RNA–Protein interactions for RNA: ENST00000479239.1

LRRC47-203, Transcript of leucine rich repeat containing 47, humanhuman

TSL 3

Gene LRRC47, Length 434 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC47-203ENST00000479239 FYB1O15117 783 aa8.19□□□□□ -1.1
LRRC47-203ENST00000479239 PYGBP11216 843 aa8.19□□□□□ -1.1
LRRC47-203ENST00000479239 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.19□□□□□ -1.1
LRRC47-203ENST00000479239 GGNBP2Q9H3C7 697 aa8.19□□□□□ -1.1
LRRC47-203ENST00000479239 QTRT2Q9H974 415 aaKnown RBP8.19□□□□□ -1.1
LRRC47-203ENST00000479239 CD163L1Q9NR16 1453 aa8.19□□□□□ -1.1
LRRC47-203ENST00000479239 NHSL1Q5SYE7 1610 aa8.18□□□□□ -1.1
LRRC47-203ENST00000479239 CHD2O14647 1828 aaKnown RBP8.18□□□□□ -1.1
LRRC47-203ENST00000479239 WDR43Q15061 677 aaKnown RBP eCLIP8.18□□□□□ -1.1
LRRC47-203ENST00000479239 C14orf37Q86TY3 774 aa8.18□□□□□ -1.1
LRRC47-203ENST00000479239 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.17□□□□□ -1.1
LRRC47-203ENST00000479239 CFAP53Q96M91 514 aa8.17□□□□□ -1.1
LRRC47-203ENST00000479239 ACEP12821 1306 aa8.17□□□□□ -1.1
LRRC47-203ENST00000479239 CPSF1Q10570 1443 aaKnown RBP8.17□□□□□ -1.1
LRRC47-203ENST00000479239 ADGRB2O60241 1585 aa8.17□□□□□ -1.1
LRRC47-203ENST00000479239 XRN1Q8IZH2 1706 aaKnown RBP8.17□□□□□ -1.1
LRRC47-203ENST00000479239 MTHFSP49914 203 aa8.16□□□□□ -1.1
LRRC47-203ENST00000479239 IFFO2Q5TF58 517 aa8.16□□□□□ -1.1
LRRC47-203ENST00000479239 EDC4Q6P2E9 1401 aaKnown RBP8.16□□□□□ -1.1
LRRC47-203ENST00000479239 ZBED9Q6R2W3 1325 aa8.16□□□□□ -1.1
LRRC47-203ENST00000479239 NGDNQ8NEJ9 315 aaKnown RBP8.16□□□□□ -1.1
LRRC47-203ENST00000479239 USP32Q8NFA0 1604 aa8.16□□□□□ -1.1
LRRC47-203ENST00000479239 EP400Q96L91 3159 aa8.16□□□□□ -1.1
LRRC47-203ENST00000479239 C8orf37Q96NL8 207 aa8.16□□□□□ -1.1
LRRC47-203ENST00000479239 RYDENQ9NUL5 291 aaKnown RBP8.16□□□□□ -1.1
LRRC47-203ENST00000479239 ADAMTS8Q9UP79 889 aa8.16□□□□□ -1.1
LRRC47-203ENST00000479239 ANKARQ7Z5J8 1434 aa8.15□□□□□ -1.1
LRRC47-203ENST00000479239 NCOA3Q9Y6Q9 1424 aa8.15□□□□□ -1.1
LRRC47-203ENST00000479239 POLR3AO14802 1390 aaPredicted RBP8.15□□□□□ -1.1
LRRC47-203ENST00000479239 INSRP06213 1382 aa8.15□□□□□ -1.1
LRRC47-203ENST00000479239 NME9Q86XW9 330 aa8.15□□□□□ -1.1
LRRC47-203ENST00000479239 CCDC125Q86Z20 511 aa8.15□□□□□ -1.1
LRRC47-203ENST00000479239 PMFBP1Q8TBY8 1022 aa8.15□□□□□ -1.1
LRRC47-203ENST00000479239 TTC21BQ7Z4L5 1316 aa8.14□□□□□ -1.11
LRRC47-203ENST00000479239 SENP3-EIF4A1A0A087X0R7 540 aa8.14□□□□□ -1.11
LRRC47-203ENST00000479239 NGLY1Q96IV0 654 aa8.14□□□□□ -1.11
LRRC47-203ENST00000479239 COG3Q96JB2 828 aa8.14□□□□□ -1.11
LRRC47-203ENST00000479239 CDC42BPGQ6DT37 1551 aa8.14□□□□□ -1.11
LRRC47-203ENST00000479239 BCL9LQ86UU0 1499 aa8.13□□□□□ -1.11
LRRC47-203ENST00000479239 ADGRL3Q9HAR2 1447 aa8.13□□□□□ -1.11
LRRC47-203ENST00000479239 PNPLA6Q8IY17 1366 aa8.13□□□□□ -1.11
LRRC47-203ENST00000479239 PITPNM1O00562 1244 aa8.13□□□□□ -1.11
LRRC47-203ENST00000479239 BRINP3Q76B58 766 aa8.13□□□□□ -1.11
LRRC47-203ENST00000479239 PHF8Q9UPP1 1060 aa8.13□□□□□ -1.11
LRRC47-203ENST00000479239 GTF3C3Q9Y5Q9 886 aa8.13□□□□□ -1.11
LRRC47-203ENST00000479239 ATRNO75882 1429 aa8.12□□□□□ -1.11
LRRC47-203ENST00000479239 C19orf44Q9H6X5 657 aa8.12□□□□□ -1.11
LRRC47-203ENST00000479239 SALL2Q9Y467 1007 aaPredicted RBP8.12□□□□□ -1.11
LRRC47-203ENST00000479239 USP6P35125 1406 aa8.12□□□□□ -1.11
LRRC47-203ENST00000479239 BLMP54132 1417 aaPredicted RBP8.12□□□□□ -1.11
LRRC47-203ENST00000479239 TTC21AQ8NDW8 1320 aa8.11□□□□□ -1.11
LRRC47-203ENST00000479239 PPM1GO15355 546 aaPredicted RBP8.11□□□□□ -1.11
LRRC47-203ENST00000479239 ATF3P18847 181 aa8.11□□□□□ -1.11
LRRC47-203ENST00000479239 ESCO1Q5FWF5 840 aa8.11□□□□□ -1.11
LRRC47-203ENST00000479239 CADPS2Q86UW7 1296 aa8.11□□□□□ -1.11
LRRC47-203ENST00000479239 NUDCQ9Y266 331 aa8.11□□□□□ -1.11
LRRC47-203ENST00000479239 DIAPH1O60610 1272 aaKnown RBP8.1□□□□□ -1.11
LRRC47-203ENST00000479239 U2AF1L5P0DN76 240 aaPredicted RBP8.1□□□□□ -1.11
LRRC47-203ENST00000479239 FBLN1P23142 703 aa8.1□□□□□ -1.11
LRRC47-203ENST00000479239 YY1P25490 414 aa8.1□□□□□ -1.11
LRRC47-203ENST00000479239 U2AF1Q01081 240 aaKnown RBP eCLIP8.1□□□□□ -1.11
LRRC47-203ENST00000479239 PSME1Q06323 249 aa8.1□□□□□ -1.11
LRRC47-203ENST00000479239 DEFB132Q7Z7B7 95 aa8.1□□□□□ -1.11
LRRC47-203ENST00000479239 CCDC146Q8IYE0 955 aa8.1□□□□□ -1.11
LRRC47-203ENST00000479239 POLKQ9UBT6 870 aa8.1□□□□□ -1.11
LRRC47-203ENST00000479239 SSH2Q76I76 1423 aa8.1□□□□□ -1.11
LRRC47-203ENST00000479239 TOPAZ1Q8N9V7 1692 aa8.09□□□□□ -1.11
LRRC47-203ENST00000479239 U2SURPO15042 1029 aaKnown RBP8.09□□□□□ -1.11
LRRC47-203ENST00000479239 PAK3O75914 559 aaPredicted RBP8.09□□□□□ -1.11
LRRC47-203ENST00000479239 PDE3BQ13370 1112 aa8.09□□□□□ -1.11
LRRC47-203ENST00000479239 TRPC5Q9UL62 973 aaPredicted RBP8.09□□□□□ -1.11
LRRC47-203ENST00000479239 AATKQ6ZMQ8 1374 aa8.09□□□□□ -1.12
LRRC47-203ENST00000479239 APAF1O14727 1248 aa8.08□□□□□ -1.12
LRRC47-203ENST00000479239 NLRP6P59044 892 aa8.08□□□□□ -1.12
LRRC47-203ENST00000479239 NGEFQ8N5V2 710 aa8.08□□□□□ -1.12
LRRC47-203ENST00000479239 LRRC59Q96AG4 307 aaKnown RBP8.08□□□□□ -1.12
LRRC47-203ENST00000479239 RUNDC1Q96C34 613 aa8.08□□□□□ -1.12
LRRC47-203ENST00000479239 ORAI2Q96SN7 254 aa8.08□□□□□ -1.12
LRRC47-203ENST00000479239 TSPYL2Q9H2G4 693 aaPredicted RBP8.08□□□□□ -1.12
LRRC47-203ENST00000479239 USP21Q9UK80 565 aa8.08□□□□□ -1.12
LRRC47-203ENST00000479239 EMILIN1Q9Y6C2 1016 aa8.08□□□□□ -1.12
LRRC47-203ENST00000479239 DCCP43146 1447 aa8.08□□□□□ -1.12
LRRC47-203ENST00000479239 MST1RQ04912 1400 aa8.08□□□□□ -1.12
LRRC47-203ENST00000479239 SMG6Q86US8 1419 aaKnown RBP8.08□□□□□ -1.12
LRRC47-203ENST00000479239 FMN2Q9NZ56 1722 aa8.08□□□□□ -1.12
LRRC47-203ENST00000479239 MON2Q7Z3U7 1717 aa8.07□□□□□ -1.12
LRRC47-203ENST00000479239 NALCNQ8IZF0 1738 aa8.07□□□□□ -1.12
LRRC47-203ENST00000479239 SOX12O15370 315 aa8.07□□□□□ -1.12
LRRC47-203ENST00000479239 FOXO3O43524 673 aa8.07□□□□□ -1.12
LRRC47-203ENST00000479239 ADAMTS2O95450 1211 aa8.07□□□□□ -1.12
LRRC47-203ENST00000479239 NEFLP07196 543 aa8.07□□□□□ -1.12
LRRC47-203ENST00000479239 RRS1Q15050 365 aaKnown RBP8.07□□□□□ -1.12
LRRC47-203ENST00000479239 FNBP4Q8N3X1 1017 aaPredicted RBP8.07□□□□□ -1.12
LRRC47-203ENST00000479239 ABTB2Q8N961 1025 aa8.07□□□□□ -1.12
LRRC47-203ENST00000479239 BRWD3Q6RI45 1802 aa8.07□□□□□ -1.12
LRRC47-203ENST00000479239 USP31Q70CQ4 1352 aa8.07□□□□□ -1.12
LRRC47-203ENST00000479239 AKAP12Q02952 1782 aa8.07□□□□□ -1.12
LRRC47-203ENST00000479239 ITSN1Q15811 1721 aa8.06□□□□□ -1.12
LRRC47-203ENST00000479239 KIF20BQ96Q89 1820 aa8.06□□□□□ -1.12
LRRC47-203ENST00000479239 OVOS2A0A0J9YW53 1432 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms