RNA–Protein interactions for RNA: ENST00000475346.1

RPSA-205, Transcript of ribosomal protein SA, humanhuman

TSL 1 (best)

Gene RPSA, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-205ENST00000475346 USP17L12C9JPN9 530 aa8.22□□□□□ -1.09
RPSA-205ENST00000475346 USP17L11C9JVI0 530 aa8.22□□□□□ -1.09
RPSA-205ENST00000475346 USP17L21D6R901 530 aa8.22□□□□□ -1.09
RPSA-205ENST00000475346 USP17L18D6R9N7 530 aa8.22□□□□□ -1.09
RPSA-205ENST00000475346 USP17L22D6RA61 530 aa8.22□□□□□ -1.09
RPSA-205ENST00000475346 USP17L17D6RBQ6 530 aa8.22□□□□□ -1.09
RPSA-205ENST00000475346 USP17L19D6RCP7 530 aa8.22□□□□□ -1.09
RPSA-205ENST00000475346 USP17L20D6RJB6 530 aa8.22□□□□□ -1.09
RPSA-205ENST00000475346 GFRA3O60609 400 aa8.22□□□□□ -1.09
RPSA-205ENST00000475346 USP17L24Q0WX57 530 aa8.22□□□□□ -1.09
RPSA-205ENST00000475346 CRTC2Q53ET0 693 aaPredicted RBP8.22□□□□□ -1.09
RPSA-205ENST00000475346 DNAJC14Q6Y2X3 702 aaPredicted RBP8.22□□□□□ -1.09
RPSA-205ENST00000475346 LIAT1Q6ZQX7 453 aa8.22□□□□□ -1.09
RPSA-205ENST00000475346 RETREG3Q86VR2 466 aa8.22□□□□□ -1.09
RPSA-205ENST00000475346 NFATC2IPQ8NCF5 419 aa8.22□□□□□ -1.09
RPSA-205ENST00000475346 MRRFQ96E11 262 aaKnown RBP8.22□□□□□ -1.09
RPSA-205ENST00000475346 SALL2Q9Y467 1007 aaPredicted RBP8.22□□□□□ -1.09
RPSA-205ENST00000475346 V9GY48 417 aaPredicted RBP8.22□□□□□ -1.09
RPSA-205ENST00000475346 SSFA2P28290 1259 aa8.21□□□□□ -1.1
RPSA-205ENST00000475346 FAM174AQ8TBP5 190 aa8.21□□□□□ -1.1
RPSA-205ENST00000475346 EMID1Q96A84 441 aaPredicted RBP8.21□□□□□ -1.1
RPSA-205ENST00000475346 KIAA1522Q9P206 1035 aaPredicted RBP8.21□□□□□ -1.1
RPSA-205ENST00000475346 SLAIN2Q9P270 581 aa8.21□□□□□ -1.1
RPSA-205ENST00000475346 MKRN1Q9UHC7 482 aaKnown RBP8.21□□□□□ -1.1
RPSA-205ENST00000475346 SOWAHDA6NJG2 315 aa8.2□□□□□ -1.1
RPSA-205ENST00000475346 FAM196BA6NMK8 535 aa8.2□□□□□ -1.1
RPSA-205ENST00000475346 SERPINB4P48594 390 aa8.2□□□□□ -1.1
RPSA-205ENST00000475346 MSS51Q4VC12 460 aa8.2□□□□□ -1.1
RPSA-205ENST00000475346 LARP1Q6PKG0 1096 aaKnown RBP8.2□□□□□ -1.1
RPSA-205ENST00000475346 PLEKHM2Q8IWE5 1019 aa8.2□□□□□ -1.1
RPSA-205ENST00000475346 ZBTB24O43167 697 aaPredicted RBP8.19□□□□□ -1.1
RPSA-205ENST00000475346 ERCC3P19447 782 aa8.19□□□□□ -1.1
RPSA-205ENST00000475346 RASA1P20936 1047 aa8.19□□□□□ -1.1
RPSA-205ENST00000475346 ZNF697Q5TEC3 545 aa8.19□□□□□ -1.1
RPSA-205ENST00000475346 FAM200AQ8TCP9 573 aa8.19□□□□□ -1.1
RPSA-205ENST00000475346 BCL2L13Q9BXK5 485 aa8.19□□□□□ -1.1
RPSA-205ENST00000475346 IGSF5Q9NSI5 407 aa8.19□□□□□ -1.1
RPSA-205ENST00000475346 BIN2Q9UBW5 565 aaPredicted RBP8.19□□□□□ -1.1
RPSA-205ENST00000475346 FKBPLQ9UIM3 349 aa8.19□□□□□ -1.1
RPSA-205ENST00000475346 MARSP56192 900 aaKnown RBP8.18□□□□□ -1.1
RPSA-205ENST00000475346 FOXC1Q12948 553 aa8.18□□□□□ -1.1
RPSA-205ENST00000475346 SPRYD7Q5W111 196 aa8.18□□□□□ -1.1
RPSA-205ENST00000475346 LYPD8Q6UX82 237 aa8.18□□□□□ -1.1
RPSA-205ENST00000475346 Q6ZNB5 142 aa8.18□□□□□ -1.1
RPSA-205ENST00000475346 PDZRN3Q9UPQ7 1066 aa8.18□□□□□ -1.1
RPSA-205ENST00000475346 TNFRSF10AO00220 468 aa8.17□□□□□ -1.1
RPSA-205ENST00000475346 ZNF16P17020 682 aaPredicted RBP8.17□□□□□ -1.1
RPSA-205ENST00000475346 ATP2B4P23634 1241 aa8.17□□□□□ -1.1
RPSA-205ENST00000475346 PTK7Q13308 1070 aa8.17□□□□□ -1.1
RPSA-205ENST00000475346 NCOA4Q13772 614 aa8.17□□□□□ -1.1
RPSA-205ENST00000475346 NOM1Q5C9Z4 860 aaKnown RBP8.17□□□□□ -1.1
RPSA-205ENST00000475346 DESI1Q6ICB0 168 aa8.17□□□□□ -1.1
RPSA-205ENST00000475346 CLP1Q92989 425 aaKnown RBP8.17□□□□□ -1.1
RPSA-205ENST00000475346 JUNDP17535 347 aa8.16□□□□□ -1.1
RPSA-205ENST00000475346 SCNN1AP37088 669 aa8.16□□□□□ -1.1
RPSA-205ENST00000475346 FAM69CQ0P6D2 419 aa8.16□□□□□ -1.1
RPSA-205ENST00000475346 SLFNL1Q499Z3 407 aa8.16□□□□□ -1.1
RPSA-205ENST00000475346 GIPC2Q8TF65 315 aa8.16□□□□□ -1.1
RPSA-205ENST00000475346 ATP5J2-PTCD1G3V325 749 aa8.15□□□□□ -1.1
RPSA-205ENST00000475346 DXOO77932 396 aaKnown RBP8.15□□□□□ -1.1
RPSA-205ENST00000475346 MMP16P51512 607 aa8.15□□□□□ -1.1
RPSA-205ENST00000475346 ZNF598Q86UK7 904 aaKnown RBP8.15□□□□□ -1.1
RPSA-205ENST00000475346 ANKMY2Q8IV38 441 aa8.15□□□□□ -1.1
RPSA-205ENST00000475346 SIRT1Q96EB6 747 aa8.15□□□□□ -1.1
RPSA-205ENST00000475346 CDCA7Q9BWT1 371 aaPredicted RBP8.15□□□□□ -1.1
RPSA-205ENST00000475346 MAP10Q9P2G4 905 aa8.15□□□□□ -1.1
RPSA-205ENST00000475346 CD2BP2O95400 341 aaKnown RBP8.14□□□□□ -1.11
RPSA-205ENST00000475346 RNF135Q8IUD6 432 aa8.14□□□□□ -1.11
RPSA-205ENST00000475346 KCNH2Q12809 1159 aa8.13□□□□□ -1.11
RPSA-205ENST00000475346 DPYDQ12882 1025 aa8.13□□□□□ -1.11
RPSA-205ENST00000475346 PLPP7Q8NBV4 271 aa8.13□□□□□ -1.11
RPSA-205ENST00000475346 ZNF594Q96JF6 807 aaPredicted RBP8.13□□□□□ -1.11
RPSA-205ENST00000475346 NUDT12Q9BQG2 462 aa8.13□□□□□ -1.11
RPSA-205ENST00000475346 CEP126Q9P2H0 1117 aa8.13□□□□□ -1.11
RPSA-205ENST00000475346 ZC3H4Q9UPT8 1303 aaKnown RBP8.12□□□□□ -1.11
RPSA-205ENST00000475346 ANKRD33BA6NCL7 494 aa8.12□□□□□ -1.11
RPSA-205ENST00000475346 PCDHB9Q9Y5E1 797 aa8.12□□□□□ -1.11
RPSA-205ENST00000475346 F12P00748 615 aaPredicted RBP8.11□□□□□ -1.11
RPSA-205ENST00000475346 CTHP32929 405 aa8.11□□□□□ -1.11
RPSA-205ENST00000475346 RPIAP49247 311 aa8.11□□□□□ -1.11
RPSA-205ENST00000475346 OGFOD1Q8N543 542 aa8.11□□□□□ -1.11
RPSA-205ENST00000475346 ABL1P00519 1130 aa8.1□□□□□ -1.11
RPSA-205ENST00000475346 TCF3P15923 654 aa8.1□□□□□ -1.11
RPSA-205ENST00000475346 TRIM32Q13049 653 aa8.1□□□□□ -1.11
RPSA-205ENST00000475346 SWI5Q1ZZU3 235 aa8.1□□□□□ -1.11
RPSA-205ENST00000475346 EML3Q32P44 896 aa8.1□□□□□ -1.11
RPSA-205ENST00000475346 TRIM67Q6ZTA4 783 aa8.1□□□□□ -1.11
RPSA-205ENST00000475346 NRG2O14511 850 aaPredicted RBP8.09□□□□□ -1.11
RPSA-205ENST00000475346 PRMT3O60678 531 aa8.09□□□□□ -1.11
RPSA-205ENST00000475346 LAPTM4AQ15012 233 aa8.09□□□□□ -1.11
RPSA-205ENST00000475346 PTCRAQ6ISU1 281 aaPredicted RBP8.09□□□□□ -1.11
RPSA-205ENST00000475346 NPAS4Q8IUM7 802 aa8.09□□□□□ -1.11
RPSA-205ENST00000475346 FAM187AA6NFU0 413 aa8.08□□□□□ -1.12
RPSA-205ENST00000475346 H3BRB1 525 aa8.08□□□□□ -1.12
RPSA-205ENST00000475346 HMGB1P09429 215 aaKnown RBP8.08□□□□□ -1.12
RPSA-205ENST00000475346 CCNYL3P0C7X3 344 aa8.08□□□□□ -1.12
RPSA-205ENST00000475346 CLDN10P78369 228 aa8.08□□□□□ -1.12
RPSA-205ENST00000475346 PTK2Q05397 1052 aa8.08□□□□□ -1.12
RPSA-205ENST00000475346 ZNF211Q13398 564 aaPredicted RBP8.08□□□□□ -1.12
RPSA-205ENST00000475346 LINC01559Q495D7 138 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms