RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 PARP4Q9UKK3 1724 aaKnown RBP14.38□□□□□ -0.11
COL4A5-204ENST00000477429 CCDC61Q9Y6R9 512 aa14.37□□□□□ -0.11
COL4A5-204ENST00000477429 LRRC37A3O60309 1634 aa14.36□□□□□ -0.11
COL4A5-204ENST00000477429 ZBTB7CA1YPR0 619 aa14.35□□□□□ -0.11
COL4A5-204ENST00000477429 CABP2Q9NPB3 220 aa14.35□□□□□ -0.11
COL4A5-204ENST00000477429 AXIN2Q9Y2T1 843 aa14.35□□□□□ -0.11
COL4A5-204ENST00000477429 PCNTO95613 3336 aa14.35□□□□□ -0.11
COL4A5-204ENST00000477429 ZBTB7AO95365 584 aa14.34□□□□□ -0.11
COL4A5-204ENST00000477429 MARCH10Q8NA82 808 aaPredicted RBP14.34□□□□□ -0.11
COL4A5-204ENST00000477429 THRAP3Q9Y2W1 955 aaKnown RBP14.34□□□□□ -0.11
COL4A5-204ENST00000477429 SBF2Q86WG5 1849 aa14.34□□□□□ -0.11
COL4A5-204ENST00000477429 CRB1P82279 1406 aa14.33□□□□□ -0.11
COL4A5-204ENST00000477429 PPIP5K1Q6PFW1 1433 aa14.33□□□□□ -0.11
COL4A5-204ENST00000477429 OVOS2A0A0G2JMS6 1433 aa14.32□□□□□ -0.12
COL4A5-204ENST00000477429 OVOS2A0A0J9YW53 1432 aa14.32□□□□□ -0.12
COL4A5-204ENST00000477429 OVOS2Q6IE36 1432 aa14.32□□□□□ -0.12
COL4A5-204ENST00000477429 COL18A1P39060 1754 aa14.32□□□□□ -0.12
COL4A5-204ENST00000477429 SLIT3O75094 1523 aa14.31□□□□□ -0.12
COL4A5-204ENST00000477429 PLSCR1O15162 318 aa14.31□□□□□ -0.12
COL4A5-204ENST00000477429 NLRP13Q86W25 1043 aa14.31□□□□□ -0.12
COL4A5-204ENST00000477429 NPM3O75607 178 aaKnown RBP14.3□□□□□ -0.12
COL4A5-204ENST00000477429 CABP1Q9NZU7 370 aa14.3□□□□□ -0.12
COL4A5-204ENST00000477429 ATF5Q9Y2D1 282 aaPredicted RBP14.3□□□□□ -0.12
COL4A5-204ENST00000477429 AATKQ6ZMQ8 1374 aa14.3□□□□□ -0.12
COL4A5-204ENST00000477429 USP6P35125 1406 aa14.3□□□□□ -0.12
COL4A5-204ENST00000477429 ATP10DQ9P241 1426 aa14.3□□□□□ -0.12
COL4A5-204ENST00000477429 SRPK2P78362 688 aaKnown RBP14.29□□□□□ -0.12
COL4A5-204ENST00000477429 DDB1Q16531 1140 aa14.29□□□□□ -0.12
COL4A5-204ENST00000477429 BCL11BQ9C0K0 894 aaPredicted RBP14.29□□□□□ -0.12
COL4A5-204ENST00000477429 PIK3C2AO00443 1686 aa14.29□□□□□ -0.12
COL4A5-204ENST00000477429 RGPD3A6NKT7 1758 aaPredicted RBP14.29□□□□□ -0.12
COL4A5-204ENST00000477429 RGPD4Q7Z3J3 1758 aa14.29□□□□□ -0.12
COL4A5-204ENST00000477429 NLRP6P59044 892 aa14.28□□□□□ -0.12
COL4A5-204ENST00000477429 GPR162Q16538 588 aa14.28□□□□□ -0.12
COL4A5-204ENST00000477429 STAC3Q96MF2 364 aa14.28□□□□□ -0.12
COL4A5-204ENST00000477429 TOM1L2Q6ZVM7 507 aa14.27□□□□□ -0.13
COL4A5-204ENST00000477429 WNK3Q9BYP7 1800 aa14.27□□□□□ -0.13
COL4A5-204ENST00000477429 WDR17Q8IZU2 1322 aa14.26□□□□□ -0.13
COL4A5-204ENST00000477429 SGIP1Q9BQI5 828 aa14.26□□□□□ -0.13
COL4A5-204ENST00000477429 WWC3Q9ULE0 1092 aa14.26□□□□□ -0.13
COL4A5-204ENST00000477429 RGPD5Q99666 1765 aa14.25□□□□□ -0.13
COL4A5-204ENST00000477429 CENPJQ9HC77 1338 aaPredicted RBP14.25□□□□□ -0.13
COL4A5-204ENST00000477429 KIAA1210Q9ULL0 1709 aa14.25□□□□□ -0.13
COL4A5-204ENST00000477429 SOX12O15370 315 aa14.25□□□□□ -0.13
COL4A5-204ENST00000477429 TXNRD1Q16881 649 aa14.25□□□□□ -0.13
COL4A5-204ENST00000477429 CPSF1Q10570 1443 aaKnown RBP14.24□□□□□ -0.13
COL4A5-204ENST00000477429 APLP1P51693 650 aa14.24□□□□□ -0.13
COL4A5-204ENST00000477429 ARHGEF25Q86VW2 580 aa14.24□□□□□ -0.13
COL4A5-204ENST00000477429 BCL9O00512 1426 aa14.24□□□□□ -0.13
COL4A5-204ENST00000477429 TNS2Q63HR2 1409 aa14.24□□□□□ -0.13
COL4A5-204ENST00000477429 SLC15A2Q16348 729 aa14.23□□□□□ -0.13
COL4A5-204ENST00000477429 QRICH2Q9H0J4 1663 aa14.23□□□□□ -0.13
COL4A5-204ENST00000477429 NFAT5O94916 1531 aa14.21□□□□□ -0.13
COL4A5-204ENST00000477429 TTC21BQ7Z4L5 1316 aa14.21□□□□□ -0.13
COL4A5-204ENST00000477429 ACSBG1Q96GR2 724 aa14.21□□□□□ -0.13
COL4A5-204ENST00000477429 CARD10Q9BWT7 1032 aa14.21□□□□□ -0.13
COL4A5-204ENST00000477429 GPBP1L1Q9HC44 474 aaPredicted RBP14.21□□□□□ -0.13
COL4A5-204ENST00000477429 BRD4O60885 1362 aaPredicted RBP14.21□□□□□ -0.14
COL4A5-204ENST00000477429 C11orf95C9JLR9 678 aaPredicted RBP14.2□□□□□ -0.14
COL4A5-204ENST00000477429 ZNF827Q17R98 1081 aa14.2□□□□□ -0.14
COL4A5-204ENST00000477429 JMYQ8N9B5 988 aa14.2□□□□□ -0.14
COL4A5-204ENST00000477429 AKAP12Q02952 1782 aa14.19□□□□□ -0.14
COL4A5-204ENST00000477429 PAPPAQ13219 1627 aa14.19□□□□□ -0.14
COL4A5-204ENST00000477429 ZNF526Q8TF50 670 aaPredicted RBP14.19□□□□□ -0.14
COL4A5-204ENST00000477429 STK32BQ9NY57 414 aa14.19□□□□□ -0.14
COL4A5-204ENST00000477429 MAP3K5Q99683 1374 aa14.19□□□□□ -0.14
COL4A5-204ENST00000477429 LRRC4BQ9NT99 713 aa14.18□□□□□ -0.14
COL4A5-204ENST00000477429 WDR90Q96KV7 1748 aa14.18□□□□□ -0.14
COL4A5-204ENST00000477429 TRPM1Q7Z4N2 1603 aa14.17□□□□□ -0.14
COL4A5-204ENST00000477429 EXOC5O00471 708 aa14.17□□□□□ -0.14
COL4A5-204ENST00000477429 CSB-PGBD3P0DP91 1061 aa14.17□□□□□ -0.14
COL4A5-204ENST00000477429 PELP1Q8IZL8 1130 aaKnown RBP14.17□□□□□ -0.14
COL4A5-204ENST00000477429 MTFR1LQ9H019 292 aa14.17□□□□□ -0.14
COL4A5-204ENST00000477429 HTRA3P83110 453 aa14.16□□□□□ -0.14
COL4A5-204ENST00000477429 NHSQ6T4R5 1651 aa14.16□□□□□ -0.14
COL4A5-204ENST00000477429 FAM161AQ3B820 660 aa14.15□□□□□ -0.14
COL4A5-204ENST00000477429 L3MBTL2Q969R5 705 aa14.15□□□□□ -0.14
COL4A5-204ENST00000477429 CDCA7Q9BWT1 371 aaPredicted RBP14.15□□□□□ -0.14
COL4A5-204ENST00000477429 KIF3CO14782 793 aa14.14□□□□□ -0.15
COL4A5-204ENST00000477429 KCNQ4P56696 695 aa14.14□□□□□ -0.15
COL4A5-204ENST00000477429 KLRG1Q96E93 195 aa14.14□□□□□ -0.15
COL4A5-204ENST00000477429 ARXQ96QS3 562 aa14.14□□□□□ -0.15
COL4A5-204ENST00000477429 ADCY9O60503 1353 aa14.13□□□□□ -0.15
COL4A5-204ENST00000477429 NME9Q86XW9 330 aa14.13□□□□□ -0.15
COL4A5-204ENST00000477429 EVC2Q86UK5 1308 aa14.13□□□□□ -0.15
COL4A5-204ENST00000477429 CD163L1Q9NR16 1453 aa14.12□□□□□ -0.15
COL4A5-204ENST00000477429 CCDC7Q96M83 1385 aa14.12□□□□□ -0.15
COL4A5-204ENST00000477429 ABCC6O95255 1503 aa14.12□□□□□ -0.15
COL4A5-204ENST00000477429 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.12□□□□□ -0.15
COL4A5-204ENST00000477429 KCNH5Q8NCM2 988 aa14.12□□□□□ -0.15
COL4A5-204ENST00000477429 BTAF1O14981 1849 aa14.12□□□□□ -0.15
COL4A5-204ENST00000477429 ERBB3P21860 1342 aa14.12□□□□□ -0.15
COL4A5-204ENST00000477429 ZBTB22O15209 634 aa14.11□□□□□ -0.15
COL4A5-204ENST00000477429 YBX3P16989 372 aaKnown RBP eCLIP14.11□□□□□ -0.15
COL4A5-204ENST00000477429 AKT1S1Q96B36 256 aa14.11□□□□□ -0.15
COL4A5-204ENST00000477429 SIN3AQ96ST3 1273 aa14.11□□□□□ -0.15
COL4A5-204ENST00000477429 KTN1Q86UP2 1357 aaKnown RBP14.1□□□□□ -0.15
COL4A5-204ENST00000477429 NLGN2Q8NFZ4 835 aa14.1□□□□□ -0.15
COL4A5-204ENST00000477429 NLRP2Q9NX02 1062 aa14.1□□□□□ -0.15
COL4A5-204ENST00000477429 TTC21AQ8NDW8 1320 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms