RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 C1orf115Q9H7X2 142 aa13.83□□□□□ -0.2
C9orf3-214ENST00000473778 PPIP5K1Q6PFW1 1433 aa13.83□□□□□ -0.2
C9orf3-214ENST00000473778 TSPOAP1O95153 1857 aa13.83□□□□□ -0.2
C9orf3-214ENST00000473778 DLC1Q96QB1 1528 aa13.82□□□□□ -0.2
C9orf3-214ENST00000473778 ELL2O00472 640 aaPredicted RBP13.82□□□□□ -0.2
C9orf3-214ENST00000473778 VAMP4O75379 141 aa13.82□□□□□ -0.2
C9orf3-214ENST00000473778 CPSF1Q10570 1443 aaKnown RBP13.82□□□□□ -0.2
C9orf3-214ENST00000473778 IL13P35225 146 aa13.82□□□□□ -0.2
C9orf3-214ENST00000473778 ZBTB7BO15156 539 aaPredicted RBP13.81□□□□□ -0.2
C9orf3-214ENST00000473778 NFE2L2Q16236 605 aa13.81□□□□□ -0.2
C9orf3-214ENST00000473778 CPS1P31327 1500 aa13.81□□□□□ -0.2
C9orf3-214ENST00000473778 RIMS2Q9UQ26 1411 aa13.81□□□□□ -0.2
C9orf3-214ENST00000473778 METP08581 1390 aa13.81□□□□□ -0.2
C9orf3-214ENST00000473778 SPATA31D1Q6ZQQ2 1576 aa13.8□□□□□ -0.2
C9orf3-214ENST00000473778 FAM83GA6ND36 823 aa13.8□□□□□ -0.2
C9orf3-214ENST00000473778 IPO8O15397 1037 aaKnown RBP13.8□□□□□ -0.2
C9orf3-214ENST00000473778 BRPF1P55201 1214 aaPredicted RBP13.8□□□□□ -0.2
C9orf3-214ENST00000473778 SIRT2Q8IXJ6 389 aa13.8□□□□□ -0.2
C9orf3-214ENST00000473778 MRPL50Q8N5N7 158 aaKnown RBP13.8□□□□□ -0.2
C9orf3-214ENST00000473778 MBIPQ9NS73 344 aa13.8□□□□□ -0.2
C9orf3-214ENST00000473778 RRS1Q15050 365 aaKnown RBP13.8□□□□□ -0.2
C9orf3-214ENST00000473778 ZNF853P0CG23 659 aa13.79□□□□□ -0.2
C9orf3-214ENST00000473778 CHD1LQ86WJ1 897 aa13.79□□□□□ -0.2
C9orf3-214ENST00000473778 PNNQ9H307 717 aaKnown RBP13.79□□□□□ -0.2
C9orf3-214ENST00000473778 PTCH1Q13635 1447 aa13.79□□□□□ -0.2
C9orf3-214ENST00000473778 ZNF692Q9BU19 519 aaPredicted RBP13.79□□□□□ -0.2
C9orf3-214ENST00000473778 WASLO00401 505 aaPredicted RBP13.78□□□□□ -0.2
C9orf3-214ENST00000473778 MLECQ14165 292 aa13.78□□□□□ -0.2
C9orf3-214ENST00000473778 EDC4Q6P2E9 1401 aaKnown RBP13.78□□□□□ -0.2
C9orf3-214ENST00000473778 TXNDC2Q86VQ3 553 aa13.78□□□□□ -0.2
C9orf3-214ENST00000473778 C8orf58Q8NAV2 365 aa13.78□□□□□ -0.2
C9orf3-214ENST00000473778 PIK3R4Q99570 1358 aa13.78□□□□□ -0.2
C9orf3-214ENST00000473778 CDK12Q9NYV4 1490 aaPredicted RBP13.78□□□□□ -0.2
C9orf3-214ENST00000473778 KNDC1Q76NI1 1749 aa13.78□□□□□ -0.2
C9orf3-214ENST00000473778 FAM69CQ0P6D2 419 aa13.78□□□□□ -0.2
C9orf3-214ENST00000473778 DCTN1Q14203 1278 aa13.78□□□□□ -0.2
C9orf3-214ENST00000473778 DIP2BQ9P265 1576 aa13.77□□□□□ -0.2
C9orf3-214ENST00000473778 MON2Q7Z3U7 1717 aa13.77□□□□□ -0.21
C9orf3-214ENST00000473778 KIF2CQ99661 725 aa13.76□□□□□ -0.21
C9orf3-214ENST00000473778 IFT57Q9NWB7 429 aa13.76□□□□□ -0.21
C9orf3-214ENST00000473778 ABCC4O15439 1325 aa13.76□□□□□ -0.21
C9orf3-214ENST00000473778 REREQ9P2R6 1566 aa13.75□□□□□ -0.21
C9orf3-214ENST00000473778 RBM25P49756 843 aaKnown RBP13.75□□□□□ -0.21
C9orf3-214ENST00000473778 ANKRD45Q5TZF3 282 aa13.75□□□□□ -0.21
C9orf3-214ENST00000473778 AGLP35573 1532 aa13.75□□□□□ -0.21
C9orf3-214ENST00000473778 NCOA3Q9Y6Q9 1424 aa13.75□□□□□ -0.21
C9orf3-214ENST00000473778 C3P01024 1663 aa13.75□□□□□ -0.21
C9orf3-214ENST00000473778 MCM4P33991 863 aa13.75□□□□□ -0.21
C9orf3-214ENST00000473778 DDIT3P35638 169 aa13.75□□□□□ -0.21
C9orf3-214ENST00000473778 TWISTNBQ3B726 338 aaPredicted RBP13.75□□□□□ -0.21
C9orf3-214ENST00000473778 ZNF428Q96B54 188 aa13.75□□□□□ -0.21
C9orf3-214ENST00000473778 NUDT16Q96DE0 195 aaKnown RBP13.75□□□□□ -0.21
C9orf3-214ENST00000473778 CD2BP2O95400 341 aaKnown RBP13.74□□□□□ -0.21
C9orf3-214ENST00000473778 ARHGAP45Q92619 1136 aa13.74□□□□□ -0.21
C9orf3-214ENST00000473778 PRR36Q9H6K5 1346 aa13.74□□□□□ -0.21
C9orf3-214ENST00000473778 AKAP12Q02952 1782 aa13.74□□□□□ -0.21
C9orf3-214ENST00000473778 AATKQ6ZMQ8 1374 aa13.74□□□□□ -0.21
C9orf3-214ENST00000473778 GNAI1P63096 354 aa13.74□□□□□ -0.21
C9orf3-214ENST00000473778 KRT24Q2M2I5 525 aa13.74□□□□□ -0.21
C9orf3-214ENST00000473778 BMP2KLQ5H9B9 411 aa13.74□□□□□ -0.21
C9orf3-214ENST00000473778 AEBP1Q8IUX7 1158 aa13.74□□□□□ -0.21
C9orf3-214ENST00000473778 CFAP44Q96MT7 982 aa13.73□□□□□ -0.21
C9orf3-214ENST00000473778 ARXQ96QS3 562 aa13.73□□□□□ -0.21
C9orf3-214ENST00000473778 GZF1Q9H116 711 aaPredicted RBP13.73□□□□□ -0.21
C9orf3-214ENST00000473778 CHMP5Q9NZZ3 219 aa13.72□□□□□ -0.21
C9orf3-214ENST00000473778 TBC1D9Q6ZT07 1266 aa13.71□□□□□ -0.21
C9orf3-214ENST00000473778 GCC1Q96CN9 775 aa13.71□□□□□ -0.21
C9orf3-214ENST00000473778 COG3Q96JB2 828 aa13.71□□□□□ -0.21
C9orf3-214ENST00000473778 CCDC61Q9Y6R9 512 aa13.71□□□□□ -0.21
C9orf3-214ENST00000473778 HSCBQ8IWL3 235 aa13.71□□□□□ -0.22
C9orf3-214ENST00000473778 RBM42Q9BTD8 480 aaKnown RBP13.71□□□□□ -0.22
C9orf3-214ENST00000473778 ITSN1Q15811 1721 aa13.71□□□□□ -0.22
C9orf3-214ENST00000473778 RGS12O14924 1447 aa13.7□□□□□ -0.22
C9orf3-214ENST00000473778 GSPT1P15170 499 aaKnown RBP13.69□□□□□ -0.22
C9orf3-214ENST00000473778 NRKQ7Z2Y5 1582 aa13.69□□□□□ -0.22
C9orf3-214ENST00000473778 FSD2A1L4K1 749 aa13.69□□□□□ -0.22
C9orf3-214ENST00000473778 XRCC6P12956 609 aaKnown RBP eCLIP13.69□□□□□ -0.22
C9orf3-214ENST00000473778 CALD1Q05682 793 aaKnown RBP13.69□□□□□ -0.22
C9orf3-214ENST00000473778 SNX21Q969T3 373 aa13.69□□□□□ -0.22
C9orf3-214ENST00000473778 PEAK1Q9H792 1746 aa13.69□□□□□ -0.22
C9orf3-214ENST00000473778 TECPR2O15040 1411 aa13.68□□□□□ -0.22
C9orf3-214ENST00000473778 ROBO2Q9HCK4 1378 aa13.68□□□□□ -0.22
C9orf3-214ENST00000473778 EIF4A2Q14240 407 aaKnown RBP13.68□□□□□ -0.22
C9orf3-214ENST00000473778 PANK2Q9BZ23 570 aa13.68□□□□□ -0.22
C9orf3-214ENST00000473778 TRAK2O60296 914 aa13.68□□□□□ -0.22
C9orf3-214ENST00000473778 GLIPR1L2Q4G1C9 344 aa13.68□□□□□ -0.22
C9orf3-214ENST00000473778 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.67□□□□□ -0.22
C9orf3-214ENST00000473778 NUTM2FA1L443 756 aa13.67□□□□□ -0.22
C9orf3-214ENST00000473778 C16orf71Q8IYS4 520 aaPredicted RBP13.67□□□□□ -0.22
C9orf3-214ENST00000473778 ATP10DQ9P241 1426 aa13.67□□□□□ -0.22
C9orf3-214ENST00000473778 SULT6B1Q6IMI4 303 aa13.67□□□□□ -0.22
C9orf3-214ENST00000473778 MCM10Q7L590 875 aa13.67□□□□□ -0.22
C9orf3-214ENST00000473778 OTUD7AQ8TE49 926 aaPredicted RBP13.66□□□□□ -0.22
C9orf3-214ENST00000473778 FOXD4L1Q9NU39 408 aa13.66□□□□□ -0.22
C9orf3-214ENST00000473778 PLEKHM2Q8IWE5 1019 aa13.66□□□□□ -0.22
C9orf3-214ENST00000473778 TNPO1Q92973 898 aaKnown RBP13.66□□□□□ -0.22
C9orf3-214ENST00000473778 AK9Q5TCS8 1911 aa13.65□□□□□ -0.22
C9orf3-214ENST00000473778 HSP90AB2PQ58FF8 381 aa13.65□□□□□ -0.22
C9orf3-214ENST00000473778 RRAGDQ9NQL2 400 aaPredicted RBP13.65□□□□□ -0.22
C9orf3-214ENST00000473778 RIMS1Q86UR5 1692 aaKnown RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms