RNA–Protein interactions for RNA: ENST00000475184.5

ITGB1-211, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-211ENST00000475184 NBPF1Q3BBV0 1214 aa23.12■■□□□ 1.29
ITGB1-211ENST00000475184 CABP2Q9NPB3 220 aa23.12■■□□□ 1.29
ITGB1-211ENST00000475184 CENPJQ9HC77 1338 aaPredicted RBP23.11■■□□□ 1.29
ITGB1-211ENST00000475184 MYOM1P52179 1685 aa23.11■■□□□ 1.29
ITGB1-211ENST00000475184 NLRP6P59044 892 aa23.1■■□□□ 1.29
ITGB1-211ENST00000475184 TOM1L2Q6ZVM7 507 aa23.1■■□□□ 1.29
ITGB1-211ENST00000475184 BCL11BQ9C0K0 894 aaPredicted RBP23.1■■□□□ 1.29
ITGB1-211ENST00000475184 PTF1AQ7RTS3 328 aa23.09■■□□□ 1.29
ITGB1-211ENST00000475184 BCL9O00512 1426 aa23.07■■□□□ 1.28
ITGB1-211ENST00000475184 WDR17Q8IZU2 1322 aa23.07■■□□□ 1.28
ITGB1-211ENST00000475184 PDGFDQ9GZP0 370 aaPredicted RBP23.06■■□□□ 1.28
ITGB1-211ENST00000475184 CABP1Q9NZU7 370 aa23.06■■□□□ 1.28
ITGB1-211ENST00000475184 CPSF1Q10570 1443 aaKnown RBP23.06■■□□□ 1.28
ITGB1-211ENST00000475184 CHD4Q14839 1912 aa23.06■■□□□ 1.28
ITGB1-211ENST00000475184 PROM2Q8N271 834 aa23.05■■□□□ 1.28
ITGB1-211ENST00000475184 MARCH10Q8NA82 808 aaPredicted RBP23.05■■□□□ 1.28
ITGB1-211ENST00000475184 ZBTB7AO95365 584 aa23.04■■□□□ 1.28
ITGB1-211ENST00000475184 CDCA7Q9BWT1 371 aaPredicted RBP23.04■■□□□ 1.28
ITGB1-211ENST00000475184 AXIN2Q9Y2T1 843 aa23.04■■□□□ 1.28
ITGB1-211ENST00000475184 KAT6BQ8WYB5 2073 aa23.02■■□□□ 1.28
ITGB1-211ENST00000475184 PTGER2P43116 358 aa23.01■■□□□ 1.27
ITGB1-211ENST00000475184 TRPM1Q7Z4N2 1603 aa23■■□□□ 1.27
ITGB1-211ENST00000475184 ARHGEF25Q86VW2 580 aa22.99■■□□□ 1.27
ITGB1-211ENST00000475184 CARD10Q9BWT7 1032 aa22.99■■□□□ 1.27
ITGB1-211ENST00000475184 STK32BQ9NY57 414 aa22.99■■□□□ 1.27
ITGB1-211ENST00000475184 NHSQ6T4R5 1651 aa22.99■■□□□ 1.27
ITGB1-211ENST00000475184 TXNRD1Q16881 649 aa22.98■■□□□ 1.27
ITGB1-211ENST00000475184 ATF5Q9Y2D1 282 aaPredicted RBP22.98■■□□□ 1.27
ITGB1-211ENST00000475184 CSB-PGBD3P0DP91 1061 aa22.97■■□□□ 1.27
ITGB1-211ENST00000475184 KCNH5Q8NCM2 988 aa22.97■■□□□ 1.27
ITGB1-211ENST00000475184 NFAT5O94916 1531 aa22.97■■□□□ 1.27
ITGB1-211ENST00000475184 EVC2Q86UK5 1308 aa22.96■■□□□ 1.27
ITGB1-211ENST00000475184 SOX12O15370 315 aa22.95■■□□□ 1.26
ITGB1-211ENST00000475184 ABCC6O95255 1503 aa22.95■■□□□ 1.26
ITGB1-211ENST00000475184 SLC15A2Q16348 729 aa22.95■■□□□ 1.26
ITGB1-211ENST00000475184 TNS2Q63HR2 1409 aa22.95■■□□□ 1.26
ITGB1-211ENST00000475184 TTC21BQ7Z4L5 1316 aa22.95■■□□□ 1.26
ITGB1-211ENST00000475184 EXOC5O00471 708 aa22.94■■□□□ 1.26
ITGB1-211ENST00000475184 ZNF784Q8NCA9 323 aaPredicted RBP22.94■■□□□ 1.26
ITGB1-211ENST00000475184 FHDC1Q9C0D6 1143 aaPredicted RBP22.94■■□□□ 1.26
ITGB1-211ENST00000475184 CCDC7Q96M83 1385 aa22.93■■□□□ 1.26
ITGB1-211ENST00000475184 MTFR1LQ9H019 292 aa22.93■■□□□ 1.26
ITGB1-211ENST00000475184 BTAF1O14981 1849 aa22.93■■□□□ 1.26
ITGB1-211ENST00000475184 TTC21AQ8NDW8 1320 aa22.92■■□□□ 1.26
ITGB1-211ENST00000475184 MON2Q7Z3U7 1717 aa22.92■■□□□ 1.26
ITGB1-211ENST00000475184 SYT17Q9BSW7 474 aa22.92■■□□□ 1.26
ITGB1-211ENST00000475184 ZNF692Q9BU19 519 aaPredicted RBP22.92■■□□□ 1.26
ITGB1-211ENST00000475184 PAPPAQ13219 1627 aa22.92■■□□□ 1.26
ITGB1-211ENST00000475184 LTN1O94822 1766 aa22.91■■□□□ 1.26
ITGB1-211ENST00000475184 SGIP1Q9BQI5 828 aa22.9■■□□□ 1.26
ITGB1-211ENST00000475184 USP54Q70EL1 1684 aa22.88■■□□□ 1.25
ITGB1-211ENST00000475184 GOLGB1Q14789 3259 aaKnown RBP22.88■■□□□ 1.25
ITGB1-211ENST00000475184 KTN1Q86UP2 1357 aaKnown RBP22.86■■□□□ 1.25
ITGB1-211ENST00000475184 ACSBG1Q96GR2 724 aa22.85■■□□□ 1.25
ITGB1-211ENST00000475184 ARXQ96QS3 562 aa22.84■■□□□ 1.25
ITGB1-211ENST00000475184 QSER1Q2KHR3 1735 aa22.84■■□□□ 1.25
ITGB1-211ENST00000475184 MAP3K5Q99683 1374 aa22.84■■□□□ 1.25
ITGB1-211ENST00000475184 L3MBTL2Q969R5 705 aa22.83■■□□□ 1.25
ITGB1-211ENST00000475184 ERBB3P21860 1342 aa22.82■■□□□ 1.24
ITGB1-211ENST00000475184 ROCK2O75116 1388 aaKnown RBP22.81■■□□□ 1.24
ITGB1-211ENST00000475184 NLRP2Q9NX02 1062 aa22.81■■□□□ 1.24
ITGB1-211ENST00000475184 IL2RBP14784 551 aa22.8■■□□□ 1.24
ITGB1-211ENST00000475184 USP31Q70CQ4 1352 aa22.79■■□□□ 1.24
ITGB1-211ENST00000475184 ZNF827Q17R98 1081 aa22.79■■□□□ 1.24
ITGB1-211ENST00000475184 TUBGCP6Q96RT7 1819 aa22.79■■□□□ 1.24
ITGB1-211ENST00000475184 COL24A1Q17RW2 1714 aa22.79■■□□□ 1.24
ITGB1-211ENST00000475184 SENP3-EIF4A1A0A087X0R7 540 aa22.78■■□□□ 1.24
ITGB1-211ENST00000475184 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.78■■□□□ 1.249e-7■■■□□ 16.9
ITGB1-211ENST00000475184 C1QTNF8P60827 252 aa22.77■■□□□ 1.24
ITGB1-211ENST00000475184 LRRC4BQ9NT99 713 aa22.76■■□□□ 1.23
ITGB1-211ENST00000475184 FAM208AQ9UK61 1670 aaKnown RBP22.75■■□□□ 1.23
ITGB1-211ENST00000475184 CD163L1Q9NR16 1453 aa22.74■■□□□ 1.23
ITGB1-211ENST00000475184 NME9Q86XW9 330 aa22.74■■□□□ 1.23
ITGB1-211ENST00000475184 CEP350Q5VT06 3117 aa22.74■■□□□ 1.23
ITGB1-211ENST00000475184 SBNO2Q9Y2G9 1366 aa22.74■■□□□ 1.23
ITGB1-211ENST00000475184 GPR162Q16538 588 aa22.73■■□□□ 1.23
ITGB1-211ENST00000475184 ANKRD24Q8TF21 1146 aa22.73■■□□□ 1.23
ITGB1-211ENST00000475184 DOT1LQ8TEK3 1739 aa22.71■■□□□ 1.23
ITGB1-211ENST00000475184 SLC16A10Q8TF71 515 aa22.71■■□□□ 1.23
ITGB1-211ENST00000475184 AKT1S1Q96B36 256 aa22.71■■□□□ 1.23
ITGB1-211ENST00000475184 LY75O60449 1722 aa22.71■■□□□ 1.23
ITGB1-211ENST00000475184 SLC27A3Q5K4L6 730 aa22.7■■□□□ 1.22
ITGB1-211ENST00000475184 KLHL34Q8N239 644 aa22.7■■□□□ 1.22
ITGB1-211ENST00000475184 POLD1P28340 1107 aa22.69■■□□□ 1.22
ITGB1-211ENST00000475184 EDC4Q6P2E9 1401 aaKnown RBP22.68■■□□□ 1.22
ITGB1-211ENST00000475184 SIN3AQ96ST3 1273 aa22.68■■□□□ 1.22
ITGB1-211ENST00000475184 PNPLA7Q6ZV29 1317 aa22.67■■□□□ 1.22
ITGB1-211ENST00000475184 RGPD2P0DJD1 1756 aa22.67■■□□□ 1.22
ITGB1-211ENST00000475184 SHANK3Q9BYB0 1731 aa22.67■■□□□ 1.22
ITGB1-211ENST00000475184 HDGFL2Q7Z4V5 671 aaPredicted RBP22.66■■□□□ 1.22
ITGB1-211ENST00000475184 DDX54Q8TDD1 881 aaKnown RBP22.66■■□□□ 1.22
ITGB1-211ENST00000475184 TMC1Q8TDI8 760 aa22.66■■□□□ 1.22
ITGB1-211ENST00000475184 GIGYF1O75420 1035 aaPredicted RBP22.65■■□□□ 1.22
ITGB1-211ENST00000475184 PELP1Q8IZL8 1130 aaKnown RBP22.65■■□□□ 1.22
ITGB1-211ENST00000475184 TFCP2L1Q9NZI6 479 aa22.64■■□□□ 1.21
ITGB1-211ENST00000475184 NEUROD1Q13562 356 aa22.63■■□□□ 1.21
ITGB1-211ENST00000475184 SLC12A5Q9H2X9 1139 aa22.63■■□□□ 1.21
ITGB1-211ENST00000475184 A0A1W2PP64 1363 aa22.63■■□□□ 1.21
ITGB1-211ENST00000475184 KCNQ4P56696 695 aa22.62■■□□□ 1.21
ITGB1-211ENST00000475184 IP6K1Q92551 441 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms