RNA–Protein interactions for RNA: ENST00000478404.1

RNF149-204, Transcript of ring finger protein 149, humanhuman

TSL 2

Gene RNF149, Length 997 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF149-204ENST00000478404 PNMA1Q8ND90 353 aa9.63□□□□□ -0.87
RNF149-204ENST00000478404 KCNH2Q12809 1159 aa9.62□□□□□ -0.87
RNF149-204ENST00000478404 IRF7Q92985 503 aa9.62□□□□□ -0.87
RNF149-204ENST00000478404 FBXO45P0C2W1 286 aa9.61□□□□□ -0.87
RNF149-204ENST00000478404 CTHP32929 405 aa9.61□□□□□ -0.87
RNF149-204ENST00000478404 SOX11P35716 441 aa9.61□□□□□ -0.87
RNF149-204ENST00000478404 NR1H3Q13133 447 aa9.61□□□□□ -0.87
RNF149-204ENST00000478404 ZBBXA8MT70 800 aa9.59□□□□□ -0.87
RNF149-204ENST00000478404 J3QL48 77 aa9.59□□□□□ -0.87
RNF149-204ENST00000478404 UCN2Q96RP3 112 aa9.58□□□□□ -0.88
RNF149-204ENST00000478404 OCSTAMPQ9BR26 566 aa9.58□□□□□ -0.88
RNF149-204ENST00000478404 CFAP70Q5T0N1 1121 aa9.57□□□□□ -0.88
RNF149-204ENST00000478404 PTCRAQ6ISU1 281 aaPredicted RBP9.57□□□□□ -0.88
RNF149-204ENST00000478404 HPS1Q92902 700 aa9.57□□□□□ -0.88
RNF149-204ENST00000478404 GPKOWQ92917 476 aaPredicted RBP eCLIP9.57□□□□□ -0.88
RNF149-204ENST00000478404 ZBTB24O43167 697 aaPredicted RBP9.56□□□□□ -0.88
RNF149-204ENST00000478404 EIF4G2P78344 907 aaKnown RBP eCLIP9.56□□□□□ -0.88
RNF149-204ENST00000478404 PDXDC2PQ6P474 469 aa9.56□□□□□ -0.88
RNF149-204ENST00000478404 ARMC2Q8NEN0 867 aa9.56□□□□□ -0.88
RNF149-204ENST00000478404 PPP1R12CQ9BZL4 782 aa9.56□□□□□ -0.88
RNF149-204ENST00000478404 GPSM3Q9Y4H4 160 aa9.56□□□□□ -0.88
RNF149-204ENST00000478404 SEMA3FQ13275 785 aa9.55□□□□□ -0.88
RNF149-204ENST00000478404 UNC93B1Q9H1C4 597 aa9.55□□□□□ -0.88
RNF149-204ENST00000478404 H3BM21 787 aa9.54□□□□□ -0.88
RNF149-204ENST00000478404 SRPK2P78362 688 aaKnown RBP9.54□□□□□ -0.88
RNF149-204ENST00000478404 KCNMA1Q12791 1236 aa9.54□□□□□ -0.88
RNF149-204ENST00000478404 NBPF14Q5TI25 921 aa9.54□□□□□ -0.88
RNF149-204ENST00000478404 MRGPRX2Q96LB1 330 aa9.54□□□□□ -0.88
RNF149-204ENST00000478404 PALM3A6NDB9 673 aaPredicted RBP9.53□□□□□ -0.88
RNF149-204ENST00000478404 PPP1R15AO75807 674 aaPredicted RBP9.53□□□□□ -0.88
RNF149-204ENST00000478404 CCDC24Q8N4L8 307 aa9.53□□□□□ -0.88
RNF149-204ENST00000478404 GSK3AP49840 483 aa9.52□□□□□ -0.89
RNF149-204ENST00000478404 PTK2Q05397 1052 aa9.52□□□□□ -0.89
RNF149-204ENST00000478404 SH3BP5LQ7L8J4 393 aa9.52□□□□□ -0.89
RNF149-204ENST00000478404 TFIP11Q9UBB9 837 aaKnown RBP9.51□□□□□ -0.89
RNF149-204ENST00000478404 ERBB4Q15303 1308 aa9.51□□□□□ -0.89
RNF149-204ENST00000478404 TRIM32Q13049 653 aa9.5□□□□□ -0.89
RNF149-204ENST00000478404 TBC1D9Q6ZT07 1266 aa9.5□□□□□ -0.89
RNF149-204ENST00000478404 PBXIP1Q96AQ6 731 aa9.5□□□□□ -0.89
RNF149-204ENST00000478404 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.49□□□□□ -0.89
RNF149-204ENST00000478404 RFX1P22670 979 aa9.49□□□□□ -0.89
RNF149-204ENST00000478404 SH3RF1Q7Z6J0 888 aa9.49□□□□□ -0.89
RNF149-204ENST00000478404 KCTD17Q8N5Z5 321 aa9.49□□□□□ -0.89
RNF149-204ENST00000478404 MAFBQ9Y5Q3 323 aaPredicted RBP9.49□□□□□ -0.89
RNF149-204ENST00000478404 PIK3CDO00329 1044 aa9.48□□□□□ -0.89
RNF149-204ENST00000478404 LMOD1P29536 600 aaPredicted RBP9.48□□□□□ -0.89
RNF149-204ENST00000478404 ADAM32Q8TC27 787 aa9.48□□□□□ -0.89
RNF149-204ENST00000478404 ARHGAP9Q9BRR9 750 aa9.48□□□□□ -0.89
RNF149-204ENST00000478404 ATP9BO43861 1147 aa9.47□□□□□ -0.89
RNF149-204ENST00000478404 RETREG2Q8NC44 543 aa9.47□□□□□ -0.89
RNF149-204ENST00000478404 NFATC2IPQ8NCF5 419 aa9.47□□□□□ -0.89
RNF149-204ENST00000478404 BAP1Q92560 729 aa9.47□□□□□ -0.89
RNF149-204ENST00000478404 VEGFBP49765 207 aa9.46□□□□□ -0.9
RNF149-204ENST00000478404 CEP126Q9P2H0 1117 aa9.46□□□□□ -0.9
RNF149-204ENST00000478404 PDIA4P13667 645 aaKnown RBP9.45□□□□□ -0.9
RNF149-204ENST00000478404 MCCD1P59942 119 aaPredicted RBP9.45□□□□□ -0.9
RNF149-204ENST00000478404 C4orf48Q5BLP8 95 aa9.45□□□□□ -0.9
RNF149-204ENST00000478404 PHTF2Q8N3S3 785 aa9.45□□□□□ -0.9
RNF149-204ENST00000478404 ZNF511Q8NB15 262 aa9.45□□□□□ -0.9
RNF149-204ENST00000478404 FAM174AQ8TBP5 190 aa9.45□□□□□ -0.9
RNF149-204ENST00000478404 FOXJ1Q92949 421 aa9.45□□□□□ -0.9
RNF149-204ENST00000478404 PCDHB9Q9Y5E1 797 aa9.45□□□□□ -0.9
RNF149-204ENST00000478404 LINC01559Q495D7 138 aa9.44□□□□□ -0.9
RNF149-204ENST00000478404 TRIM46Q7Z4K8 759 aa9.44□□□□□ -0.9
RNF149-204ENST00000478404 ZNF592Q92610 1267 aa9.44□□□□□ -0.9
RNF149-204ENST00000478404 TRAIPQ9BWF2 469 aa9.44□□□□□ -0.9
RNF149-204ENST00000478404 ZBTB33Q86T24 672 aa9.43□□□□□ -0.9
RNF149-204ENST00000478404 ACIN1Q9UKV3 1341 aaKnown RBP9.42□□□□□ -0.9
RNF149-204ENST00000478404 ERFEQ4G0M1 354 aa9.42□□□□□ -0.9
RNF149-204ENST00000478404 BPHLQ86WA6 291 aaPredicted RBP9.42□□□□□ -0.9
RNF149-204ENST00000478404 C1QTNF2Q9BXJ5 285 aa9.42□□□□□ -0.9
RNF149-204ENST00000478404 CHIC2Q9UKJ5 165 aa9.42□□□□□ -0.9
RNF149-204ENST00000478404 MAGEB6P1A0A0J9YX57 407 aa9.41□□□□□ -0.9
RNF149-204ENST00000478404 SH3BP2P78314 561 aa9.41□□□□□ -0.9
RNF149-204ENST00000478404 KANK4Q5T7N3 995 aaPredicted RBP9.41□□□□□ -0.9
RNF149-204ENST00000478404 RC3H1Q5TC82 1133 aaKnown RBP9.41□□□□□ -0.9
RNF149-204ENST00000478404 PLEKHM2Q8IWE5 1019 aa9.41□□□□□ -0.9
RNF149-204ENST00000478404 CARD14Q9BXL6 1004 aa9.41□□□□□ -0.9
RNF149-204ENST00000478404 USP17L3A6NCW0 530 aa9.4□□□□□ -0.9
RNF149-204ENST00000478404 USP17L4A6NCW7 530 aa9.4□□□□□ -0.9
RNF149-204ENST00000478404 USP17L5A8MUK1 530 aa9.4□□□□□ -0.9
RNF149-204ENST00000478404 VSIG8P0DPA2 414 aa9.4□□□□□ -0.9
RNF149-204ENST00000478404 SKIP12755 728 aa9.4□□□□□ -0.9
RNF149-204ENST00000478404 TRIM26Q12899 539 aaPredicted RBP9.4□□□□□ -0.9
RNF149-204ENST00000478404 USP17L2Q6R6M4 530 aa9.4□□□□□ -0.9
RNF149-204ENST00000478404 USP17L1Q7RTZ2 530 aa9.4□□□□□ -0.9
RNF149-204ENST00000478404 ATG7O95352 703 aa9.39□□□□□ -0.91
RNF149-204ENST00000478404 SLFNL1Q499Z3 407 aa9.39□□□□□ -0.91
RNF149-204ENST00000478404 DZIP3Q86Y13 1208 aaKnown RBP9.39□□□□□ -0.91
RNF149-204ENST00000478404 RNF135Q8IUD6 432 aa9.39□□□□□ -0.91
RNF149-204ENST00000478404 BMP1P13497 986 aa9.38□□□□□ -0.91
RNF149-204ENST00000478404 WNT7BP56706 349 aa9.38□□□□□ -0.91
RNF149-204ENST00000478404 SKOR1P84550 965 aa9.38□□□□□ -0.91
RNF149-204ENST00000478404 AGERQ15109 404 aa9.38□□□□□ -0.91
RNF149-204ENST00000478404 CDCA8Q53HL2 280 aa9.38□□□□□ -0.91
RNF149-204ENST00000478404 TMEM151AQ8N4L1 468 aa9.38□□□□□ -0.91
RNF149-204ENST00000478404 TRMT44Q8IYL2 757 aaKnown RBP9.37□□□□□ -0.91
RNF149-204ENST00000478404 PLPP7Q8NBV4 271 aa9.37□□□□□ -0.91
RNF149-204ENST00000478404 VRTNQ9H8Y1 702 aa9.37□□□□□ -0.91
RNF149-204ENST00000478404 GIGYF1O75420 1035 aaPredicted RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms