RNA–Protein interactions for RNA: ENST00000485136.5

CNOT10-217, Transcript of CCR4-NOT transcription complex subunit 10, humanhuman

TSL 2

Gene CNOT10, Length 608 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT10-217ENST00000485136 PLPP7Q8NBV4 271 aa11.65□□□□□ -0.54
CNOT10-217ENST00000485136 SLC10A4Q96EP9 437 aa11.65□□□□□ -0.54
CNOT10-217ENST00000485136 TRIM32Q13049 653 aa11.64□□□□□ -0.55
CNOT10-217ENST00000485136 DEPDC4Q8N2C3 294 aa11.64□□□□□ -0.55
CNOT10-217ENST00000485136 C1QTNF2Q9BXJ5 285 aa11.64□□□□□ -0.55
CNOT10-217ENST00000485136 USTQ9Y2C2 406 aa11.64□□□□□ -0.55
CNOT10-217ENST00000485136 PPP1R18Q6NYC8 613 aa11.63□□□□□ -0.55
CNOT10-217ENST00000485136 NCOA4Q13772 614 aa11.62□□□□□ -0.55
CNOT10-217ENST00000485136 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.62□□□□□ -0.55
CNOT10-217ENST00000485136 CHIC2Q9UKJ5 165 aa11.62□□□□□ -0.55
CNOT10-217ENST00000485136 ZBTB7CA1YPR0 619 aa11.61□□□□□ -0.55
CNOT10-217ENST00000485136 MAP7D1Q3KQU3 841 aa11.61□□□□□ -0.55
CNOT10-217ENST00000485136 PODXL2Q9NZ53 605 aa11.61□□□□□ -0.55
CNOT10-217ENST00000485136 LZTS3O60299 673 aaPredicted RBP11.6□□□□□ -0.55
CNOT10-217ENST00000485136 GIGYF1O75420 1035 aaPredicted RBP11.6□□□□□ -0.55
CNOT10-217ENST00000485136 NBPF20Q3BBV1 942 aa11.6□□□□□ -0.55
CNOT10-217ENST00000485136 TRMT44Q8IYL2 757 aaKnown RBP11.6□□□□□ -0.55
CNOT10-217ENST00000485136 KCTD17Q8N5Z5 321 aa11.6□□□□□ -0.55
CNOT10-217ENST00000485136 MKRN1Q9UHC7 482 aaKnown RBP11.6□□□□□ -0.55
CNOT10-217ENST00000485136 WNT7BP56706 349 aa11.59□□□□□ -0.55
CNOT10-217ENST00000485136 EML3Q32P44 896 aa11.59□□□□□ -0.55
CNOT10-217ENST00000485136 TRAF7Q6Q0C0 670 aa11.59□□□□□ -0.55
CNOT10-217ENST00000485136 CCDC85AQ96PX6 553 aaPredicted RBP11.59□□□□□ -0.55
CNOT10-217ENST00000485136 CDV3Q9UKY7 258 aaKnown RBP11.59□□□□□ -0.55
CNOT10-217ENST00000485136 DOLKQ9UPQ8 538 aa11.59□□□□□ -0.55
CNOT10-217ENST00000485136 RPIAP49247 311 aa11.58□□□□□ -0.56
CNOT10-217ENST00000485136 SKOR1P84550 965 aa11.58□□□□□ -0.56
CNOT10-217ENST00000485136 TSGA10IPQ3SY00 556 aa11.58□□□□□ -0.56
CNOT10-217ENST00000485136 RNF20Q5VTR2 975 aa11.58□□□□□ -0.56
CNOT10-217ENST00000485136 ATP5J2-PTCD1G3V325 749 aa11.57□□□□□ -0.56
CNOT10-217ENST00000485136 ELOAQ14241 798 aaKnown RBP11.57□□□□□ -0.56
CNOT10-217ENST00000485136 AEBP1Q8IUX7 1158 aa11.57□□□□□ -0.56
CNOT10-217ENST00000485136 CARNS1A5YM72 827 aa11.56□□□□□ -0.56
CNOT10-217ENST00000485136 FAM196BA6NMK8 535 aa11.56□□□□□ -0.56
CNOT10-217ENST00000485136 VARSP26640 1264 aaKnown RBP11.56□□□□□ -0.56
CNOT10-217ENST00000485136 ESPNB1AK53 854 aa11.55□□□□□ -0.56
CNOT10-217ENST00000485136 USP17L15C9J2P7 530 aa11.55□□□□□ -0.56
CNOT10-217ENST00000485136 USP17L10C9JJH3 530 aa11.55□□□□□ -0.56
CNOT10-217ENST00000485136 USP17L13C9JLJ4 530 aa11.55□□□□□ -0.56
CNOT10-217ENST00000485136 USP17L12C9JPN9 530 aa11.55□□□□□ -0.56
CNOT10-217ENST00000485136 USP17L11C9JVI0 530 aa11.55□□□□□ -0.56
CNOT10-217ENST00000485136 USP17L21D6R901 530 aa11.55□□□□□ -0.56
CNOT10-217ENST00000485136 USP17L18D6R9N7 530 aa11.55□□□□□ -0.56
CNOT10-217ENST00000485136 USP17L22D6RA61 530 aa11.55□□□□□ -0.56
CNOT10-217ENST00000485136 USP17L17D6RBQ6 530 aa11.55□□□□□ -0.56
CNOT10-217ENST00000485136 USP17L19D6RCP7 530 aa11.55□□□□□ -0.56
CNOT10-217ENST00000485136 USP17L20D6RJB6 530 aa11.55□□□□□ -0.56
CNOT10-217ENST00000485136 RASA1P20936 1047 aa11.55□□□□□ -0.56
CNOT10-217ENST00000485136 USP17L24Q0WX57 530 aa11.55□□□□□ -0.56
CNOT10-217ENST00000485136 OXLD1Q5BKU9 147 aa11.55□□□□□ -0.56
CNOT10-217ENST00000485136 LARP1Q6PKG0 1096 aaKnown RBP11.55□□□□□ -0.56
CNOT10-217ENST00000485136 ZMIZ1Q9ULJ6 1067 aa11.55□□□□□ -0.56
CNOT10-217ENST00000485136 NOVA2Q9UNW9 492 aaKnown RBP11.55□□□□□ -0.56
CNOT10-217ENST00000485136 TMEM88BA6NKF7 163 aa11.54□□□□□ -0.56
CNOT10-217ENST00000485136 CRTC2Q53ET0 693 aaPredicted RBP11.54□□□□□ -0.56
CNOT10-217ENST00000485136 IFFO2Q5TF58 517 aa11.54□□□□□ -0.56
CNOT10-217ENST00000485136 SEPT12Q8IYM1 358 aa11.54□□□□□ -0.56
CNOT10-217ENST00000485136 NOD1Q9Y239 953 aa11.54□□□□□ -0.56
CNOT10-217ENST00000485136 CD2BP2O95400 341 aaKnown RBP11.53□□□□□ -0.56
CNOT10-217ENST00000485136 TRIM50Q86XT4 487 aa11.53□□□□□ -0.56
CNOT10-217ENST00000485136 EHBP1Q8NDI1 1231 aa11.53□□□□□ -0.56
CNOT10-217ENST00000485136 STK32AQ8WU08 396 aa11.53□□□□□ -0.56
CNOT10-217ENST00000485136 KCTD15Q96SI1 283 aaPredicted RBP11.53□□□□□ -0.56
CNOT10-217ENST00000485136 PTK7Q13308 1070 aa11.52□□□□□ -0.57
CNOT10-217ENST00000485136 MAP4K5Q9Y4K4 846 aa11.52□□□□□ -0.57
CNOT10-217ENST00000485136 PCDHB11Q9Y5F2 797 aa11.52□□□□□ -0.57
CNOT10-217ENST00000485136 RAB15P59190 212 aa11.51□□□□□ -0.57
CNOT10-217ENST00000485136 TMEM164Q5U3C3 297 aa11.51□□□□□ -0.57
CNOT10-217ENST00000485136 LIAT1Q6ZQX7 453 aa11.51□□□□□ -0.57
CNOT10-217ENST00000485136 VASH1Q7L8A9 365 aaPredicted RBP11.51□□□□□ -0.57
CNOT10-217ENST00000485136 CCDC125Q86Z20 511 aa11.51□□□□□ -0.57
CNOT10-217ENST00000485136 OGFOD1Q8N543 542 aa11.51□□□□□ -0.57
CNOT10-217ENST00000485136 CDCA7Q9BWT1 371 aaPredicted RBP11.51□□□□□ -0.57
CNOT10-217ENST00000485136 BRD1O95696 1058 aa11.5□□□□□ -0.57
CNOT10-217ENST00000485136 ATP1A2P50993 1020 aa11.5□□□□□ -0.57
CNOT10-217ENST00000485136 RC3H1Q5TC82 1133 aaKnown RBP11.5□□□□□ -0.57
CNOT10-217ENST00000485136 CLDN10P78369 228 aa11.49□□□□□ -0.57
CNOT10-217ENST00000485136 ZNF594Q96JF6 807 aaPredicted RBP11.49□□□□□ -0.57
CNOT10-217ENST00000485136 DNAAF2Q9NVR5 837 aaKnown RBP11.49□□□□□ -0.57
CNOT10-217ENST00000485136 RGS20O76081 388 aa11.48□□□□□ -0.57
CNOT10-217ENST00000485136 ARID5BQ14865 1188 aa11.48□□□□□ -0.57
CNOT10-217ENST00000485136 INTS6LQ5JSJ4 861 aaKnown RBP11.48□□□□□ -0.57
CNOT10-217ENST00000485136 ANKMY2Q8IV38 441 aa11.48□□□□□ -0.57
CNOT10-217ENST00000485136 FAM200AQ8TCP9 573 aa11.48□□□□□ -0.57
CNOT10-217ENST00000485136 EMID1Q96A84 441 aaPredicted RBP11.48□□□□□ -0.57
CNOT10-217ENST00000485136 SIRT1Q96EB6 747 aa11.48□□□□□ -0.57
CNOT10-217ENST00000485136 GTF2IP78347 998 aa11.47□□□□□ -0.57
CNOT10-217ENST00000485136 USP4Q13107 963 aa11.47□□□□□ -0.57
CNOT10-217ENST00000485136 DPYDQ12882 1025 aa11.46□□□□□ -0.57
CNOT10-217ENST00000485136 LARGE2Q8N3Y3 721 aa11.46□□□□□ -0.57
CNOT10-217ENST00000485136 CDK15Q96Q40 435 aa11.46□□□□□ -0.57
CNOT10-217ENST00000485136 PATL2C9JE40 543 aaKnown RBP11.45□□□□□ -0.58
CNOT10-217ENST00000485136 SLC19A1P41440 591 aa11.45□□□□□ -0.58
CNOT10-217ENST00000485136 KCNA1Q09470 495 aa11.45□□□□□ -0.58
CNOT10-217ENST00000485136 KIAA1024Q9UPX6 916 aa11.45□□□□□ -0.58
CNOT10-217ENST00000485136 TLL2Q9Y6L7 1015 aa11.45□□□□□ -0.58
CNOT10-217ENST00000485136 ERVH48-1M5A8F1 160 aa11.44□□□□□ -0.58
CNOT10-217ENST00000485136 FSHRP23945 695 aa11.44□□□□□ -0.58
CNOT10-217ENST00000485136 SIX5Q8N196 739 aa11.44□□□□□ -0.58
CNOT10-217ENST00000485136 ZBTB7BO15156 539 aaPredicted RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms