.37
RBM28-207ENST00000488249 CYLDQ9NQC7 956 aa6.48□□□□□ -1.37
RBM28-207ENST00000488249 PIK3CDO00329 1044 aa6.47□□□□□ -1.37
RBM28-207ENST00000488249 ADD1P35611 737 aaKnown RBP6.47□□□□□ -1.37
RBM28-207ENST00000488249 Q6ZVU0 165 aa6.47□□□□□ -1.37
RBM28-207ENST00000488249 MEIOBQ8N635 442 aa6.47□□□□□ -1.37
RBM28-207ENST00000488249 CALR3Q96L12 384 aaKnown RBP6.47□□□□□ -1.37
RBM28-207ENST00000488249 CDCA7Q9BWT1 371 aaPredicted RBP6.47□□□□□ -1.37
RBM28-207ENST00000488249 ATP13A2Q9NQ11 1180 aa6.47□□□□□ -1.37
RBM28-207ENST00000488249 BMP1P13497 986 aa6.46□□□□□ -1.38
RBM28-207ENST00000488249 ERVK-9P63128 1117 aa6.46□□□□□ -1.38
RBM28-207ENST00000488249 MAP7D1Q3KQU3 841 aa6.46□□□□□ -1.38
RBM28-207ENST00000488249 CC2D2BQ6DHV5 1058 aa6.46□□□□□ -1.38
RBM28-207ENST00000488249 MRPL14Q6P1L8 145 aaKnown RBP6.46□□□□□ -1.38
RBM28-207ENST00000488249 TRIM46Q7Z4K8 759 aa6.46□□□□□ -1.38
RBM28-207ENST00000488249 PLPP7Q8NBV4 271 aa6.46□□□□□ -1.38
RBM28-207ENST00000488249 NFATC2IPQ8NCF5 419 aa6.46□□□□□ -1.38
RBM28-207ENST00000488249 DOLKQ9UPQ8 538 aa6.46□□□□□ -1.38
RBM28-207ENST00000488249 SKIP12755 728 aa6.45□□□□□ -1.38
RBM28-207ENST00000488249 SCTRP47872 440 aa6.45□□□□□ -1.38
RBM28-207ENST00000488249 UCN2Q96RP3 112 aa6.45□□□□□ -1.38
RBM28-207ENST00000488249 TSEN34Q9BSV6 310 aaKnown RBP6.45□□□□□ -1.38
RBM28-207ENST00000488249 UPP2O95045 317 aa6.44□□□□□ -1.38
RBM28-207ENST00000488249 ADH1AP07327 375 aa6.44□□□□□ -1.38
RBM28-207ENST00000488249 USP4Q13107 963 aa6.44□□□□□ -1.38
RBM28-207ENST00000488249 SCARF1Q14162 830 aa6.44□□□□□ -1.38
RBM28-207ENST00000488249 OXLD1Q5BKU9 147 aa6.44□□□□□ -1.38
RBM28-207ENST00000488249 LINC00528Q8N1L1 170 aa6.44□□□□□ -1.38
RBM28-207ENST00000488249 ESF1Q9H501 851 aaKnown RBP6.44□□□□□ -1.38
RBM28-207ENST00000488249 MYCP01106 439 aaPredicted RBP6.43□□□□□ -1.38
RBM28-207ENST00000488249 C6orf118Q5T5N4 469 aa6.43□□□□□ -1.38
RBM28-207ENST00000488249 TBC1D9Q6ZT07 1266 aa6.43□□□□□ -1.38
RBM28-207ENST00000488249 KDF1Q8NAX2 398 aaPredicted RBP6.43□□□□□ -1.38
RBM28-207ENST00000488249 AGBL1Q96MI9 1066 aa6.43□□□□□ -1.38
RBM28-207ENST00000488249 ZFP42Q96MM3 310 aa6.43□□□□□ -1.38
RBM28-207ENST00000488249 PURBQ96QR8 312 aaKnown RBP6.43□□□□□ -1.38
RBM28-207ENST00000488249 OSBPL3Q9H4L5 887 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms