RNA–Protein interactions for RNA: ENST00000483039.5

TNFSF13-208, Transcript of TNF superfamily member 13, humanhuman

TSL 2 BASIC

Gene TNFSF13, Length 959 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-208ENST00000483039 CDCA7Q9BWT1 371 aaPredicted RBP26.29■■□□□ 1.8
TNFSF13-208ENST00000483039 ATF5Q9Y2D1 282 aaPredicted RBP26.29■■□□□ 1.8
TNFSF13-208ENST00000483039 CHD4Q14839 1912 aa26.29■■□□□ 1.8
TNFSF13-208ENST00000483039 WNK3Q9BYP7 1800 aa26.28■■□□□ 1.8
TNFSF13-208ENST00000483039 SYT17Q9BSW7 474 aa26.28■■□□□ 1.8
TNFSF13-208ENST00000483039 STK32BQ9NY57 414 aa26.28■■□□□ 1.8
TNFSF13-208ENST00000483039 SLIT3O75094 1523 aa26.28■■□□□ 1.8
TNFSF13-208ENST00000483039 AKAP12Q02952 1782 aa26.28■■□□□ 1.8
TNFSF13-208ENST00000483039 NLRP6P59044 892 aa26.27■■□□□ 1.8
TNFSF13-208ENST00000483039 SRPK2P78362 688 aaKnown RBP26.27■■□□□ 1.8
TNFSF13-208ENST00000483039 COL18A1P39060 1754 aa26.26■■□□□ 1.79
TNFSF13-208ENST00000483039 KIAA1210Q9ULL0 1709 aa26.26■■□□□ 1.79
TNFSF13-208ENST00000483039 TXNRD1Q16881 649 aa26.26■■□□□ 1.79
TNFSF13-208ENST00000483039 FHDC1Q9C0D6 1143 aaPredicted RBP26.26■■□□□ 1.79
TNFSF13-208ENST00000483039 WDR17Q8IZU2 1322 aa26.25■■□□□ 1.79
TNFSF13-208ENST00000483039 SLC15A2Q16348 729 aa26.25■■□□□ 1.79
TNFSF13-208ENST00000483039 MTFR1LQ9H019 292 aa26.24■■□□□ 1.79
TNFSF13-208ENST00000483039 USP6P35125 1406 aa26.23■■□□□ 1.79
TNFSF13-208ENST00000483039 UTRNP46939 3433 aa26.23■■□□□ 1.79
TNFSF13-208ENST00000483039 SENP3-EIF4A1A0A087X0R7 540 aa26.23■■□□□ 1.79
TNFSF13-208ENST00000483039 CABP2Q9NPB3 220 aa26.22■■□□□ 1.79
TNFSF13-208ENST00000483039 AXIN2Q9Y2T1 843 aa26.22■■□□□ 1.79
TNFSF13-208ENST00000483039 C1QTNF8P60827 252 aa26.21■■□□□ 1.79
TNFSF13-208ENST00000483039 SGIP1Q9BQI5 828 aa26.21■■□□□ 1.79
TNFSF13-208ENST00000483039 CENPJQ9HC77 1338 aaPredicted RBP26.18■■□□□ 1.78
TNFSF13-208ENST00000483039 CARD10Q9BWT7 1032 aa26.18■■□□□ 1.78
TNFSF13-208ENST00000483039 CABP1Q9NZU7 370 aa26.18■■□□□ 1.78
TNFSF13-208ENST00000483039 CPSF1Q10570 1443 aaKnown RBP26.17■■□□□ 1.78
TNFSF13-208ENST00000483039 EXOC5O00471 708 aa26.17■■□□□ 1.78
TNFSF13-208ENST00000483039 NBPF1Q3BBV0 1214 aa26.17■■□□□ 1.78
TNFSF13-208ENST00000483039 PIK3C2AO00443 1686 aa26.16■■□□□ 1.78
TNFSF13-208ENST00000483039 ARHGEF25Q86VW2 580 aa26.15■■□□□ 1.78
TNFSF13-208ENST00000483039 RGPD5Q99666 1765 aa26.15■■□□□ 1.78
TNFSF13-208ENST00000483039 CSB-PGBD3P0DP91 1061 aa26.14■■□□□ 1.78
TNFSF13-208ENST00000483039 ARXQ96QS3 562 aa26.14■■□□□ 1.78
TNFSF13-208ENST00000483039 MAP3K5Q99683 1374 aa26.14■■□□□ 1.78
TNFSF13-208ENST00000483039 KCNH5Q8NCM2 988 aa26.13■■□□□ 1.77
TNFSF13-208ENST00000483039 QRICH2Q9H0J4 1663 aa26.12■■□□□ 1.77
TNFSF13-208ENST00000483039 CCDC7Q96M83 1385 aa26.11■■□□□ 1.77
TNFSF13-208ENST00000483039 NHSQ6T4R5 1651 aa26.1■■□□□ 1.77
TNFSF13-208ENST00000483039 TNS2Q63HR2 1409 aa26.1■■□□□ 1.77
TNFSF13-208ENST00000483039 TRPM1Q7Z4N2 1603 aa26.08■■□□□ 1.77
TNFSF13-208ENST00000483039 PAPPAQ13219 1627 aa26.07■■□□□ 1.76
TNFSF13-208ENST00000483039 ZNF692Q9BU19 519 aaPredicted RBP26.06■■□□□ 1.76
TNFSF13-208ENST00000483039 TTC21BQ7Z4L5 1316 aa26.06■■□□□ 1.76
TNFSF13-208ENST00000483039 GPR162Q16538 588 aa26.05■■□□□ 1.76
TNFSF13-208ENST00000483039 SOX12O15370 315 aa26.04■■□□□ 1.76
TNFSF13-208ENST00000483039 IFFO2Q5TF58 517 aa26.04■■□□□ 1.76
TNFSF13-208ENST00000483039 ACSBG1Q96GR2 724 aa26.04■■□□□ 1.76
TNFSF13-208ENST00000483039 ABCC6O95255 1503 aa26.04■■□□□ 1.76
TNFSF13-208ENST00000483039 TTC21AQ8NDW8 1320 aa26.03■■□□□ 1.76
TNFSF13-208ENST00000483039 EVC2Q86UK5 1308 aa26.02■■□□□ 1.76
TNFSF13-208ENST00000483039 NFAT5O94916 1531 aa26.02■■□□□ 1.76
TNFSF13-208ENST00000483039 GIGYF1O75420 1035 aaPredicted RBP26.01■■□□□ 1.75
TNFSF13-208ENST00000483039 BTAF1O14981 1849 aa26■■□□□ 1.75
TNFSF13-208ENST00000483039 KAT6BQ8WYB5 2073 aa26■■□□□ 1.75
TNFSF13-208ENST00000483039 ZNF827Q17R98 1081 aa25.99■■□□□ 1.75
TNFSF13-208ENST00000483039 SLC16A10Q8TF71 515 aa25.99■■□□□ 1.75
TNFSF13-208ENST00000483039 LRRC4BQ9NT99 713 aa25.97■■□□□ 1.75
TNFSF13-208ENST00000483039 QSER1Q2KHR3 1735 aa25.95■■□□□ 1.74
TNFSF13-208ENST00000483039 IL2RBP14784 551 aa25.95■■□□□ 1.74
TNFSF13-208ENST00000483039 POLD1P28340 1107 aa25.95■■□□□ 1.74
TNFSF13-208ENST00000483039 COL24A1Q17RW2 1714 aa25.94■■□□□ 1.74
TNFSF13-208ENST00000483039 ERBB3P21860 1342 aa25.94■■□□□ 1.74
TNFSF13-208ENST00000483039 AKT1S1Q96B36 256 aa25.94■■□□□ 1.74
TNFSF13-208ENST00000483039 NLRP2Q9NX02 1062 aa25.94■■□□□ 1.74
TNFSF13-208ENST00000483039 KLHL34Q8N239 644 aa25.93■■□□□ 1.74
TNFSF13-208ENST00000483039 SLC27A3Q5K4L6 730 aa25.91■■□□□ 1.74
TNFSF13-208ENST00000483039 PELP1Q8IZL8 1130 aaKnown RBP25.91■■□□□ 1.74
TNFSF13-208ENST00000483039 KTN1Q86UP2 1357 aaKnown RBP25.91■■□□□ 1.74
TNFSF13-208ENST00000483039 SHANK3Q9BYB0 1731 aa25.9■■□□□ 1.74
TNFSF13-208ENST00000483039 PNPLA7Q6ZV29 1317 aa25.88■■□□□ 1.73
TNFSF13-208ENST00000483039 USP31Q70CQ4 1352 aa25.88■■□□□ 1.73
TNFSF13-208ENST00000483039 USP54Q70EL1 1684 aa25.87■■□□□ 1.73
TNFSF13-208ENST00000483039 MON2Q7Z3U7 1717 aa25.86■■□□□ 1.73
TNFSF13-208ENST00000483039 LTN1O94822 1766 aa25.86■■□□□ 1.73
TNFSF13-208ENST00000483039 NLGN2Q8NFZ4 835 aa25.85■■□□□ 1.73
TNFSF13-208ENST00000483039 ANKRD24Q8TF21 1146 aa25.85■■□□□ 1.73
TNFSF13-208ENST00000483039 GRIN3BO60391 1043 aa25.84■■□□□ 1.73
TNFSF13-208ENST00000483039 TFCP2L1Q9NZI6 479 aa25.84■■□□□ 1.73
TNFSF13-208ENST00000483039 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.83■■□□□ 1.73
TNFSF13-208ENST00000483039 TUBGCP6Q96RT7 1819 aa25.83■■□□□ 1.73
TNFSF13-208ENST00000483039 GOLGB1Q14789 3259 aaKnown RBP25.82■■□□□ 1.72
TNFSF13-208ENST00000483039 YBX3P16989 372 aaKnown RBP eCLIP25.79■■□□□ 1.72
TNFSF13-208ENST00000483039 NME9Q86XW9 330 aa25.79■■□□□ 1.72
TNFSF13-208ENST00000483039 DDX54Q8TDD1 881 aaKnown RBP25.79■■□□□ 1.72
TNFSF13-208ENST00000483039 CEP350Q5VT06 3117 aa25.79■■□□□ 1.72
TNFSF13-208ENST00000483039 L3MBTL2Q969R5 705 aa25.78■■□□□ 1.72
TNFSF13-208ENST00000483039 LY75O60449 1722 aa25.77■■□□□ 1.72
TNFSF13-208ENST00000483039 KCNQ4P56696 695 aa25.76■■□□□ 1.71
TNFSF13-208ENST00000483039 ROCK2O75116 1388 aaKnown RBP25.76■■□□□ 1.71
TNFSF13-208ENST00000483039 SBNO2Q9Y2G9 1366 aa25.76■■□□□ 1.71
TNFSF13-208ENST00000483039 ANKRD36BQ8N2N9 1353 aa25.75■■□□□ 1.71
TNFSF13-208ENST00000483039 SYTL4Q96C24 671 aaPredicted RBP25.75■■□□□ 1.71
TNFSF13-208ENST00000483039 PRIM1P49642 420 aaKnown RBP25.74■■□□□ 1.71
TNFSF13-208ENST00000483039 FAM208AQ9UK61 1670 aaKnown RBP25.74■■□□□ 1.71
TNFSF13-208ENST00000483039 CD163L1Q9NR16 1453 aa25.73■■□□□ 1.71
TNFSF13-208ENST00000483039 ATP10DQ9P241 1426 aa25.73■■□□□ 1.71
TNFSF13-208ENST00000483039 DOT1LQ8TEK3 1739 aa25.71■■□□□ 1.71
TNFSF13-208ENST00000483039 IP6K1Q92551 441 aa25.71■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms