RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 HSP90AB2PQ58FF8 381 aa18.39■□□□□ 0.53
CLK3-204ENST00000483723 CADPS2Q86UW7 1296 aa18.39■□□□□ 0.53
CLK3-204ENST00000483723 FOXO3O43524 673 aa18.38■□□□□ 0.53
CLK3-204ENST00000483723 FBXO41Q8TF61 875 aa18.37■□□□□ 0.53
CLK3-204ENST00000483723 HMOX1P09601 288 aa18.37■□□□□ 0.53
CLK3-204ENST00000483723 RIPK4P57078 832 aa18.36■□□□□ 0.53
CLK3-204ENST00000483723 NUTM2GQ5VZR2 741 aa18.36■□□□□ 0.53
CLK3-204ENST00000483723 KRT28Q7Z3Y7 464 aa18.36■□□□□ 0.53
CLK3-204ENST00000483723 PHACTR3Q96KR7 559 aa18.36■□□□□ 0.53
CLK3-204ENST00000483723 PPP4R2Q9NY27 417 aa18.36■□□□□ 0.53
CLK3-204ENST00000483723 NFAT5O94916 1531 aa18.36■□□□□ 0.53
CLK3-204ENST00000483723 IL16Q14005 1332 aa18.36■□□□□ 0.53
CLK3-204ENST00000483723 MSH6P52701 1360 aa18.35■□□□□ 0.53
CLK3-204ENST00000483723 NEFMP07197 916 aa18.35■□□□□ 0.53
CLK3-204ENST00000483723 NFE2L2Q16236 605 aa18.35■□□□□ 0.53
CLK3-204ENST00000483723 SOX12O15370 315 aa18.34■□□□□ 0.53
CLK3-204ENST00000483723 AMPHP49418 695 aa18.34■□□□□ 0.53
CLK3-204ENST00000483723 KCNH5Q8NCM2 988 aa18.34■□□□□ 0.53
CLK3-204ENST00000483723 PHRF1Q9P1Y6 1649 aaKnown RBP18.34■□□□□ 0.53
CLK3-204ENST00000483723 SLIT3O75094 1523 aa18.33■□□□□ 0.53
CLK3-204ENST00000483723 RTL1A6NKG5 1358 aa18.33■□□□□ 0.53
CLK3-204ENST00000483723 ARHGEF10O15013 1369 aa18.33■□□□□ 0.53
CLK3-204ENST00000483723 HOXC9P31274 260 aa18.33■□□□□ 0.52
CLK3-204ENST00000483723 ALS2Q96Q42 1657 aa18.32■□□□□ 0.52
CLK3-204ENST00000483723 MYH16Q9H6N6 1097 aa18.32■□□□□ 0.52
CLK3-204ENST00000483723 ZNF335Q9H4Z2 1342 aaPredicted RBP18.32■□□□□ 0.52
CLK3-204ENST00000483723 LTN1O94822 1766 aa18.32■□□□□ 0.52
CLK3-204ENST00000483723 SULT6B1Q6IMI4 303 aa18.32■□□□□ 0.52
CLK3-204ENST00000483723 USP19O94966 1318 aa18.31■□□□□ 0.52
CLK3-204ENST00000483723 DLG5Q8TDM6 1919 aa18.31■□□□□ 0.52
CLK3-204ENST00000483723 KDRP35968 1356 aa18.31■□□□□ 0.52
CLK3-204ENST00000483723 AEBP1Q8IUX7 1158 aa18.3■□□□□ 0.52
CLK3-204ENST00000483723 CERKQ8TCT0 537 aa18.3■□□□□ 0.52
CLK3-204ENST00000483723 IP6K1Q92551 441 aa18.3■□□□□ 0.52
CLK3-204ENST00000483723 IGSF1Q8N6C5 1336 aa18.3■□□□□ 0.52
CLK3-204ENST00000483723 XPCQ01831 940 aaPredicted RBP18.29■□□□□ 0.52
CLK3-204ENST00000483723 EYA1Q99502 592 aa18.29■□□□□ 0.52
CLK3-204ENST00000483723 NPHP3Q7Z494 1330 aa18.28■□□□□ 0.52
CLK3-204ENST00000483723 GCP02774 474 aa18.27■□□□□ 0.52
CLK3-204ENST00000483723 CT47B1P0C2W7 299 aaPredicted RBP18.26■□□□□ 0.51
CLK3-204ENST00000483723 LMOD3Q0VAK6 560 aa18.26■□□□□ 0.51
CLK3-204ENST00000483723 ARHGEF25Q86VW2 580 aa18.26■□□□□ 0.51
CLK3-204ENST00000483723 PXDNQ92626 1479 aa18.25■□□□□ 0.51
CLK3-204ENST00000483723 FANCIQ9NVI1 1328 aa18.25■□□□□ 0.51
CLK3-204ENST00000483723 PLIN1O60240 522 aa18.25■□□□□ 0.51
CLK3-204ENST00000483723 CALD1Q05682 793 aaKnown RBP18.25■□□□□ 0.51
CLK3-204ENST00000483723 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.25■□□□□ 0.51
CLK3-204ENST00000483723 ZNF853P0CG23 659 aa18.23■□□□□ 0.51
CLK3-204ENST00000483723 BRINP3Q76B58 766 aa18.23■□□□□ 0.51
CLK3-204ENST00000483723 MED1Q15648 1581 aaPredicted RBP18.23■□□□□ 0.51
CLK3-204ENST00000483723 BCAR3O75815 825 aa18.23■□□□□ 0.51
CLK3-204ENST00000483723 RARSP54136 660 aaKnown RBP18.23■□□□□ 0.51
CLK3-204ENST00000483723 EXOC6Q8TAG9 804 aa18.23■□□□□ 0.51
CLK3-204ENST00000483723 SLAIN2Q9P270 581 aa18.23■□□□□ 0.51
CLK3-204ENST00000483723 DDX17Q92841 729 aaKnown RBP18.22■□□□□ 0.51
CLK3-204ENST00000483723 SPATA31A3Q5VYP0 1347 aa18.21■□□□□ 0.51
CLK3-204ENST00000483723 TNS3Q68CZ2 1445 aa18.21■□□□□ 0.51
CLK3-204ENST00000483723 TSR2Q969E8 191 aaKnown RBP18.21■□□□□ 0.51
CLK3-204ENST00000483723 IFT57Q9NWB7 429 aa18.21■□□□□ 0.51
CLK3-204ENST00000483723 EXOSC9Q06265 439 aaKnown RBP18.2■□□□□ 0.5
CLK3-204ENST00000483723 GNAI1P63096 354 aa18.2■□□□□ 0.5
CLK3-204ENST00000483723 B4GALNT3Q6L9W6 998 aa18.2■□□□□ 0.5
CLK3-204ENST00000483723 LMOD2Q6P5Q4 547 aa18.2■□□□□ 0.5
CLK3-204ENST00000483723 PELP1Q8IZL8 1130 aaKnown RBP18.2■□□□□ 0.5
CLK3-204ENST00000483723 C20orf194Q5TEA3 1177 aa18.19■□□□□ 0.5
CLK3-204ENST00000483723 CRYBG1Q9Y4K1 1723 aa18.19■□□□□ 0.5
CLK3-204ENST00000483723 NCAPD2Q15021 1401 aa18.19■□□□□ 0.5
CLK3-204ENST00000483723 SOS2Q07890 1332 aaPredicted RBP18.19■□□□□ 0.5
CLK3-204ENST00000483723 MTHFSDQ2M296 383 aaKnown RBP18.18■□□□□ 0.5
CLK3-204ENST00000483723 CFAP44Q96MT7 982 aa18.18■□□□□ 0.5
CLK3-204ENST00000483723 CRBNQ96SW2 442 aa18.18■□□□□ 0.5
CLK3-204ENST00000483723 THUMPD2Q9BTF0 503 aaKnown RBP18.18■□□□□ 0.5
CLK3-204ENST00000483723 LTBP4Q8N2S1 1624 aa18.17■□□□□ 0.5
CLK3-204ENST00000483723 FAM83GA6ND36 823 aa18.17■□□□□ 0.5
CLK3-204ENST00000483723 PDE3AQ14432 1141 aa18.17■□□□□ 0.5
CLK3-204ENST00000483723 GAS2L2Q8NHY3 880 aa18.17■□□□□ 0.5
CLK3-204ENST00000483723 LTV1Q96GA3 475 aaPredicted RBP18.17■□□□□ 0.5
CLK3-204ENST00000483723 HTATSF1O43719 755 aaKnown RBP18.16■□□□□ 0.5
CLK3-204ENST00000483723 NBPF6Q5VWK0 638 aa18.16■□□□□ 0.5
CLK3-204ENST00000483723 NBPF4Q96M43 638 aa18.16■□□□□ 0.5
CLK3-204ENST00000483723 RGPD2P0DJD1 1756 aa18.16■□□□□ 0.5
CLK3-204ENST00000483723 COL18A1P39060 1754 aa18.16■□□□□ 0.5
CLK3-204ENST00000483723 ZNF428Q96B54 188 aa18.15■□□□□ 0.5
CLK3-204ENST00000483723 CAMTA1Q9Y6Y1 1673 aa18.15■□□□□ 0.5
CLK3-204ENST00000483723 DCTN1Q14203 1278 aa18.15■□□□□ 0.5
CLK3-204ENST00000483723 CCDC136Q96JN2 1154 aa18.15■□□□□ 0.5
CLK3-204ENST00000483723 MBIPQ9NS73 344 aa18.14■□□□□ 0.49
CLK3-204ENST00000483723 AXIN2Q9Y2T1 843 aa18.14■□□□□ 0.49
CLK3-204ENST00000483723 ABCC6O95255 1503 aa18.14■□□□□ 0.49
CLK3-204ENST00000483723 RGPD5Q99666 1765 aa18.14■□□□□ 0.49
CLK3-204ENST00000483723 CRB1P82279 1406 aa18.13■□□□□ 0.49
CLK3-204ENST00000483723 CHL1O00533 1208 aa18.13■□□□□ 0.49
CLK3-204ENST00000483723 NHSL1Q5SYE7 1610 aa18.13■□□□□ 0.49
CLK3-204ENST00000483723 CPDO75976 1380 aa18.12■□□□□ 0.49
CLK3-204ENST00000483723 VAMP4O75379 141 aa18.12■□□□□ 0.49
CLK3-204ENST00000483723 BRPF1P55201 1214 aaPredicted RBP18.12■□□□□ 0.49
CLK3-204ENST00000483723 ALDH1L2Q3SY69 923 aa18.12■□□□□ 0.49
CLK3-204ENST00000483723 ANKRD24Q8TF21 1146 aa18.12■□□□□ 0.49
CLK3-204ENST00000483723 LAS1LQ9Y4W2 734 aaKnown RBP18.12■□□□□ 0.49
CLK3-204ENST00000483723 LMO7Q8WWI1 1683 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms