RNA–Protein interactions for RNA: ENST00000477763.1

SMNDC1-205, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 2

Gene SMNDC1, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-205ENST00000477763 ALDH1A1P00352 501 aa9.3□□□□□ -0.92
SMNDC1-205ENST00000477763 ADH1CP00326 375 aa9.29□□□□□ -0.92
SMNDC1-205ENST00000477763 SMPD1P17405 629 aa9.29□□□□□ -0.92
SMNDC1-205ENST00000477763 J3QL48 77 aa9.28□□□□□ -0.92
SMNDC1-205ENST00000477763 NR5A1Q13285 461 aa9.28□□□□□ -0.92
SMNDC1-205ENST00000477763 NBPF20Q3BBV1 942 aa9.28□□□□□ -0.92
SMNDC1-205ENST00000477763 DZIP3Q86Y13 1208 aaKnown RBP9.28□□□□□ -0.92
SMNDC1-205ENST00000477763 CLUAP1Q96AJ1 413 aa9.28□□□□□ -0.92
SMNDC1-205ENST00000477763 GRM5P41594 1212 aa9.27□□□□□ -0.93
SMNDC1-205ENST00000477763 EIF4G2P78344 907 aaKnown RBP eCLIP9.27□□□□□ -0.93
SMNDC1-205ENST00000477763 ARID5BQ14865 1188 aa9.27□□□□□ -0.93
SMNDC1-205ENST00000477763 VASH1Q7L8A9 365 aaPredicted RBP9.27□□□□□ -0.93
SMNDC1-205ENST00000477763 WASF2Q9Y6W5 498 aa9.27□□□□□ -0.93
SMNDC1-205ENST00000477763 SOX11P35716 441 aa9.26□□□□□ -0.93
SMNDC1-205ENST00000477763 LCE2AQ5TA79 106 aaPredicted RBP9.26□□□□□ -0.93
SMNDC1-205ENST00000477763 PROSER2Q86WR7 435 aaPredicted RBP9.26□□□□□ -0.93
SMNDC1-205ENST00000477763 FNBP4Q8N3X1 1017 aaPredicted RBP9.26□□□□□ -0.93
SMNDC1-205ENST00000477763 PCDHB9Q9Y5E1 797 aa9.26□□□□□ -0.93
SMNDC1-205ENST00000477763 AXIN1O15169 862 aa9.25□□□□□ -0.93
SMNDC1-205ENST00000477763 SMCPP49901 116 aaPredicted RBP9.25□□□□□ -0.93
SMNDC1-205ENST00000477763 VAC14Q08AM6 782 aa9.25□□□□□ -0.93
SMNDC1-205ENST00000477763 KCTD15Q96SI1 283 aaPredicted RBP9.25□□□□□ -0.93
SMNDC1-205ENST00000477763 GMPR2Q9P2T1 348 aaKnown RBP9.25□□□□□ -0.93
SMNDC1-205ENST00000477763 ESPNB1AK53 854 aa9.24□□□□□ -0.93
SMNDC1-205ENST00000477763 CCDC125Q86Z20 511 aa9.24□□□□□ -0.93
SMNDC1-205ENST00000477763 FSHRP23945 695 aa9.23□□□□□ -0.93
SMNDC1-205ENST00000477763 NNTQ13423 1086 aa9.23□□□□□ -0.93
SMNDC1-205ENST00000477763 CTC1Q2NKJ3 1217 aa9.23□□□□□ -0.93
SMNDC1-205ENST00000477763 SEPT12Q8IYM1 358 aa9.23□□□□□ -0.93
SMNDC1-205ENST00000477763 DHX9Q08211 1270 aaKnown RBP9.21□□□□□ -0.94
SMNDC1-205ENST00000477763 INTS6LQ5JSJ4 861 aaKnown RBP9.21□□□□□ -0.94
SMNDC1-205ENST00000477763 TREML4Q6UXN2 200 aa9.21□□□□□ -0.94
SMNDC1-205ENST00000477763 HPS1Q92902 700 aa9.21□□□□□ -0.94
SMNDC1-205ENST00000477763 NR3C2P08235 984 aa9.2□□□□□ -0.94
SMNDC1-205ENST00000477763 RNF20Q5VTR2 975 aa9.2□□□□□ -0.94
SMNDC1-205ENST00000477763 CCDC116Q8IYX3 515 aa9.2□□□□□ -0.94
SMNDC1-205ENST00000477763 ZMYND15Q9H091 742 aa9.2□□□□□ -0.94
SMNDC1-205ENST00000477763 SEMA3FQ13275 785 aa9.19□□□□□ -0.94
SMNDC1-205ENST00000477763 KLF16Q9BXK1 252 aaPredicted RBP9.19□□□□□ -0.94
SMNDC1-205ENST00000477763 ALG2Q9H553 416 aa9.19□□□□□ -0.94
SMNDC1-205ENST00000477763 CEP126Q9P2H0 1117 aa9.19□□□□□ -0.94
SMNDC1-205ENST00000477763 EMILIN1Q9Y6C2 1016 aa9.19□□□□□ -0.94
SMNDC1-205ENST00000477763 C11orf95C9JLR9 678 aaPredicted RBP9.18□□□□□ -0.94
SMNDC1-205ENST00000477763 TRAK2O60296 914 aa9.18□□□□□ -0.94
SMNDC1-205ENST00000477763 GIGYF1O75420 1035 aaPredicted RBP9.18□□□□□ -0.94
SMNDC1-205ENST00000477763 TRIM52Q96A61 297 aa9.18□□□□□ -0.94
SMNDC1-205ENST00000477763 POM121CA8CG34 1229 aa9.16□□□□□ -0.94
SMNDC1-205ENST00000477763 TIMP2P16035 220 aa9.16□□□□□ -0.94
SMNDC1-205ENST00000477763 PPP1R26Q5T8A7 1209 aaPredicted RBP9.16□□□□□ -0.94
SMNDC1-205ENST00000477763 PGPEP1Q9NXJ5 209 aa9.16□□□□□ -0.94
SMNDC1-205ENST00000477763 WDR4P57081 412 aaKnown RBP9.15□□□□□ -0.94
SMNDC1-205ENST00000477763 PHTF2Q8N3S3 785 aa9.15□□□□□ -0.94
SMNDC1-205ENST00000477763 ATP13A2Q9NQ11 1180 aa9.15□□□□□ -0.94
SMNDC1-205ENST00000477763 ERVH48-1M5A8F1 160 aa9.14□□□□□ -0.95
SMNDC1-205ENST00000477763 ZIC2O95409 532 aaPredicted RBP9.14□□□□□ -0.95
SMNDC1-205ENST00000477763 SLFNL1Q499Z3 407 aa9.14□□□□□ -0.95
SMNDC1-205ENST00000477763 ITPKCQ96DU7 683 aa9.14□□□□□ -0.95
SMNDC1-205ENST00000477763 CHIC2Q9UKJ5 165 aa9.14□□□□□ -0.95
SMNDC1-205ENST00000477763 CAPN5O15484 640 aaPredicted RBP9.13□□□□□ -0.95
SMNDC1-205ENST00000477763 SNRPBP14678 240 aaKnown RBP9.13□□□□□ -0.95
SMNDC1-205ENST00000477763 ADAMTS19Q8TE59 1207 aa9.13□□□□□ -0.95
SMNDC1-205ENST00000477763 NFX1Q12986 1120 aaKnown RBP9.12□□□□□ -0.95
SMNDC1-205ENST00000477763 HDGFL1Q5TGJ6 251 aa9.12□□□□□ -0.95
SMNDC1-205ENST00000477763 RNF135Q8IUD6 432 aa9.12□□□□□ -0.95
SMNDC1-205ENST00000477763 NFATC2IPQ8NCF5 419 aa9.12□□□□□ -0.95
SMNDC1-205ENST00000477763 RAB15P59190 212 aa9.11□□□□□ -0.95
SMNDC1-205ENST00000477763 GLMNQ92990 594 aa9.11□□□□□ -0.95
SMNDC1-205ENST00000477763 ZFAND3Q9H8U3 227 aa9.11□□□□□ -0.95
SMNDC1-205ENST00000477763 WFS1O76024 890 aa9.1□□□□□ -0.95
SMNDC1-205ENST00000477763 MAP7D1Q3KQU3 841 aa9.1□□□□□ -0.95
SMNDC1-205ENST00000477763 LCE2CQ5TA81 110 aa9.1□□□□□ -0.95
SMNDC1-205ENST00000477763 Q6ZVU0 165 aa9.1□□□□□ -0.95
SMNDC1-205ENST00000477763 ZNF784Q8NCA9 323 aaPredicted RBP9.1□□□□□ -0.95
SMNDC1-205ENST00000477763 LILRA1O75019 489 aa9.09□□□□□ -0.95
SMNDC1-205ENST00000477763 ERVK-9P63128 1117 aa9.09□□□□□ -0.95
SMNDC1-205ENST00000477763 TRIM47Q96LD4 638 aa9.09□□□□□ -0.95
SMNDC1-205ENST00000477763 CCDC85AQ96PX6 553 aaPredicted RBP9.09□□□□□ -0.95
SMNDC1-205ENST00000477763 TMPRSS4Q9NRS4 437 aa9.09□□□□□ -0.95
SMNDC1-205ENST00000477763 PCDHB11Q9Y5F2 797 aa9.09□□□□□ -0.95
SMNDC1-205ENST00000477763 MEIOBQ8N635 442 aa9.08□□□□□ -0.96
SMNDC1-205ENST00000477763 CALR3Q96L12 384 aaKnown RBP9.08□□□□□ -0.96
SMNDC1-205ENST00000477763 DOLKQ9UPQ8 538 aa9.08□□□□□ -0.96
SMNDC1-205ENST00000477763 LZTS3O60299 673 aaPredicted RBP9.07□□□□□ -0.96
SMNDC1-205ENST00000477763 CC2D2BQ6DHV5 1058 aa9.07□□□□□ -0.96
SMNDC1-205ENST00000477763 PLPP7Q8NBV4 271 aa9.07□□□□□ -0.96
SMNDC1-205ENST00000477763 ZNF777Q9ULD5 760 aaPredicted RBP9.07□□□□□ -0.96
SMNDC1-205ENST00000477763 SUPT5HO00267 1087 aaKnown RBP9.06□□□□□ -0.96
SMNDC1-205ENST00000477763 PIK3CDO00329 1044 aa9.06□□□□□ -0.96
SMNDC1-205ENST00000477763 UCN2Q96RP3 112 aa9.06□□□□□ -0.96
SMNDC1-205ENST00000477763 CYLDQ9NQC7 956 aa9.06□□□□□ -0.96
SMNDC1-205ENST00000477763 MRPL14Q6P1L8 145 aaKnown RBP9.05□□□□□ -0.96
SMNDC1-205ENST00000477763 SIRT1Q96EB6 747 aa9.05□□□□□ -0.96
SMNDC1-205ENST00000477763 TSEN34Q9BSV6 310 aaKnown RBP9.05□□□□□ -0.96
SMNDC1-205ENST00000477763 SENP2Q9HC62 589 aa9.05□□□□□ -0.96
SMNDC1-205ENST00000477763 MYCP01106 439 aaPredicted RBP9.04□□□□□ -0.96
SMNDC1-205ENST00000477763 ADH1AP07327 375 aa9.04□□□□□ -0.96
SMNDC1-205ENST00000477763 SKIP12755 728 aa9.04□□□□□ -0.96
SMNDC1-205ENST00000477763 ADD1P35611 737 aaKnown RBP9.04□□□□□ -0.96
SMNDC1-205ENST00000477763 USP4Q13107 963 aa9.04□□□□□ -0.96
SMNDC1-205ENST00000477763 CBLBQ13191 982 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms