RNA–Protein interactions for RNA: ENST00000477203.6

HDAC7-221, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 3,122 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-221ENST00000477203 MCM10Q7L590 875 aa17.18■□□□□ 0.34
HDAC7-221ENST00000477203 SIRT1Q96EB6 747 aa17.18■□□□□ 0.34
HDAC7-221ENST00000477203 NOB1Q9ULX3 412 aaKnown RBP17.18■□□□□ 0.34
HDAC7-221ENST00000477203 NFE2L2Q16236 605 aa17.17■□□□□ 0.34
HDAC7-221ENST00000477203 ABTB2Q8N961 1025 aa17.17■□□□□ 0.34
HDAC7-221ENST00000477203 MIS18AQ9NYP9 233 aa17.17■□□□□ 0.34
HDAC7-221ENST00000477203 PNPLA6Q8IY17 1366 aa17.17■□□□□ 0.34
HDAC7-221ENST00000477203 KRT24Q2M2I5 525 aa17.17■□□□□ 0.34
HDAC7-221ENST00000477203 PNNQ9H307 717 aaKnown RBP17.16■□□□□ 0.34
HDAC7-221ENST00000477203 ANKRD26Q9UPS8 1709 aa17.16■□□□□ 0.34
HDAC7-221ENST00000477203 CDC42BPGQ6DT37 1551 aa17.16■□□□□ 0.34
HDAC7-221ENST00000477203 FOXO3O43524 673 aa17.16■□□□□ 0.34
HDAC7-221ENST00000477203 ESCO1Q5FWF5 840 aa17.16■□□□□ 0.34
HDAC7-221ENST00000477203 CENPQQ7L2Z9 268 aaPredicted RBP17.16■□□□□ 0.34
HDAC7-221ENST00000477203 PCDHB15Q9Y5E8 787 aa17.16■□□□□ 0.34
HDAC7-221ENST00000477203 PLEKHG3A1L390 1219 aa17.15■□□□□ 0.34
HDAC7-221ENST00000477203 ANP32AP39687 249 aaKnown RBP17.15■□□□□ 0.34
HDAC7-221ENST00000477203 KDM2BQ8NHM5 1336 aa17.15■□□□□ 0.34
HDAC7-221ENST00000477203 MAP3K19Q56UN5 1328 aa17.15■□□□□ 0.34
HDAC7-221ENST00000477203 ZKSCAN2Q63HK3 967 aa17.14■□□□□ 0.34
HDAC7-221ENST00000477203 MED14O60244 1454 aa17.14■□□□□ 0.33
HDAC7-221ENST00000477203 PDE3AQ14432 1141 aa17.14■□□□□ 0.33
HDAC7-221ENST00000477203 USHBP1Q8N6Y0 703 aa17.14■□□□□ 0.33
HDAC7-221ENST00000477203 TRIM27P14373 513 aa17.14■□□□□ 0.33
HDAC7-221ENST00000477203 USP6P35125 1406 aa17.14■□□□□ 0.33
HDAC7-221ENST00000477203 ITSN1Q15811 1721 aa17.13■□□□□ 0.33
HDAC7-221ENST00000477203 DZIP1LQ8IYY4 767 aaKnown RBP17.13■□□□□ 0.33
HDAC7-221ENST00000477203 MBIPQ9NS73 344 aa17.12■□□□□ 0.33
HDAC7-221ENST00000477203 BACH2Q9BYV9 841 aa17.11■□□□□ 0.33
HDAC7-221ENST00000477203 C8orf58Q8NAV2 365 aa17.1■□□□□ 0.33
HDAC7-221ENST00000477203 TMEM57Q8N5G2 664 aa17.1■□□□□ 0.33
HDAC7-221ENST00000477203 C1orf115Q9H7X2 142 aa17.1■□□□□ 0.33
HDAC7-221ENST00000477203 KNDC1Q76NI1 1749 aa17.1■□□□□ 0.33
HDAC7-221ENST00000477203 PSME1Q06323 249 aa17.1■□□□□ 0.33
HDAC7-221ENST00000477203 ORAI2Q96SN7 254 aa17.1■□□□□ 0.33
HDAC7-221ENST00000477203 ARHGAP23Q9P227 1491 aa17.09■□□□□ 0.33
HDAC7-221ENST00000477203 ADGRB2O60241 1585 aa17.09■□□□□ 0.33
HDAC7-221ENST00000477203 ZBTB47Q9UFB7 747 aaPredicted RBP17.09■□□□□ 0.33
HDAC7-221ENST00000477203 PHF8Q9UPP1 1060 aa17.09■□□□□ 0.33
HDAC7-221ENST00000477203 SLIT1O75093 1534 aa17.09■□□□□ 0.33
HDAC7-221ENST00000477203 CEP170BQ9Y4F5 1589 aaPredicted RBP17.09■□□□□ 0.33
HDAC7-221ENST00000477203 HSPA2P54652 639 aa17.08■□□□□ 0.33
HDAC7-221ENST00000477203 MVPQ14764 893 aaKnown RBP17.07■□□□□ 0.32
HDAC7-221ENST00000477203 ATF7IPQ6VMQ6 1270 aa17.07■□□□□ 0.32
HDAC7-221ENST00000477203 NECTIN2Q92692 538 aa17.07■□□□□ 0.32
HDAC7-221ENST00000477203 MON2Q7Z3U7 1717 aa17.07■□□□□ 0.32
HDAC7-221ENST00000477203 DIP2AQ14689 1571 aa17.07■□□□□ 0.32
HDAC7-221ENST00000477203 SLC4A3P48751 1232 aa17.07■□□□□ 0.32
HDAC7-221ENST00000477203 DDX17Q92841 729 aaKnown RBP17.07■□□□□ 0.32
HDAC7-221ENST00000477203 AKAP12Q02952 1782 aa17.06■□□□□ 0.32
HDAC7-221ENST00000477203 TWISTNBQ3B726 338 aaPredicted RBP17.06■□□□□ 0.32
HDAC7-221ENST00000477203 CDK12Q9NYV4 1490 aaPredicted RBP17.06■□□□□ 0.32
HDAC7-221ENST00000477203 AATKQ6ZMQ8 1374 aa17.06■□□□□ 0.32
HDAC7-221ENST00000477203 EYA1Q99502 592 aa17.06■□□□□ 0.32
HDAC7-221ENST00000477203 GNAI1P63096 354 aa17.05■□□□□ 0.32
HDAC7-221ENST00000477203 PROSER2Q86WR7 435 aaPredicted RBP17.05■□□□□ 0.32
HDAC7-221ENST00000477203 VAMP4O75379 141 aa17.04■□□□□ 0.32
HDAC7-221ENST00000477203 MTHFSDQ2M296 383 aaKnown RBP17.04■□□□□ 0.32
HDAC7-221ENST00000477203 OVOS2A0A0J9YW53 1432 aa17.04■□□□□ 0.32
HDAC7-221ENST00000477203 OVOS2Q6IE36 1432 aa17.04■□□□□ 0.32
HDAC7-221ENST00000477203 BRPF3Q9ULD4 1205 aa17.03■□□□□ 0.32
HDAC7-221ENST00000477203 PDZRN3Q9UPQ7 1066 aa17.03■□□□□ 0.32
HDAC7-221ENST00000477203 DLG5Q8TDM6 1919 aa17.02■□□□□ 0.32
HDAC7-221ENST00000477203 MS4A1P11836 297 aa17.02■□□□□ 0.31
HDAC7-221ENST00000477203 DNAJC5Q9H3Z4 198 aa17.02■□□□□ 0.31
HDAC7-221ENST00000477203 IL16Q14005 1332 aa17.02■□□□□ 0.31
HDAC7-221ENST00000477203 RTF1Q92541 710 aaKnown RBP17.01■□□□□ 0.31
HDAC7-221ENST00000477203 IPO9Q96P70 1041 aaKnown RBP17.01■□□□□ 0.31
HDAC7-221ENST00000477203 CFAP44Q96MT7 982 aa17.01■□□□□ 0.31
HDAC7-221ENST00000477203 PTCH1Q13635 1447 aa17.01■□□□□ 0.31
HDAC7-221ENST00000477203 TTC21AQ8NDW8 1320 aa17■□□□□ 0.31
HDAC7-221ENST00000477203 LRRC59Q96AG4 307 aaKnown RBP17■□□□□ 0.31
HDAC7-221ENST00000477203 IFT57Q9NWB7 429 aa17■□□□□ 0.31
HDAC7-221ENST00000477203 HOXC9P31274 260 aa17■□□□□ 0.31
HDAC7-221ENST00000477203 PEAK1Q9H792 1746 aa17■□□□□ 0.31
HDAC7-221ENST00000477203 IPO8O15397 1037 aaKnown RBP16.99■□□□□ 0.31
HDAC7-221ENST00000477203 LMOD3Q0VAK6 560 aa16.99■□□□□ 0.31
HDAC7-221ENST00000477203 PKNOX2Q96KN3 472 aa16.99■□□□□ 0.31
HDAC7-221ENST00000477203 CALD1Q05682 793 aaKnown RBP16.99■□□□□ 0.31
HDAC7-221ENST00000477203 RWDD1Q9H446 243 aaPredicted RBP16.99■□□□□ 0.31
HDAC7-221ENST00000477203 C8orf34Q49A92 452 aa16.99■□□□□ 0.31
HDAC7-221ENST00000477203 FAM161AQ3B820 660 aa16.98■□□□□ 0.31
HDAC7-221ENST00000477203 FLT4P35916 1363 aa16.98■□□□□ 0.31
HDAC7-221ENST00000477203 SEC24BO95487 1268 aa16.97■□□□□ 0.31
HDAC7-221ENST00000477203 MRPL50Q8N5N7 158 aaKnown RBP16.97■□□□□ 0.31
HDAC7-221ENST00000477203 TSPYL4Q9UJ04 414 aa16.97■□□□□ 0.31
HDAC7-221ENST00000477203 DDX19BQ9UMR2 479 aa16.97■□□□□ 0.31
HDAC7-221ENST00000477203 KIF16BQ96L93 1317 aa16.97■□□□□ 0.31
HDAC7-221ENST00000477203 APBB1O00213 710 aa16.97■□□□□ 0.31
HDAC7-221ENST00000477203 ZC3H6P61129 1189 aaKnown RBP16.97■□□□□ 0.31
HDAC7-221ENST00000477203 SSH2Q76I76 1423 aa16.96■□□□□ 0.31
HDAC7-221ENST00000477203 CT47B1P0C2W7 299 aaPredicted RBP16.96■□□□□ 0.31
HDAC7-221ENST00000477203 TOPAZ1Q8N9V7 1692 aa16.96■□□□□ 0.31
HDAC7-221ENST00000477203 ZNF853P0CG23 659 aa16.96■□□□□ 0.31
HDAC7-221ENST00000477203 SLC4A10Q6U841 1118 aa16.96■□□□□ 0.31
HDAC7-221ENST00000477203 NPHP4O75161 1426 aaPredicted RBP16.95■□□□□ 0.3
HDAC7-221ENST00000477203 LNPKQ9C0E8 428 aa16.95■□□□□ 0.3
HDAC7-221ENST00000477203 SBNO1A3KN83 1393 aa16.95■□□□□ 0.3
HDAC7-221ENST00000477203 USP31Q70CQ4 1352 aa16.95■□□□□ 0.3
HDAC7-221ENST00000477203 NRKQ7Z2Y5 1582 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms