RNA–Protein interactions for RNA: ENST00000478169.5

CCM2-210, Transcript of CCM2 scaffold protein, human

TSL 4

Gene CCM2, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCM2-210	ENST00000478169	TOM1L2	Q6ZVM7	507 aa		13.91	□□□□□ -0.18
CCM2-210	ENST00000478169	ZNF692	Q9BU19	519 aa	Predicted RBP	13.91	□□□□□ -0.18
CCM2-210	ENST00000478169	WDR17	Q8IZU2	1322 aa		13.9	□□□□□ -0.18
CCM2-210	ENST00000478169	POTED	Q86YR6	584 aa		13.9	□□□□□ -0.18
CCM2-210	ENST00000478169	KCNH5	Q8NCM2	988 aa		13.9	□□□□□ -0.18
CCM2-210	ENST00000478169	BCL11B	Q9C0K0	894 aa	Predicted RBP	13.9	□□□□□ -0.18
CCM2-210	ENST00000478169	PPP1R1B	Q9UD71	204 aa	Predicted RBP	13.9	□□□□□ -0.18
CCM2-210	ENST00000478169	TRPM1	Q7Z4N2	1603 aa		13.9	□□□□□ -0.19
CCM2-210	ENST00000478169	BCL9	O00512	1426 aa		13.9	□□□□□ -0.19
CCM2-210	ENST00000478169	NINL	Q9Y2I6	1382 aa		13.89	□□□□□ -0.19
CCM2-210	ENST00000478169	AXIN2	Q9Y2T1	843 aa		13.89	□□□□□ -0.19
CCM2-210	ENST00000478169	CPSF1	Q10570	1443 aa	Known RBP	13.89	□□□□□ -0.19
CCM2-210	ENST00000478169	DCAF8L1	A6NGE4	600 aa		13.88	□□□□□ -0.19
CCM2-210	ENST00000478169	ARHGEF25	Q86VW2	580 aa		13.88	□□□□□ -0.19
CCM2-210	ENST00000478169	L3MBTL2	Q969R5	705 aa		13.88	□□□□□ -0.19
CCM2-210	ENST00000478169	TTC21B	Q7Z4L5	1316 aa		13.88	□□□□□ -0.19
CCM2-210	ENST00000478169	CASZ1	Q86V15	1759 aa		13.87	□□□□□ -0.19
CCM2-210	ENST00000478169	YY1	P25490	414 aa		13.87	□□□□□ -0.19
CCM2-210	ENST00000478169	MARCH10	Q8NA82	808 aa	Predicted RBP	13.87	□□□□□ -0.19
CCM2-210	ENST00000478169	CARD10	Q9BWT7	1032 aa		13.87	□□□□□ -0.19
CCM2-210	ENST00000478169	TTC21A	Q8NDW8	1320 aa		13.87	□□□□□ -0.19
CCM2-210	ENST00000478169	KAT6B	Q8WYB5	2073 aa		13.86	□□□□□ -0.19
CCM2-210	ENST00000478169	ABCC6	O95255	1503 aa		13.85	□□□□□ -0.19
CCM2-210	ENST00000478169	EXOC5	O00471	708 aa		13.84	□□□□□ -0.19
CCM2-210	ENST00000478169	CSB-PGBD3	P0DP91	1061 aa		13.84	□□□□□ -0.19
CCM2-210	ENST00000478169	PTF1A	Q7RTS3	328 aa		13.84	□□□□□ -0.19
CCM2-210	ENST00000478169	PROM2	Q8N271	834 aa		13.84	□□□□□ -0.19
CCM2-210	ENST00000478169	ANO8	Q9HCE9	1232 aa	Predicted RBP	13.84	□□□□□ -0.19
CCM2-210	ENST00000478169	CCDC7	Q96M83	1385 aa		13.83	□□□□□ -0.19
CCM2-210	ENST00000478169	NFAT5	O94916	1531 aa		13.83	□□□□□ -0.2
CCM2-210	ENST00000478169	ROCK2	O75116	1388 aa	Known RBP	13.83	□□□□□ -0.2
CCM2-210	ENST00000478169	MON2	Q7Z3U7	1717 aa		13.82	□□□□□ -0.2
CCM2-210	ENST00000478169	KTN1	Q86UP2	1357 aa	Known RBP	13.82	□□□□□ -0.2
CCM2-210	ENST00000478169	SOX12	O15370	315 aa		13.81	□□□□□ -0.2
CCM2-210	ENST00000478169	TXNRD1	Q16881	649 aa		13.81	□□□□□ -0.2
CCM2-210	ENST00000478169	STK32B	Q9NY57	414 aa		13.81	□□□□□ -0.2
CCM2-210	ENST00000478169	USP54	Q70EL1	1684 aa		13.8	□□□□□ -0.2
CCM2-210	ENST00000478169	USP31	Q70CQ4	1352 aa		13.8	□□□□□ -0.2
CCM2-210	ENST00000478169	NHS	Q6T4R5	1651 aa		13.79	□□□□□ -0.2
CCM2-210	ENST00000478169	LTN1	O94822	1766 aa		13.79	□□□□□ -0.2
CCM2-210	ENST00000478169	SLC15A2	Q16348	729 aa		13.79	□□□□□ -0.2
CCM2-210	ENST00000478169	SIN3A	Q96ST3	1273 aa		13.79	□□□□□ -0.2
CCM2-210	ENST00000478169	PDGFD	Q9GZP0	370 aa	Predicted RBP	13.79	□□□□□ -0.2
CCM2-210	ENST00000478169	SBNO2	Q9Y2G9	1366 aa		13.79	□□□□□ -0.2
CCM2-210	ENST00000478169	TNS2	Q63HR2	1409 aa		13.79	□□□□□ -0.2
CCM2-210	ENST00000478169	ZBTB7A	O95365	584 aa		13.78	□□□□□ -0.2
CCM2-210	ENST00000478169	PTGER2	P43116	358 aa		13.78	□□□□□ -0.2
CCM2-210	ENST00000478169	MYOM1	P52179	1685 aa		13.78	□□□□□ -0.2
CCM2-210	ENST00000478169	CHD4	Q14839	1912 aa		13.78	□□□□□ -0.2
CCM2-210	ENST00000478169	ERBB3	P21860	1342 aa		13.77	□□□□□ -0.21
CCM2-210	ENST00000478169	MSH5	O43196	834 aa		13.76	□□□□□ -0.21
CCM2-210	ENST00000478169	IL2RB	P14784	551 aa		13.76	□□□□□ -0.21
CCM2-210	ENST00000478169	NEUROD1	Q13562	356 aa		13.76	□□□□□ -0.21
CCM2-210	ENST00000478169	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	13.76	□□□□□ -0.21
CCM2-210	ENST00000478169	MTFR1L	Q9H019	292 aa		13.76	□□□□□ -0.21
CCM2-210	ENST00000478169	NLRP2	Q9NX02	1062 aa		13.76	□□□□□ -0.21
CCM2-210	ENST00000478169	ATF5	Q9Y2D1	282 aa	Predicted RBP	13.76	□□□□□ -0.21
CCM2-210	ENST00000478169	BTAF1	O14981	1849 aa		13.76	□□□□□ -0.21
CCM2-210	ENST00000478169	CD163L1	Q9NR16	1453 aa		13.74	□□□□□ -0.21
CCM2-210	ENST00000478169	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	13.74	□□□□□ -0.21
CCM2-210	ENST00000478169	PAPPA	Q13219	1627 aa		13.73	□□□□□ -0.21
CCM2-210	ENST00000478169	NME9	Q86XW9	330 aa		13.73	□□□□□ -0.21
CCM2-210	ENST00000478169	ACSBG1	Q96GR2	724 aa		13.73	□□□□□ -0.21
CCM2-210	ENST00000478169	SGIP1	Q9BQI5	828 aa		13.73	□□□□□ -0.21
CCM2-210	ENST00000478169	SYT17	Q9BSW7	474 aa		13.73	□□□□□ -0.21
CCM2-210	ENST00000478169	FHDC1	Q9C0D6	1143 aa	Predicted RBP	13.73	□□□□□ -0.21
CCM2-210	ENST00000478169	TMC1	Q8TDI8	760 aa		13.72	□□□□□ -0.21
CCM2-210	ENST00000478169	ANKRD24	Q8TF21	1146 aa		13.72	□□□□□ -0.21
CCM2-210	ENST00000478169	PUS7	Q96PZ0	661 aa	Known RBP	13.72	□□□□□ -0.21
CCM2-210	ENST00000478169	CARD11	Q9BXL7	1154 aa		13.72	□□□□□ -0.21
CCM2-210	ENST00000478169	EDC4	Q6P2E9	1401 aa	Known RBP	13.72	□□□□□ -0.21
CCM2-210	ENST00000478169	SLC12A5	Q9H2X9	1139 aa		13.71	□□□□□ -0.21
CCM2-210	ENST00000478169	TERF2IP	Q9NYB0	399 aa		13.71	□□□□□ -0.21
CCM2-210	ENST00000478169	FAM208A	Q9UK61	1670 aa	Known RBP	13.71	□□□□□ -0.21
CCM2-210	ENST00000478169	QSER1	Q2KHR3	1735 aa		13.7	□□□□□ -0.22
CCM2-210	ENST00000478169	MAP3K5	Q99683	1374 aa		13.7	□□□□□ -0.22
CCM2-210	ENST00000478169	IP6K1	Q92551	441 aa		13.69	□□□□□ -0.22
CCM2-210	ENST00000478169	ARX	Q96QS3	562 aa		13.69	□□□□□ -0.22
CCM2-210	ENST00000478169	SLC27A3	Q5K4L6	730 aa		13.68	□□□□□ -0.22
CCM2-210	ENST00000478169	ZNF784	Q8NCA9	323 aa	Predicted RBP	13.68	□□□□□ -0.22
CCM2-210	ENST00000478169		A0A1W2PP64	1363 aa		13.68	□□□□□ -0.22
CCM2-210	ENST00000478169	COL24A1	Q17RW2	1714 aa		13.67	□□□□□ -0.22
CCM2-210	ENST00000478169	ZNF827	Q17R98	1081 aa		13.67	□□□□□ -0.22
CCM2-210	ENST00000478169	SLC16A10	Q8TF71	515 aa		13.67	□□□□□ -0.22
CCM2-210	ENST00000478169	LRRC4B	Q9NT99	713 aa		13.67	□□□□□ -0.22
CCM2-210	ENST00000478169	AKT1S1	Q96B36	256 aa		13.66	□□□□□ -0.22
CCM2-210	ENST00000478169	SLC24A1	O60721	1099 aa		13.65	□□□□□ -0.22
CCM2-210	ENST00000478169	DDX54	Q8TDD1	881 aa	Known RBP	13.65	□□□□□ -0.22
CCM2-210	ENST00000478169	UTRN	P46939	3433 aa		13.65	□□□□□ -0.22
CCM2-210	ENST00000478169	LY75	O60449	1722 aa		13.64	□□□□□ -0.23
CCM2-210	ENST00000478169	RGPD2	P0DJD1	1756 aa		13.64	□□□□□ -0.23
CCM2-210	ENST00000478169	TUBGCP6	Q96RT7	1819 aa		13.64	□□□□□ -0.23
CCM2-210	ENST00000478169	POLD1	P28340	1107 aa		13.63	□□□□□ -0.23
CCM2-210	ENST00000478169	LTV1	Q96GA3	475 aa	Predicted RBP	13.63	□□□□□ -0.23
CCM2-210	ENST00000478169	COG3	Q96JB2	828 aa		13.63	□□□□□ -0.23
CCM2-210	ENST00000478169	DOT1L	Q8TEK3	1739 aa		13.62	□□□□□ -0.23
CCM2-210	ENST00000478169	SHANK3	Q9BYB0	1731 aa		13.62	□□□□□ -0.23
CCM2-210	ENST00000478169	ANKRD36B	Q8N2N9	1353 aa		13.62	□□□□□ -0.23
CCM2-210	ENST00000478169	TONSL	Q96HA7	1378 aa		13.62	□□□□□ -0.23
CCM2-210	ENST00000478169	HOXC9	P31274	260 aa		13.62	□□□□□ -0.23

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