RNA–Protein interactions for RNA: ENST00000474871.5

NPHP3-206, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 4,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-206ENST00000474871 MIA2Q96PC5 1412 aa6.08□□□□□ -1.44
NPHP3-206ENST00000474871 EIF5P55010 431 aaKnown RBP6.08□□□□□ -1.44
NPHP3-206ENST00000474871 PIK3R5Q8WYR1 880 aa6.08□□□□□ -1.44
NPHP3-206ENST00000474871 SMC4Q9NTJ3 1288 aa6.08□□□□□ -1.44
NPHP3-206ENST00000474871 PTPRKQ15262 1439 aa6.07□□□□□ -1.44
NPHP3-206ENST00000474871 MED4Q9NPJ6 270 aa6.07□□□□□ -1.44
NPHP3-206ENST00000474871 ATP2B3Q16720 1220 aa6.07□□□□□ -1.44
NPHP3-206ENST00000474871 LSM14AQ8ND56 463 aaKnown RBP6.07□□□□□ -1.44
NPHP3-206ENST00000474871 SLC39A13Q96H72 371 aa6.07□□□□□ -1.44
NPHP3-206ENST00000474871 KIAA1522Q9P206 1035 aaPredicted RBP6.07□□□□□ -1.44
NPHP3-206ENST00000474871 GIMAP6Q6P9H5 292 aa6.07□□□□□ -1.44
NPHP3-206ENST00000474871 MORC1Q86VD1 984 aa6.07□□□□□ -1.44
NPHP3-206ENST00000474871 CXorf38Q8TB03 319 aa6.07□□□□□ -1.44
NPHP3-206ENST00000474871 MYCBPQ99417 103 aaPredicted RBP6.07□□□□□ -1.44
NPHP3-206ENST00000474871 UBA5Q9GZZ9 404 aa6.07□□□□□ -1.44
NPHP3-206ENST00000474871 CWC25Q9NXE8 425 aaPredicted RBP6.07□□□□□ -1.44
NPHP3-206ENST00000474871 ERCC6L2Q5T890 1561 aa6.07□□□□□ -1.44
NPHP3-206ENST00000474871 EVA1CP58658 441 aa6.07□□□□□ -1.44
NPHP3-206ENST00000474871 RASA3Q14644 834 aa6.07□□□□□ -1.44
NPHP3-206ENST00000474871 NFKBIBQ15653 356 aa6.07□□□□□ -1.44
NPHP3-206ENST00000474871 QTRT2Q9H974 415 aaKnown RBP6.07□□□□□ -1.44
NPHP3-206ENST00000474871 CGNQ9P2M7 1197 aaKnown RBP6.07□□□□□ -1.44
NPHP3-206ENST00000474871 PARNO95453 639 aaKnown RBP6.06□□□□□ -1.44
NPHP3-206ENST00000474871 TSNAXIP1Q2TAA8 658 aa6.06□□□□□ -1.44
NPHP3-206ENST00000474871 SEZ6LQ9BYH1 1024 aa6.06□□□□□ -1.44
NPHP3-206ENST00000474871 RETREG1Q9H6L5 497 aa6.06□□□□□ -1.44
NPHP3-206ENST00000474871 ZBTB47Q9UFB7 747 aaPredicted RBP6.06□□□□□ -1.44
NPHP3-206ENST00000474871 HFM1A2PYH4 1435 aa6.06□□□□□ -1.44
NPHP3-206ENST00000474871 TROQ12816 1431 aaPredicted RBP6.06□□□□□ -1.44
NPHP3-206ENST00000474871 DNMT1P26358 1616 aaKnown RBP6.06□□□□□ -1.44
NPHP3-206ENST00000474871 KIF4AO95239 1232 aa6.06□□□□□ -1.44
NPHP3-206ENST00000474871 MKRN3Q13064 507 aaKnown RBP6.06□□□□□ -1.44
NPHP3-206ENST00000474871 AMOTQ4VCS5 1084 aa6.06□□□□□ -1.44
NPHP3-206ENST00000474871 ZNF710Q8N1W2 664 aa6.06□□□□□ -1.44
NPHP3-206ENST00000474871 CDC37Q16543 378 aaPredicted RBP6.06□□□□□ -1.44
NPHP3-206ENST00000474871 GIGYF1O75420 1035 aaPredicted RBP6.05□□□□□ -1.44
NPHP3-206ENST00000474871 MMTAG2Q9BU76 263 aaKnown RBP6.05□□□□□ -1.44
NPHP3-206ENST00000474871 CROCC2H7BZ55 1655 aa6.05□□□□□ -1.44
NPHP3-206ENST00000474871 TRIM6-TRIM34B2RNG4 842 aa6.05□□□□□ -1.44
NPHP3-206ENST00000474871 TTC30AQ86WT1 665 aa6.05□□□□□ -1.44
NPHP3-206ENST00000474871 ANKRD13AQ8IZ07 590 aa6.05□□□□□ -1.44
NPHP3-206ENST00000474871 TRIM34Q9BYJ4 488 aa6.05□□□□□ -1.44
NPHP3-206ENST00000474871 PUF60Q9UHX1 559 aaKnown RBP6.05□□□□□ -1.44
NPHP3-206ENST00000474871 CTAGE5O15320 804 aa6.05□□□□□ -1.44
NPHP3-206ENST00000474871 ECEL1O95672 775 aa6.05□□□□□ -1.44
NPHP3-206ENST00000474871 ANP32AP39687 249 aaKnown RBP6.05□□□□□ -1.44
NPHP3-206ENST00000474871 CREBRFQ8IUR6 639 aa6.05□□□□□ -1.44
NPHP3-206ENST00000474871 ATP10BO94823 1461 aa6.05□□□□□ -1.44
NPHP3-206ENST00000474871 VIRMAQ69YN4 1812 aaKnown RBP6.05□□□□□ -1.44
NPHP3-206ENST00000474871 PEX14O75381 377 aa6.05□□□□□ -1.44
NPHP3-206ENST00000474871 HDGFL1Q5TGJ6 251 aa6.05□□□□□ -1.44
NPHP3-206ENST00000474871 CCDC181Q5TID7 509 aa6.05□□□□□ -1.44
NPHP3-206ENST00000474871 HIRIP3Q9BW71 556 aaPredicted RBP6.05□□□□□ -1.44
NPHP3-206ENST00000474871 NBPF3Q9H094 633 aa6.05□□□□□ -1.44
NPHP3-206ENST00000474871 MRVI1Q9Y6F6 885 aa6.05□□□□□ -1.44
NPHP3-206ENST00000474871 SMAPO00193 183 aa6.04□□□□□ -1.44
NPHP3-206ENST00000474871 TIMM44O43615 452 aa6.04□□□□□ -1.44
NPHP3-206ENST00000474871 CHMLP26374 656 aa6.04□□□□□ -1.44
NPHP3-206ENST00000474871 DUSP27Q5VZP5 1158 aa6.04□□□□□ -1.44
NPHP3-206ENST00000474871 DUSP9Q99956 384 aaKnown RBP6.04□□□□□ -1.44
NPHP3-206ENST00000474871 CDC42BPAQ5VT25 1732 aa6.04□□□□□ -1.44
NPHP3-206ENST00000474871 TTC30BQ8N4P2 665 aa6.04□□□□□ -1.44
NPHP3-206ENST00000474871 PTPRGP23470 1445 aa6.04□□□□□ -1.44
NPHP3-206ENST00000474871 AKNAQ7Z591 1439 aa6.04□□□□□ -1.44
NPHP3-206ENST00000474871 ONECUT3O60422 494 aaPredicted RBP6.04□□□□□ -1.44
NPHP3-206ENST00000474871 ZNF853P0CG23 659 aa6.04□□□□□ -1.44
NPHP3-206ENST00000474871 HOXA10P31260 410 aaPredicted RBP6.04□□□□□ -1.44
NPHP3-206ENST00000474871 CCDC15Q0P6D6 951 aa6.04□□□□□ -1.44
NPHP3-206ENST00000474871 ZFYVE27Q5T4F4 411 aa6.04□□□□□ -1.44
NPHP3-206ENST00000474871 TEX13AQ9BXU3 409 aaPredicted RBP6.04□□□□□ -1.44
NPHP3-206ENST00000474871 ABCC10Q5T3U5 1492 aa6.04□□□□□ -1.44
NPHP3-206ENST00000474871 ABCC2Q92887 1545 aa6.04□□□□□ -1.44
NPHP3-206ENST00000474871 TRPC1P48995 793 aa6.03□□□□□ -1.44
NPHP3-206ENST00000474871 NEUROD2Q15784 382 aa6.03□□□□□ -1.44
NPHP3-206ENST00000474871 PKN1Q16512 942 aa6.03□□□□□ -1.44
NPHP3-206ENST00000474871 SMC5Q8IY18 1101 aa6.03□□□□□ -1.44
NPHP3-206ENST00000474871 GNL3LQ9NVN8 582 aaKnown RBP6.03□□□□□ -1.44
NPHP3-206ENST00000474871 KLHL42Q9P2K6 505 aa6.03□□□□□ -1.44
NPHP3-206ENST00000474871 NAIPQ13075 1403 aa6.03□□□□□ -1.44
NPHP3-206ENST00000474871 CAMSAP2Q08AD1 1489 aa6.03□□□□□ -1.44
NPHP3-206ENST00000474871 ADGBQ8N7X0 1667 aa6.03□□□□□ -1.44
NPHP3-206ENST00000474871 PPP1R12AO14974 1030 aaPredicted RBP6.03□□□□□ -1.44
NPHP3-206ENST00000474871 C4orf46Q504U0 113 aa6.03□□□□□ -1.44
NPHP3-206ENST00000474871 ELOA2Q8IYF1 753 aaPredicted RBP6.03□□□□□ -1.44
NPHP3-206ENST00000474871 GPATCH8Q9UKJ3 1502 aaKnown RBP6.03□□□□□ -1.44
NPHP3-206ENST00000474871 DAPK1P53355 1430 aa6.03□□□□□ -1.44
NPHP3-206ENST00000474871 UACAQ9BZF9 1416 aa6.03□□□□□ -1.44
NPHP3-206ENST00000474871 XRCC6P12956 609 aaKnown RBP eCLIP6.03□□□□□ -1.44
NPHP3-206ENST00000474871 ENPP1P22413 925 aa6.03□□□□□ -1.44
NPHP3-206ENST00000474871 TBC1D25Q3MII6 688 aa6.03□□□□□ -1.44
NPHP3-206ENST00000474871 PAXBP1Q9Y5B6 917 aa6.03□□□□□ -1.44
NPHP3-206ENST00000474871 IL16Q14005 1332 aa6.03□□□□□ -1.44
NPHP3-206ENST00000474871 KIF1CO43896 1103 aaKnown RBP6.03□□□□□ -1.44
NPHP3-206ENST00000474871 GUCY2CP25092 1073 aa6.03□□□□□ -1.44
NPHP3-206ENST00000474871 CYB5RLQ6IPT4 315 aa6.03□□□□□ -1.44
NPHP3-206ENST00000474871 C11orf96Q7Z7L8 435 aa6.03□□□□□ -1.44
NPHP3-206ENST00000474871 VTI1AQ96AJ9 217 aa6.03□□□□□ -1.44
NPHP3-206ENST00000474871 KDM6BO15054 1643 aa6.02□□□□□ -1.44
NPHP3-206ENST00000474871 ANKRD18BA2A2Z9 1011 aa6.02□□□□□ -1.45
NPHP3-206ENST00000474871 CREB3O43889 395 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms