RNA–Protein interactions for RNA: ENST00000474348.5

RNF13-212, Transcript of ring finger protein 13, humanhuman

TSL 5

Gene RNF13, Length 1,027 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13-212ENST00000474348 CABP2Q9NPB3 220 aa13.12□□□□□ -0.31
RNF13-212ENST00000474348 AXIN2Q9Y2T1 843 aa13.12□□□□□ -0.31
RNF13-212ENST00000474348 BRD4O60885 1362 aaPredicted RBP13.11□□□□□ -0.31
RNF13-212ENST00000474348 ARXQ96QS3 562 aa13.11□□□□□ -0.31
RNF13-212ENST00000474348 COL5A2P05997 1499 aaPredicted RBP13.1□□□□□ -0.31
RNF13-212ENST00000474348 CARD10Q9BWT7 1032 aa13.1□□□□□ -0.31
RNF13-212ENST00000474348 WDR17Q8IZU2 1322 aa13.1□□□□□ -0.31
RNF13-212ENST00000474348 RAB3GAP2Q9H2M9 1393 aa13.09□□□□□ -0.31
RNF13-212ENST00000474348 GPR162Q16538 588 aa13.09□□□□□ -0.31
RNF13-212ENST00000474348 NBPF1Q3BBV0 1214 aa13.09□□□□□ -0.31
RNF13-212ENST00000474348 NUP188Q5SRE5 1749 aa13.09□□□□□ -0.31
RNF13-212ENST00000474348 KCNH5Q8NCM2 988 aa13.09□□□□□ -0.31
RNF13-212ENST00000474348 RREB1Q92766 1687 aa13.08□□□□□ -0.31
RNF13-212ENST00000474348 CRYBG1Q9Y4K1 1723 aa13.08□□□□□ -0.32
RNF13-212ENST00000474348 PPIP5K1Q6PFW1 1433 aa13.08□□□□□ -0.32
RNF13-212ENST00000474348 ARHGEF25Q86VW2 580 aa13.08□□□□□ -0.32
RNF13-212ENST00000474348 SGIP1Q9BQI5 828 aa13.07□□□□□ -0.32
RNF13-212ENST00000474348 ZNF692Q9BU19 519 aaPredicted RBP13.07□□□□□ -0.32
RNF13-212ENST00000474348 CENPJQ9HC77 1338 aaPredicted RBP13.07□□□□□ -0.32
RNF13-212ENST00000474348 BCL9O00512 1426 aa13.06□□□□□ -0.32
RNF13-212ENST00000474348 SOX12O15370 315 aa13.06□□□□□ -0.32
RNF13-212ENST00000474348 PHRF1Q9P1Y6 1649 aaKnown RBP13.06□□□□□ -0.32
RNF13-212ENST00000474348 IFFO2Q5TF58 517 aa13.05□□□□□ -0.32
RNF13-212ENST00000474348 ACSBG1Q96GR2 724 aa13.05□□□□□ -0.32
RNF13-212ENST00000474348 UTRNP46939 3433 aa13.04□□□□□ -0.32
RNF13-212ENST00000474348 GIGYF1O75420 1035 aaPredicted RBP13.04□□□□□ -0.32
RNF13-212ENST00000474348 NRKQ7Z2Y5 1582 aa13.03□□□□□ -0.32
RNF13-212ENST00000474348 LMO7Q8WWI1 1683 aa13.03□□□□□ -0.32
RNF13-212ENST00000474348 PELP1Q8IZL8 1130 aaKnown RBP13.03□□□□□ -0.32
RNF13-212ENST00000474348 CNKSR2Q8WXI2 1034 aa13.03□□□□□ -0.32
RNF13-212ENST00000474348 ITSN1Q15811 1721 aa13.02□□□□□ -0.32
RNF13-212ENST00000474348 POLD1P28340 1107 aa13.02□□□□□ -0.33
RNF13-212ENST00000474348 KLHL34Q8N239 644 aa13.02□□□□□ -0.33
RNF13-212ENST00000474348 SLC16A10Q8TF71 515 aa13.02□□□□□ -0.33
RNF13-212ENST00000474348 EVC2Q86UK5 1308 aa13.02□□□□□ -0.33
RNF13-212ENST00000474348 USP6P35125 1406 aa13.02□□□□□ -0.33
RNF13-212ENST00000474348 PARP4Q9UKK3 1724 aaKnown RBP13.02□□□□□ -0.33
RNF13-212ENST00000474348 NLRP2Q9NX02 1062 aa13.01□□□□□ -0.33
RNF13-212ENST00000474348 TTC21BQ7Z4L5 1316 aa13.01□□□□□ -0.33
RNF13-212ENST00000474348 CCDC7Q96M83 1385 aa13.01□□□□□ -0.33
RNF13-212ENST00000474348 PEAK1Q9H792 1746 aa12.99□□□□□ -0.33
RNF13-212ENST00000474348 MAP3K5Q99683 1374 aa12.99□□□□□ -0.33
RNF13-212ENST00000474348 IL2RBP14784 551 aa12.99□□□□□ -0.33
RNF13-212ENST00000474348 CPSF1Q10570 1443 aaKnown RBP12.98□□□□□ -0.33
RNF13-212ENST00000474348 TTC21AQ8NDW8 1320 aa12.98□□□□□ -0.33
RNF13-212ENST00000474348 GRIN3BO60391 1043 aa12.98□□□□□ -0.33
RNF13-212ENST00000474348 LRRC4BQ9NT99 713 aa12.98□□□□□ -0.33
RNF13-212ENST00000474348 TFCP2L1Q9NZI6 479 aa12.98□□□□□ -0.33
RNF13-212ENST00000474348 CASZ1Q86V15 1759 aa12.97□□□□□ -0.33
RNF13-212ENST00000474348 ZNF827Q17R98 1081 aa12.97□□□□□ -0.33
RNF13-212ENST00000474348 SLC27A3Q5K4L6 730 aa12.97□□□□□ -0.33
RNF13-212ENST00000474348 ARHGEF28Q8N1W1 1705 aaKnown RBP12.96□□□□□ -0.33
RNF13-212ENST00000474348 DDX54Q8TDD1 881 aaKnown RBP12.96□□□□□ -0.33
RNF13-212ENST00000474348 AKT1S1Q96B36 256 aa12.96□□□□□ -0.33
RNF13-212ENST00000474348 SLIT3O75094 1523 aa12.96□□□□□ -0.33
RNF13-212ENST00000474348 MYOM1P52179 1685 aa12.96□□□□□ -0.34
RNF13-212ENST00000474348 RGPD3A6NKT7 1758 aaPredicted RBP12.95□□□□□ -0.34
RNF13-212ENST00000474348 RGPD4Q7Z3J3 1758 aa12.95□□□□□ -0.34
RNF13-212ENST00000474348 NCBP3Q53F19 620 aaKnown RBP12.95□□□□□ -0.34
RNF13-212ENST00000474348 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.95□□□□□ -0.34
RNF13-212ENST00000474348 TOPAZ1Q8N9V7 1692 aa12.94□□□□□ -0.34
RNF13-212ENST00000474348 LRRC37A3O60309 1634 aa12.94□□□□□ -0.34
RNF13-212ENST00000474348 KTN1Q86UP2 1357 aaKnown RBP12.94□□□□□ -0.34
RNF13-212ENST00000474348 ANKRD24Q8TF21 1146 aa12.93□□□□□ -0.34
RNF13-212ENST00000474348 SYTL4Q96C24 671 aaPredicted RBP12.93□□□□□ -0.34
RNF13-212ENST00000474348 SBF2Q86WG5 1849 aa12.92□□□□□ -0.34
RNF13-212ENST00000474348 ERBB3P21860 1342 aa12.92□□□□□ -0.34
RNF13-212ENST00000474348 NLGN2Q8NFZ4 835 aa12.92□□□□□ -0.34
RNF13-212ENST00000474348 PNPLA7Q6ZV29 1317 aa12.91□□□□□ -0.34
RNF13-212ENST00000474348 TNS2Q63HR2 1409 aa12.91□□□□□ -0.34
RNF13-212ENST00000474348 HOXD11P31277 338 aaPredicted RBP12.91□□□□□ -0.34
RNF13-212ENST00000474348 PRIM1P49642 420 aaKnown RBP12.91□□□□□ -0.34
RNF13-212ENST00000474348 KCNQ4P56696 695 aa12.91□□□□□ -0.34
RNF13-212ENST00000474348 COL18A1P39060 1754 aa12.9□□□□□ -0.34
RNF13-212ENST00000474348 L3MBTL2Q969R5 705 aa12.9□□□□□ -0.34
RNF13-212ENST00000474348 NPM3O75607 178 aaKnown RBP12.89□□□□□ -0.35
RNF13-212ENST00000474348 YBX3P16989 372 aaKnown RBP eCLIP12.89□□□□□ -0.35
RNF13-212ENST00000474348 NME9Q86XW9 330 aa12.89□□□□□ -0.35
RNF13-212ENST00000474348 TMC1Q8TDI8 760 aa12.89□□□□□ -0.35
RNF13-212ENST00000474348 GPBP1L1Q9HC44 474 aaPredicted RBP12.89□□□□□ -0.35
RNF13-212ENST00000474348 HDGFL2Q7Z4V5 671 aaPredicted RBP12.88□□□□□ -0.35
RNF13-212ENST00000474348 LTV1Q96GA3 475 aaPredicted RBP12.88□□□□□ -0.35
RNF13-212ENST00000474348 CEP350Q5VT06 3117 aa12.88□□□□□ -0.35
RNF13-212ENST00000474348 USP31Q70CQ4 1352 aa12.87□□□□□ -0.35
RNF13-212ENST00000474348 HMGB2P26583 209 aaKnown RBP12.87□□□□□ -0.35
RNF13-212ENST00000474348 IP6K1Q92551 441 aa12.87□□□□□ -0.35
RNF13-212ENST00000474348 CCNL1Q9UK58 526 aaPredicted RBP12.87□□□□□ -0.35
RNF13-212ENST00000474348 COL23A1Q86Y22 540 aaPredicted RBP12.86□□□□□ -0.35
RNF13-212ENST00000474348 ZCRB1Q8TBF4 217 aaKnown RBP12.86□□□□□ -0.35
RNF13-212ENST00000474348 RNF216Q9NWF9 866 aaPredicted RBP12.86□□□□□ -0.35
RNF13-212ENST00000474348 CD2APQ9Y5K6 639 aa12.86□□□□□ -0.35
RNF13-212ENST00000474348 CHD4Q14839 1912 aa12.86□□□□□ -0.35
RNF13-212ENST00000474348 KIAA1210Q9ULL0 1709 aa12.85□□□□□ -0.35
RNF13-212ENST00000474348 HSPA6P17066 643 aa12.85□□□□□ -0.35
RNF13-212ENST00000474348 ROCK2O75116 1388 aaKnown RBP12.84□□□□□ -0.35
RNF13-212ENST00000474348 PIK3C2AO00443 1686 aa12.84□□□□□ -0.35
RNF13-212ENST00000474348 FLAD1Q8NFF5 587 aa12.84□□□□□ -0.35
RNF13-212ENST00000474348 SLC12A5Q9H2X9 1139 aa12.84□□□□□ -0.35
RNF13-212ENST00000474348 TERF2IPQ9NYB0 399 aa12.84□□□□□ -0.35
RNF13-212ENST00000474348 AKAP12Q02952 1782 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms