RNA–Protein interactions for RNA: ENST00000480171.7

PKP4-210, Transcript of plakophilin 4, human

TSL 2

Gene PKP4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKP4-210	ENST00000480171	TMEM131L	A2VDJ0	1609 aa		10.88	□□□□□ -0.67
PKP4-210	ENST00000480171	CDC42BPG	Q6DT37	1551 aa		10.88	□□□□□ -0.67
PKP4-210	ENST00000480171	PRKAR2B	P31323	418 aa		10.88	□□□□□ -0.67
PKP4-210	ENST00000480171	ARHGAP45	Q92619	1136 aa		10.88	□□□□□ -0.67
PKP4-210	ENST00000480171	SNX21	Q969T3	373 aa		10.88	□□□□□ -0.67
PKP4-210	ENST00000480171	LNPK	Q9C0E8	428 aa		10.88	□□□□□ -0.67
PKP4-210	ENST00000480171	CABP1	Q9NZU7	370 aa		10.88	□□□□□ -0.67
PKP4-210	ENST00000480171	SENP3	Q9H4L4	574 aa	Predicted RBP	10.87	□□□□□ -0.67
PKP4-210	ENST00000480171	PREX1	Q8TCU6	1659 aa		10.87	□□□□□ -0.67
PKP4-210	ENST00000480171	TRAK2	O60296	914 aa		10.87	□□□□□ -0.67
PKP4-210	ENST00000480171	NFE2L2	Q16236	605 aa		10.87	□□□□□ -0.67
PKP4-210	ENST00000480171	BMP2KL	Q5H9B9	411 aa		10.87	□□□□□ -0.67
PKP4-210	ENST00000480171	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	10.87	□□□□□ -0.67
PKP4-210	ENST00000480171	STAG3	Q9UJ98	1225 aa		10.87	□□□□□ -0.67
PKP4-210	ENST00000480171	MYO5B	Q9ULV0	1848 aa		10.87	□□□□□ -0.67
PKP4-210	ENST00000480171	PPIP5K1	Q6PFW1	1433 aa		10.87	□□□□□ -0.67
PKP4-210	ENST00000480171	LRRC7	Q96NW7	1537 aa		10.86	□□□□□ -0.67
PKP4-210	ENST00000480171	GNAI1	P63096	354 aa		10.86	□□□□□ -0.67
PKP4-210	ENST00000480171	RSPH6A	Q9H0K4	717 aa		10.86	□□□□□ -0.67
PKP4-210	ENST00000480171	FAM135B	Q49AJ0	1406 aa		10.86	□□□□□ -0.67
PKP4-210	ENST00000480171	HSP90AB1	P08238	724 aa	Known RBP	10.85	□□□□□ -0.67
PKP4-210	ENST00000480171	ANKRD45	Q5TZF3	282 aa		10.85	□□□□□ -0.67
PKP4-210	ENST00000480171	CIZ1	Q9ULV3	898 aa	Predicted RBP	10.85	□□□□□ -0.67
PKP4-210	ENST00000480171	ARHGEF40	Q8TER5	1519 aa		10.85	□□□□□ -0.67
PKP4-210	ENST00000480171	FSD2	A1L4K1	749 aa		10.85	□□□□□ -0.67
PKP4-210	ENST00000480171	PTMS	P20962	102 aa		10.85	□□□□□ -0.67
PKP4-210	ENST00000480171	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	10.85	□□□□□ -0.67
PKP4-210	ENST00000480171	NECTIN2	Q92692	538 aa		10.85	□□□□□ -0.67
PKP4-210	ENST00000480171	POLK	Q9UBT6	870 aa		10.85	□□□□□ -0.67
PKP4-210	ENST00000480171	ALK	Q9UM73	1620 aa		10.85	□□□□□ -0.67
PKP4-210	ENST00000480171	ZBTB7B	O15156	539 aa	Predicted RBP	10.84	□□□□□ -0.67
PKP4-210	ENST00000480171	LMOD3	Q0VAK6	560 aa		10.84	□□□□□ -0.67
PKP4-210	ENST00000480171	MRPL50	Q8N5N7	158 aa	Known RBP	10.84	□□□□□ -0.67
PKP4-210	ENST00000480171	GZF1	Q9H116	711 aa	Predicted RBP	10.84	□□□□□ -0.67
PKP4-210	ENST00000480171	IFT57	Q9NWB7	429 aa		10.84	□□□□□ -0.67
PKP4-210	ENST00000480171	ISY1	Q9ULR0	285 aa	Known RBP	10.84	□□□□□ -0.67
PKP4-210	ENST00000480171	ATP7B	P35670	1465 aa		10.84	□□□□□ -0.67
PKP4-210	ENST00000480171	VAMP4	O75379	141 aa		10.84	□□□□□ -0.67
PKP4-210	ENST00000480171	GBP4	Q96PP9	640 aa		10.84	□□□□□ -0.67
PKP4-210	ENST00000480171	RICTOR	Q6R327	1708 aa		10.84	□□□□□ -0.67
PKP4-210	ENST00000480171	NCOA3	Q9Y6Q9	1424 aa		10.84	□□□□□ -0.67
PKP4-210	ENST00000480171	PIK3R4	Q99570	1358 aa		10.83	□□□□□ -0.68
PKP4-210	ENST00000480171	PTCH1	Q13635	1447 aa		10.83	□□□□□ -0.68
PKP4-210	ENST00000480171	XRCC6	P12956	609 aa	Known RBP eCLIP	10.83	□□□□□ -0.68
PKP4-210	ENST00000480171	MRE11	P49959	708 aa		10.83	□□□□□ -0.68
PKP4-210	ENST00000480171	API5	Q9BZZ5	524 aa	Known RBP	10.83	□□□□□ -0.68
PKP4-210	ENST00000480171	HSP90AA1	P07900	732 aa	Known RBP	10.82	□□□□□ -0.68
PKP4-210	ENST00000480171	DLC1	Q96QB1	1528 aa		10.82	□□□□□ -0.68
PKP4-210	ENST00000480171	HMOX1	P09601	288 aa		10.82	□□□□□ -0.68
PKP4-210	ENST00000480171	ZNF692	Q9BU19	519 aa	Predicted RBP	10.82	□□□□□ -0.68
PKP4-210	ENST00000480171	YEATS2	Q9ULM3	1422 aa		10.82	□□□□□ -0.68
PKP4-210	ENST00000480171	RERE	Q9P2R6	1566 aa		10.81	□□□□□ -0.68
PKP4-210	ENST00000480171	DDIT3	P35638	169 aa		10.81	□□□□□ -0.68
PKP4-210	ENST00000480171	SKOR2	Q2VWA4	1001 aa	Predicted RBP	10.81	□□□□□ -0.68
PKP4-210	ENST00000480171	PHACTR3	Q96KR7	559 aa		10.81	□□□□□ -0.68
PKP4-210	ENST00000480171	TWISTNB	Q3B726	338 aa	Predicted RBP	10.81	□□□□□ -0.68
PKP4-210	ENST00000480171	ABCC4	O15439	1325 aa		10.81	□□□□□ -0.68
PKP4-210	ENST00000480171	ZNF853	P0CG23	659 aa		10.8	□□□□□ -0.68
PKP4-210	ENST00000480171	FBXO31	Q5XUX0	539 aa	Predicted RBP	10.8	□□□□□ -0.68
PKP4-210	ENST00000480171	EDC4	Q6P2E9	1401 aa	Known RBP	10.8	□□□□□ -0.68
PKP4-210	ENST00000480171	MAP2	P11137	1827 aa	Known RBP	10.8	□□□□□ -0.68
PKP4-210	ENST00000480171	CDC45	O75419	566 aa		10.8	□□□□□ -0.68
PKP4-210	ENST00000480171	IL13	P35225	146 aa		10.8	□□□□□ -0.68
PKP4-210	ENST00000480171	THUMPD2	Q9BTF0	503 aa	Known RBP	10.8	□□□□□ -0.68
PKP4-210	ENST00000480171	C1orf115	Q9H7X2	142 aa		10.8	□□□□□ -0.68
PKP4-210	ENST00000480171	MBIP	Q9NS73	344 aa		10.8	□□□□□ -0.68
PKP4-210	ENST00000480171	CCDC9	Q9Y3X0	531 aa	Known RBP	10.8	□□□□□ -0.68
PKP4-210	ENST00000480171	KIF24	Q5T7B8	1368 aa		10.8	□□□□□ -0.68
PKP4-210	ENST00000480171	CDK12	Q9NYV4	1490 aa	Predicted RBP	10.79	□□□□□ -0.68
PKP4-210	ENST00000480171	TBC1D9	Q6ZT07	1266 aa		10.79	□□□□□ -0.68
PKP4-210	ENST00000480171	TNPO1	Q92973	898 aa	Known RBP	10.79	□□□□□ -0.68
PKP4-210	ENST00000480171		K7ELQ4	463 aa	Predicted RBP	10.79	□□□□□ -0.68
PKP4-210	ENST00000480171	ELL2	O00472	640 aa	Predicted RBP	10.79	□□□□□ -0.68
PKP4-210	ENST00000480171	RAB3GAP1	Q15042	981 aa		10.79	□□□□□ -0.68
PKP4-210	ENST00000480171	WAPL	Q7Z5K2	1190 aa		10.79	□□□□□ -0.68
PKP4-210	ENST00000480171	TSPYL6	Q8N831	410 aa		10.79	□□□□□ -0.68
PKP4-210	ENST00000480171	RRAGD	Q9NQL2	400 aa	Predicted RBP	10.79	□□□□□ -0.68
PKP4-210	ENST00000480171	AATK	Q6ZMQ8	1374 aa		10.79	□□□□□ -0.68
PKP4-210	ENST00000480171	COG3	Q96JB2	828 aa		10.78	□□□□□ -0.68
PKP4-210	ENST00000480171	EMILIN1	Q9Y6C2	1016 aa		10.78	□□□□□ -0.68
PKP4-210	ENST00000480171	GOLGA6L22	H0YM25	854 aa		10.78	□□□□□ -0.68
PKP4-210	ENST00000480171	FBLN1	P23142	703 aa		10.78	□□□□□ -0.68
PKP4-210	ENST00000480171	GRPEL1	Q9HAV7	217 aa		10.78	□□□□□ -0.68
PKP4-210	ENST00000480171	WASL	O00401	505 aa	Predicted RBP	10.77	□□□□□ -0.69
PKP4-210	ENST00000480171	CPSF1	Q10570	1443 aa	Known RBP	10.77	□□□□□ -0.69
PKP4-210	ENST00000480171	SIRT2	Q8IXJ6	389 aa		10.77	□□□□□ -0.69
PKP4-210	ENST00000480171	KIF2C	Q99661	725 aa		10.77	□□□□□ -0.69
PKP4-210	ENST00000480171	PANK2	Q9BZ23	570 aa		10.77	□□□□□ -0.69
PKP4-210	ENST00000480171	RIMS2	Q9UQ26	1411 aa		10.76	□□□□□ -0.69
PKP4-210	ENST00000480171	NME9	Q86XW9	330 aa		10.76	□□□□□ -0.69
PKP4-210	ENST00000480171	C8orf58	Q8NAV2	365 aa		10.76	□□□□□ -0.69
PKP4-210	ENST00000480171	RABEP1	Q15276	862 aa		10.75	□□□□□ -0.69
PKP4-210	ENST00000480171	DCTPP1	Q9H773	170 aa		10.75	□□□□□ -0.69
PKP4-210	ENST00000480171	A2ML1	A8K2U0	1454 aa		10.75	□□□□□ -0.69
PKP4-210	ENST00000480171	CLCN1	P35523	988 aa		10.75	□□□□□ -0.69
PKP4-210	ENST00000480171	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	10.75	□□□□□ -0.69
PKP4-210	ENST00000480171	NAP1L5	Q96NT1	182 aa	Predicted RBP	10.75	□□□□□ -0.69
PKP4-210	ENST00000480171	CASC1	Q6TDU7	716 aa		10.74	□□□□□ -0.69
PKP4-210	ENST00000480171	NUDT16	Q96DE0	195 aa	Known RBP	10.74	□□□□□ -0.69
PKP4-210	ENST00000480171	ZFP91	Q96JP5	570 aa	Predicted RBP	10.74	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms